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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF THE HIV-1 FRAMESHIFT INDUCING ELEMENT
Keywords STEM-LOOP, PURINE BULGE, TETRALOOP, RNA
Experiment NMR
Number of Models  20


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Z2J     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 45 1451 0
total       45 1451 0

Nucleic acids
Unit 1 G1 G2 G3 A4 A5 G6 A7 U8 C9 U10 G11 G12 C13 C14 U15 U16 C17 C18 C19 A20 C21 A22 A23 G24 G25 G26 A27 A28 G29 G30 C31 C32 A33 G34 G35 G36 A37 A38 U39 C40 U41 U42 C43 C44 C45

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany