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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE (MER) IN COMPLEX WITH COENZYME F420
Keywords (ALPHA, BETA)8 BARREL, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1Z69     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  A 327 2421 0
2  Protein   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  B 327 2421 0
3  Protein   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  C 327 2421 0
4  Protein   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  D 327 2421 0
5  Ligand   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  A 1 0 53
6  Ligand   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  B 2 0 54
7  Ligand   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  C 1 0 53
8  Ligand   COENZYME F420-DEPENDENT N(5),N(10)- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  D 3 0 71
9 Water     239 0 239
total       1554 9684 470
Proteins
Unit 1 MET1 LYS2 PHE3 GLY4 ILE5 GLU6 PHE7 VAL8 PRO9 SER10 ASP11 PRO12 ALA13 LEU14 LYS15 ILE16 ALA17 TYR18 TYR19 ALA20 LYS21 LEU22 SER23 GLU24 GLN25 GLN26 GLY27 PHE28 ASP29 HIS30 VAL31 TRP32 ILE33 THR34 ASP35 HIS36 TYR37 ASN38 ASN39 ARG40 ASP41 VAL42 TYR43 SER44 THR45 LEU46 THR47 VAL48 LEU49 ALA50 LEU51 ASN52 THR53 ASN54 SER55 ILE56 LYS57 ILE58 GLY59 PRO60 GLY61 VAL62 THR63 ASN64 SER65 TYR66 THR67 ARG68 ASN69 PRO70 ALA71 ILE72 THR73 ALA74 SER75 SER76 ILE77 ALA78 SER79 ILE80 ALA81 GLU82 ILE83 SER84 GLY85 GLY86 ARG87 ALA88 VAL89 LEU90 GLY91 LEU92 GLY93 PRO94 GLY95 ASP96 LYS97 ALA98 THR99 PHE100 ASP101 ALA102 MET103 GLY104 ILE105 ALA106 TRP107 LYS108 LYS109 PRO110 LEU111 ALA112 THR113 THR114 LYS115 GLU116 ALA117 ILE118 GLN119 ALA120 ILE121 ARG122 ASP123 PHE124 ILE125 SER126 GLY127 LYS128 LYS129 VAL130 SER131 MET132 ASP133 GLY134 GLU135 MET136 ILE137 LYS138 PHE139 ALA140 GLY141 ALA142 LYS143 LEU144 ALA145 PHE146 LYS147 ALA148 GLY149 ASN150 ILE151 PRO152 ILE153 TYR154 MET155 GLY156 ALA157 GLN158 GLY159 PRO160 LYS161 MET162 LEU163 GLU164 LEU165 ALA166 GLY167 GLU168 ILE169 ALA170 ASP171 GLY172 VAL173 LEU174 ILE175 ASN176 ALA177 SER178 HIS179 PRO180 LYS181 ASP182 PHE183 GLU184 VAL185 ALA186 VAL187 GLU188 GLN189 ILE190 LYS191 LYS192 GLY193 ALA194 GLU195 LYS196 ALA197 GLY198 ARG199 ASP200 PRO201 SER202 GLU203 VAL204 ASP205 VAL206 THR207 ALA208 TYR209 ALA210 CYS211 PHE212 SER213 ILE214 ASP215 LYS216 ASP217 PRO218 VAL219 LYS220 ALA221 VAL222 ASN223 ALA224 ALA225 LYS226 VAL227 VAL228 VAL229 ALA230 PHE231 ILE232 VAL233 ALA234 GLY235 SER236 PRO237 ASP238 LEU239 VAL240 LEU241 GLU242 ARG243 HIS244 GLY245 ILE246 PRO247 VAL248 GLU249 ALA250 LYS251 SER252 GLN253 ILE254 GLY255 ALA256 ALA257 ILE258 ALA259 LYS260 GLY261 ASP262 PHE263 GLY264 ALA265 LEU266 MET267 GLY268 GLY269 LEU270 VAL271 THR272 PRO273 GLN274 MET275 ILE276 GLU277 ALA278 PHE279 SER280 ILE281 CYS282 GLY283 THR284 PRO285 ASP286 ASP287 CYS288 MET289 LYS290 ARG291 ILE292 LYS293 ASP294 LEU295 GLU296 ALA297 ILE298 GLY299 VAL300 THR301 GLN302 ILE303 VAL304 ALA305 GLY306 SER307 PRO308 ILE309 GLY310 PRO311 ALA312 LYS313 GLU314 LYS315 ALA316 ILE317 LYS318 LEU319 ILE320 GLY321 LYS322 GLU323 ILE324 ILE325 ALA326 LYS327
Unit 2 MET1 LYS2 PHE3 GLY4 ILE5 GLU6 PHE7 VAL8 PRO9 SER10 ASP11 PRO12 ALA13 LEU14 LYS15 ILE16 ALA17 TYR18 TYR19 ALA20 LYS21 LEU22 SER23 GLU24 GLN25 GLN26 GLY27 PHE28 ASP29 HIS30 VAL31 TRP32 ILE33 THR34 ASP35 HIS36 TYR37 ASN38 ASN39 ARG40 ASP41 VAL42 TYR43 SER44 THR45 LEU46 THR47 VAL48 LEU49 ALA50 LEU51 ASN52 THR53 ASN54 SER55 ILE56 LYS57 ILE58 GLY59 PRO60 GLY61 VAL62 THR63 ASN64 SER65 TYR66 THR67 ARG68 ASN69 PRO70 ALA71 ILE72 THR73 ALA74 SER75 SER76 ILE77 ALA78 SER79 ILE80 ALA81 GLU82 ILE83 SER84 GLY85 GLY86 ARG87 ALA88 VAL89 LEU90 GLY91 LEU92 GLY93 PRO94 GLY95 ASP96 LYS97 ALA98 THR99 PHE100 ASP101 ALA102 MET103 GLY104 ILE105 ALA106 TRP107 LYS108 LYS109 PRO110 LEU111 ALA112 THR113 THR114 LYS115 GLU116 ALA117 ILE118 GLN119 ALA120 ILE121 ARG122 ASP123 PHE124 ILE125 SER126 GLY127 LYS128 LYS129 VAL130 SER131 MET132 ASP133 GLY134 GLU135 MET136 ILE137 LYS138 PHE139 ALA140 GLY141 ALA142 LYS143 LEU144 ALA145 PHE146 LYS147 ALA148 GLY149 ASN150 ILE151 PRO152 ILE153 TYR154 MET155 GLY156 ALA157 GLN158 GLY159 PRO160 LYS161 MET162 LEU163 GLU164 LEU165 ALA166 GLY167 GLU168 ILE169 ALA170 ASP171 GLY172 VAL173 LEU174 ILE175 ASN176 ALA177 SER178 HIS179 PRO180 LYS181 ASP182 PHE183 GLU184 VAL185 ALA186 VAL187 GLU188 GLN189 ILE190 LYS191 LYS192 GLY193 ALA194 GLU195 LYS196 ALA197 GLY198 ARG199 ASP200 PRO201 SER202 GLU203 VAL204 ASP205 VAL206 THR207 ALA208 TYR209 ALA210 CYS211 PHE212 SER213 ILE214 ASP215 LYS216 ASP217 PRO218 VAL219 LYS220 ALA221 VAL222 ASN223 ALA224 ALA225 LYS226 VAL227 VAL228 VAL229 ALA230 PHE231 ILE232 VAL233 ALA234 GLY235 SER236 PRO237 ASP238 LEU239 VAL240 LEU241 GLU242 ARG243 HIS244 GLY245 ILE246 PRO247 VAL248 GLU249 ALA250 LYS251 SER252 GLN253 ILE254 GLY255 ALA256 ALA257 ILE258 ALA259 LYS260 GLY261 ASP262 PHE263 GLY264 ALA265 LEU266 MET267 GLY268 GLY269 LEU270 VAL271 THR272 PRO273 GLN274 MET275 ILE276 GLU277 ALA278 PHE279 SER280 ILE281 CYS282 GLY283 THR284 PRO285 ASP286 ASP287 CYS288 MET289 LYS290 ARG291 ILE292 LYS293 ASP294 LEU295 GLU296 ALA297 ILE298 GLY299 VAL300 THR301 GLN302 ILE303 VAL304 ALA305 GLY306 SER307 PRO308 ILE309 GLY310 PRO311 ALA312 LYS313 GLU314 LYS315 ALA316 ILE317 LYS318 LEU319 ILE320 GLY321 LYS322 GLU323 ILE324 ILE325 ALA326 LYS327
Unit 3 MET1 LYS2 PHE3 GLY4 ILE5 GLU6 PHE7 VAL8 PRO9 SER10 ASP11 PRO12 ALA13 LEU14 LYS15 ILE16 ALA17 TYR18 TYR19 ALA20 LYS21 LEU22 SER23 GLU24 GLN25 GLN26 GLY27 PHE28 ASP29 HIS30 VAL31 TRP32 ILE33 THR34 ASP35 HIS36 TYR37 ASN38 ASN39 ARG40 ASP41 VAL42 TYR43 SER44 THR45 LEU46 THR47 VAL48 LEU49 ALA50 LEU51 ASN52 THR53 ASN54 SER55 ILE56 LYS57 ILE58 GLY59 PRO60 GLY61 VAL62 THR63 ASN64 SER65 TYR66 THR67 ARG68 ASN69 PRO70 ALA71 ILE72 THR73 ALA74 SER75 SER76 ILE77 ALA78 SER79 ILE80 ALA81 GLU82 ILE83 SER84 GLY85 GLY86 ARG87 ALA88 VAL89 LEU90 GLY91 LEU92 GLY93 PRO94 GLY95 ASP96 LYS97 ALA98 THR99 PHE100 ASP101 ALA102 MET103 GLY104 ILE105 ALA106 TRP107 LYS108 LYS109 PRO110 LEU111 ALA112 THR113 THR114 LYS115 GLU116 ALA117 ILE118 GLN119 ALA120 ILE121 ARG122 ASP123 PHE124 ILE125 SER126 GLY127 LYS128 LYS129 VAL130 SER131 MET132 ASP133 GLY134 GLU135 MET136 ILE137 LYS138 PHE139 ALA140 GLY141 ALA142 LYS143 LEU144 ALA145 PHE146 LYS147 ALA148 GLY149 ASN150 ILE151 PRO152 ILE153 TYR154 MET155 GLY156 ALA157 GLN158 GLY159 PRO160 LYS161 MET162 LEU163 GLU164 LEU165 ALA166 GLY167 GLU168 ILE169 ALA170 ASP171 GLY172 VAL173 LEU174 ILE175 ASN176 ALA177 SER178 HIS179 PRO180 LYS181 ASP182 PHE183 GLU184 VAL185 ALA186 VAL187 GLU188 GLN189 ILE190 LYS191 LYS192 GLY193 ALA194 GLU195 LYS196 ALA197 GLY198 ARG199 ASP200 PRO201 SER202 GLU203 VAL204 ASP205 VAL206 THR207 ALA208 TYR209 ALA210 CYS211 PHE212 SER213 ILE214 ASP215 LYS216 ASP217 PRO218 VAL219 LYS220 ALA221 VAL222 ASN223 ALA224 ALA225 LYS226 VAL227 VAL228 VAL229 ALA230 PHE231 ILE232 VAL233 ALA234 GLY235 SER236 PRO237 ASP238 LEU239 VAL240 LEU241 GLU242 ARG243 HIS244 GLY245 ILE246 PRO247 VAL248 GLU249 ALA250 LYS251 SER252 GLN253 ILE254 GLY255 ALA256 ALA257 ILE258 ALA259 LYS260 GLY261 ASP262 PHE263 GLY264 ALA265 LEU266 MET267 GLY268 GLY269 LEU270 VAL271 THR272 PRO273 GLN274 MET275 ILE276 GLU277 ALA278 PHE279 SER280 ILE281 CYS282 GLY283 THR284 PRO285 ASP286 ASP287 CYS288 MET289 LYS290 ARG291 ILE292 LYS293 ASP294 LEU295 GLU296 ALA297 ILE298 GLY299 VAL300 THR301 GLN302 ILE303 VAL304 ALA305 GLY306 SER307 PRO308 ILE309 GLY310 PRO311 ALA312 LYS313 GLU314 LYS315 ALA316 ILE317 LYS318 LEU319 ILE320 GLY321 LYS322 GLU323 ILE324 ILE325 ALA326 LYS327
Unit 4 MET1 LYS2 PHE3 GLY4 ILE5 GLU6 PHE7 VAL8 PRO9 SER10 ASP11 PRO12 ALA13 LEU14 LYS15 ILE16 ALA17 TYR18 TYR19 ALA20 LYS21 LEU22 SER23 GLU24 GLN25 GLN26 GLY27 PHE28 ASP29 HIS30 VAL31 TRP32 ILE33 THR34 ASP35 HIS36 TYR37 ASN38 ASN39 ARG40 ASP41 VAL42 TYR43 SER44 THR45 LEU46 THR47 VAL48 LEU49 ALA50 LEU51 ASN52 THR53 ASN54 SER55 ILE56 LYS57 ILE58 GLY59 PRO60 GLY61 VAL62 THR63 ASN64 SER65 TYR66 THR67 ARG68 ASN69 PRO70 ALA71 ILE72 THR73 ALA74 SER75 SER76 ILE77 ALA78 SER79 ILE80 ALA81 GLU82 ILE83 SER84 GLY85 GLY86 ARG87 ALA88 VAL89 LEU90 GLY91 LEU92 GLY93 PRO94 GLY95 ASP96 LYS97 ALA98 THR99 PHE100 ASP101 ALA102 MET103 GLY104 ILE105 ALA106 TRP107 LYS108 LYS109 PRO110 LEU111 ALA112 THR113 THR114 LYS115 GLU116 ALA117 ILE118 GLN119 ALA120 ILE121 ARG122 ASP123 PHE124 ILE125 SER126 GLY127 LYS128 LYS129 VAL130 SER131 MET132 ASP133 GLY134 GLU135 MET136 ILE137 LYS138 PHE139 ALA140 GLY141 ALA142 LYS143 LEU144 ALA145 PHE146 LYS147 ALA148 GLY149 ASN150 ILE151 PRO152 ILE153 TYR154 MET155 GLY156 ALA157 GLN158 GLY159 PRO160 LYS161 MET162 LEU163 GLU164 LEU165 ALA166 GLY167 GLU168 ILE169 ALA170 ASP171 GLY172 VAL173 LEU174 ILE175 ASN176 ALA177 SER178 HIS179 PRO180 LYS181 ASP182 PHE183 GLU184 VAL185 ALA186 VAL187 GLU188 GLN189 ILE190 LYS191 LYS192 GLY193 ALA194 GLU195 LYS196 ALA197 GLY198 ARG199 ASP200 PRO201 SER202 GLU203 VAL204 ASP205 VAL206 THR207 ALA208 TYR209 ALA210 CYS211 PHE212 SER213 ILE214 ASP215 LYS216 ASP217 PRO218 VAL219 LYS220 ALA221 VAL222 ASN223 ALA224 ALA225 LYS226 VAL227 VAL228 VAL229 ALA230 PHE231 ILE232 VAL233 ALA234 GLY235 SER236 PRO237 ASP238 LEU239 VAL240 LEU241 GLU242 ARG243 HIS244 GLY245 ILE246 PRO247 VAL248 GLU249 ALA250 LYS251 SER252 GLN253 ILE254 GLY255 ALA256 ALA257 ILE258 ALA259 LYS260 GLY261 ASP262 PHE263 GLY264 ALA265 LEU266 MET267 GLY268 GLY269 LEU270 VAL271 THR272 PRO273 GLN274 MET275 ILE276 GLU277 ALA278 PHE279 SER280 ILE281 CYS282 GLY283 THR284 PRO285 ASP286 ASP287 CYS288 MET289 LYS290 ARG291 ILE292 LYS293 ASP294 LEU295 GLU296 ALA297 ILE298 GLY299 VAL300 THR301 GLN302 ILE303 VAL304 ALA305 GLY306 SER307 PRO308 ILE309 GLY310 PRO311 ALA312 LYS313 GLU314 LYS315 ALA316 ILE317 LYS318 LEU319 ILE320 GLY321 LYS322 GLU323 ILE324 ILE325 ALA326 LYS327
Ligands
Unit 5 F42328
Unit 6 F421328 CL4001
Unit 7 F422328
Unit 8 F423328 CL4002 1PG4003
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany