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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF COXSACKIEVIRUS A21
Keywords PICORNAVIRUS, COXSACKIEVIRUS, A21, CAPSID PROTEIN, VIRAL PRO ICOSAHEDRAL VIRUS, VIRUS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Z7S     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HUMAN COXSACKIEVIRUS A21  1 283 2229 0
2  Protein   HUMAN COXSACKIEVIRUS A21  2 267 2069 0
3  Protein   HUMAN COXSACKIEVIRUS A21  3 239 1846 0
4  Protein   HUMAN COXSACKIEVIRUS A21  4 68 513 0
5  Ligand   HUMAN COXSACKIEVIRUS A21  1 2 0 17
6  RNA    2 1 0 23
7  Ligand   HUMAN COXSACKIEVIRUS A21  4 1 0 15
8 Water     53 0 53
total       914 6657 108

Proteins
Unit 1 VAL16 SER17 GLN18 PRO19 PRO20 SER21 THR22 GLN23 SER24 THR25 GLU26 ALA27 THR28 SER29 GLY30 VAL31 ASN32 SER33 GLN34 GLU35 VAL36 PRO37 ALA38 LEU39 THR40 ALA41 VAL42 GLU43 THR44 GLY45 ALA46 SER47 GLY48 GLN49 ALA50 ILE51 PRO52 SER53 ASP54 VAL55 VAL56 GLU57 THR58 ARG59 HIS60 VAL61 VAL62 ASN63 TYR64 LYS65 THR66 ARG67 SER68 GLU69 SER70 CYS71 LEU72 GLU73 SER74 PHE75 PHE76 GLY77 ARG78 ALA79 ALA80 CYS81 VAL82 THR83 ILE84 LEU85 SER86 LEU87 THR88 ASN89 SER90 SER91 LYS92 SER93 GLY94 GLU95 GLU96 LYS97 LYS98 HIS99 PHE100 ASN101 ILE102 TRP103 ASN104 ILE105 THR106 TYR107 THR108 ASP109 THR110 VAL111 GLN112 LEU113 ARG114 ARG115 LYS116 LEU117 GLU118 PHE119 PHE120 THR121 TYR122 SER123 ARG124 PHE125 ASP126 LEU127 GLU128 MET129 THR130 PHE131 VAL132 PHE133 THR134 GLU135 ASN136 TYR137 PRO138 SER139 THR140 ALA141 SER142 GLY143 GLU144 VAL145 ARG146 ASN147 GLN148 VAL149 TYR150 GLN151 ILE152 MET153 TYR154 ILE155 PRO156 PRO157 GLY158 ALA159 PRO160 ARG161 PRO162 SER163 SER164 TRP165 ASP166 ASP167 TYR168 THR169 TRP170 GLN171 SER172 SER173 SER174 ASN175 PRO176 SER177 ILE178 PHE179 TYR180 MET181 TYR182 GLY183 ASN184 ALA185 PRO186 PRO187 ARG188 MET189 SER190 ILE191 PRO192 TYR193 VAL194 GLY195 ILE196 ALA197 ASN198 ALA199 TYR200 SER201 HIS202 PHE203 TYR204 ASP205 GLY206 PHE207 ALA208 ARG209 VAL210 PRO211 LEU212 GLU213 GLY214 GLU215 ASN216 THR217 ASP218 ALA219 GLY220 ASP221 THR222 PHE223 TYR224 GLY225 LEU226 VAL227 SER228 ILE229 ASN230 ASP231 PHE232 GLY233 VAL234 LEU235 ALA236 VAL237 ARG238 ALA239 VAL240 ASN241 ARG242 SER243 ASN244 PRO245 HIS246 THR247 ILE248 HIS249 THR250 SER251 VAL252 ARG253 VAL254 TYR255 MET256 LYS257 PRO258 LYS259 HIS260 ILE261 ARG262 CYS263 TRP264 CYS265 PRO266 ARG267 PRO268 PRO269 ARG270 ALA271 VAL272 LEU273 TYR274 ARG275 GLY276 GLU277 GLY278 VAL279 ASP280 MET281 ILE282 SER283 SER284 ALA285 ILE286 LEU287 PRO288 LEU289 THR290 LYS291 VAL292 ASP293 SER294 ILE295 THR296 THR297 PHE298
Unit 2 ALA6 CYS7 GLY8 TYR9 SER10 ASP11 ARG12 VAL13 ARG14 GLN15 ILE16 THR17 LEU18 GLY19 ASN20 SER21 THR22 ILE23 THR24 THR25 GLN26 GLU27 ALA28 ALA29 ASN30 ALA31 ILE32 VAL33 ALA34 TYR35 GLY36 GLU37 TRP38 PRO39 THR40 TYR41 ILE42 ASN43 ASP44 SER45 GLU46 ALA47 ASN48 PRO49 VAL50 ASP51 ALA52 PRO53 THR54 GLU55 PRO56 ASP57 VAL58 SER59 SER60 ASN61 ARG62 PHE63 TYR64 THR65 LEU66 GLU67 SER68 VAL69 SER70 TRP71 LYS72 THR73 THR74 SER75 ARG76 GLY77 TRP78 TRP79 TRP80 LYS81 LEU82 PRO83 ASP84 CYS85 LEU86 LYS87 ASP88 MET89 GLY90 MET91 PHE92 GLY93 GLN94 ASN95 MET96 TYR97 TYR98 HIS99 TYR100 LEU101 GLY102 ARG103 SER104 GLY105 TYR106 THR107 ILE108 HIS109 VAL110 GLN111 CYS112 ASN113 ALA114 SER115 LYS116 PHE117 HIS118 GLN119 GLY120 ALA121 LEU122 GLY123 VAL124 PHE125 LEU126 ILE127 PRO128 GLU129 PHE130 VAL131 MET132 ALA133 CYS134 ASN135 THR136 GLU137 SER138 LYS139 THR140 SER141 TYR142 VAL143 SER144 TYR145 ILE146 ASN147 ALA148 ASN149 PRO150 GLY151 GLU152 ARG153 GLY154 GLY155 GLU156 PHE157 THR158 ASN159 THR160 TYR161 ASN162 PRO163 SER164 ASN165 THR166 ASP167 ALA168 SER169 GLU170 GLY171 ARG172 LYS173 PHE174 ALA175 ALA176 LEU177 ASP178 TYR179 LEU180 LEU181 GLY182 SER183 GLY184 VAL185 LEU186 ALA187 GLY188 ASN189 ALA190 PHE191 VAL192 TYR193 PRO194 HIS195 GLN196 ILE197 ILE198 ASN199 LEU200 ARG201 THR202 ASN203 ASN204 SER205 ALA206 THR207 ILE208 VAL209 VAL210 PRO211 TYR212 VAL213 ASN214 SER215 LEU216 VAL217 ILE218 ASP219 CYS220 MET221 ALA222 LYS223 HIS224 ASN225 ASN226 TRP227 GLY228 ILE229 VAL230 ILE231 LEU232 PRO233 LEU234 ALA235 PRO236 LEU237 ALA238 PHE239 ALA240 ALA241 THR242 SER243 SER244 PRO245 GLN246 VAL247 PRO248 ILE249 THR250 VAL251 THR252 ILE253 ALA254 PRO255 MET256 CYS257 THR258 GLU259 PHE260 ASN261 GLY262 LEU263 ARG264 ASN265 ILE266 THR267 VAL268 PRO269 VAL270 HIS271 GLN272
Unit 3 GLY1 LEU2 PRO3 THR4 MET5 ASN6 THR7 PRO8 GLY9 SER10 ASN11 GLN12 PHE13 LEU14 THR15 SER16 ASP17 ASP18 PHE19 GLN20 SER21 PRO22 CYS23 ALA24 LEU25 PRO26 ASN27 PHE28 ASP29 VAL30 THR31 PRO32 PRO33 ILE34 HIS35 ILE36 PRO37 GLY38 GLU39 VAL40 LYS41 ASN42 MET43 MET44 GLU45 LEU46 ALA47 GLU48 ILE49 ASP50 THR51 LEU52 ILE53 PRO54 MET55 ASN56 ALA57 VAL58 ASP59 GLY60 LYS61 VAL62 ASN63 THR64 MET65 GLU66 MET67 TYR68 GLN69 ILE70 PRO71 LEU72 ASN73 ASP74 ASN75 LEU76 SER77 LYS78 ALA79 PRO80 ILE81 PHE82 CYS83 LEU84 SER85 LEU86 SER87 PRO88 ALA89 SER90 ASP91 LYS92 ARG93 LEU94 SER95 HIS96 THR97 MET98 LEU99 GLY100 GLU101 ILE102 LEU103 ASN104 TYR105 TYR106 THR107 HIS108 TRP109 THR110 GLY111 SER112 ILE113 ARG114 PHE115 THR116 PHE117 LEU118 PHE119 CYS120 GLY121 SER122 MET123 MET124 ALA125 THR126 GLY127 LYS128 LEU129 LEU130 LEU131 SER132 TYR133 SER134 PRO135 PRO136 GLY137 ALA138 LYS139 PRO140 PRO141 THR142 ASN143 ARG144 LYS145 ASP146 ALA147 MET148 LEU149 GLY150 THR151 HIS152 ILE153 ILE154 TRP155 ASP156 LEU157 GLY158 LEU159 GLN160 SER161 SER162 CYS163 SER164 MET165 VAL166 ALA167 PRO168 TRP169 ILE170 SER171 ASN172 THR173 VAL174 TYR175 ARG176 ARG177 CYS178 ALA179 ARG180 ASP181 ASP182 PHE183 THR184 GLU185 GLY186 GLY187 PHE188 ILE189 THR190 CYS191 PHE192 TYR193 GLN194 THR195 ARG196 ILE197 VAL198 VAL199 PRO200 ALA201 SER202 THR203 PRO204 THR205 SER206 MET207 PHE208 MET209 LEU210 GLY211 PHE212 VAL213 SER214 ALA215 CYS216 PRO217 ASP218 PHE219 SER220 VAL221 ARG222 LEU223 LEU224 LYS225 ASP226 THR227 PRO228 HIS229 ILE230 SER231 GLN232 SER233 LYS234 LEU235 ILE236 GLY237 ARG238 THR239
Unit 4 GLY2 ALA3 GLN4 VAL5 SER6 THR7 GLN8 LYS9 THR10 GLY11 ALA12 HIS13 GLU14 ASN15 GLN16 ASN17 VAL18 ALA19 ALA20 ASN21 GLY22 SER23 THR24 ILE25 ASN26 TYR27 THR28 THR29 ILE30 ASN31 TYR32 TYR33 LYS34 ASP35 SER36 ALA37 SER38 ASN39 SER40 ALA41 THR42 ARG43 GLN44 ASP45 LEU46 SER47 GLN48 ASP49 PRO50 SER51 LYS52 PHE53 THR54 GLU55 PRO56 VAL57 LYS58 ASP59 LEU60 MET61 LEU62 LYS63 THR64 ALA65 PRO66 ALA67 LEU68 ASN69

Nucleic acids
Unit 6 G273

Ligands
Unit 5 CA299 MYR300
Unit 7 MYR1

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany