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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AGROBACTERIUM TUMEFACIENS MALATE DEHYDR NEW YORK STRUCTURAL GENOMICS CONSORTIUM
Keywords MALATE DEHYDROGENASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRU INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GEN NYSGXRC, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Z2I     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALATE DEHYDROGENASE  A 350 2631 0
2  Protein   MALATE DEHYDROGENASE  B 350 2631 0
3  Protein   MALATE DEHYDROGENASE  C 350 2631 0
4  Protein   MALATE DEHYDROGENASE  D 350 2631 0
5  Ligand   MALATE DEHYDROGENASE  A 1 0 44
6  Ligand   MALATE DEHYDROGENASE  B 1 0 44
7  Ligand   MALATE DEHYDROGENASE  C 1 0 44
8  Ligand   MALATE DEHYDROGENASE  D 1 0 44
9 Water     699 0 699
total       2103 10524 875

Proteins
Unit 1 THR9 VAL10 LEU11 ALA12 ARG13 LEU14 ASP15 GLU16 LEU17 GLU18 ARG19 PHE20 CYS21 ARG22 ALA23 VAL24 PHE25 LEU26 ALA27 VAL28 GLY29 THR30 ASP31 GLU32 GLU33 THR34 ALA35 ASP36 ALA37 ALA38 THR39 ARG40 ALA41 MET42 MET43 HIS44 GLY45 THR46 ARG47 LEU48 GLY49 VAL50 ASP51 SER52 HIS53 GLY54 VAL55 ARG56 LEU57 LEU58 ALA59 HIS60 TYR61 VAL62 THR63 ALA64 LEU65 GLU66 GLY67 GLY68 ARG69 LEU70 ASN71 ARG72 ARG73 PRO74 GLN75 ILE76 SER77 ARG78 VAL79 SER80 GLY81 PHE82 GLY83 ALA84 VAL85 GLU86 THR87 ILE88 ASP89 ALA90 ASP91 HIS92 ALA93 HIS94 GLY95 ALA96 ARG97 ALA98 THR99 TYR100 ALA101 ALA102 MET103 GLU104 ASN105 ALA106 MET107 ALA108 LEU109 ALA110 GLU111 LYS112 PHE113 GLY114 ILE115 GLY116 ALA117 VAL118 ALA119 ILE120 ARG121 ASN122 SER123 SER124 HIS125 PHE126 GLY127 PRO128 ALA129 GLY130 ALA131 TYR132 ALA133 LEU134 GLU135 ALA136 ALA137 ARG138 GLN139 GLY140 TYR141 ILE142 GLY143 LEU144 ALA145 PHE146 CYS147 ASN148 SER149 ASP150 SER151 PHE152 VAL153 ARG154 LEU155 HIS156 ASP157 GLY158 ALA159 MET160 ARG161 PHE162 HIS163 GLY164 THR165 ASN166 PRO167 ILE168 ALA169 VAL170 GLY171 VAL172 PRO173 ALA174 ALA175 ASP176 ASP177 MET178 PRO179 TRP180 LEU181 LEU182 ASP183 MET184 ALA185 THR186 SER187 ALA188 VAL189 PRO190 TYR191 ASN192 ARG193 VAL194 LEU195 LEU196 TYR197 ARG198 SER199 LEU200 GLY201 GLN202 GLN203 LEU204 PRO205 GLN206 GLY207 VAL208 ALA209 SER210 ASP211 GLY212 ASP213 GLY214 VAL215 ASP216 THR217 ARG218 ASP219 PRO220 ASN221 ALA222 VAL223 GLU224 MET225 LEU226 ALA227 PRO228 VAL229 GLY230 GLY231 GLU232 PHE233 GLY234 PHE235 LYS236 GLY237 ALA238 ALA239 LEU240 ALA241 GLY242 VAL243 VAL244 GLU245 ILE246 PHE247 SER248 ALA249 VAL250 LEU251 THR252 GLY253 MET254 ARG255 LEU256 SER257 PHE258 ASP259 LEU260 ALA261 PRO262 MET263 GLY264 GLY265 PRO266 ASP267 PHE268 SER269 THR270 PRO271 ARG272 GLY273 LEU274 GLY275 ALA276 PHE277 VAL278 LEU279 ALA280 LEU281 LYS282 PRO283 GLU284 ALA285 PHE286 LEU287 GLU288 ARG289 ASP290 VAL291 PHE292 ASP293 GLU294 SER295 MET296 LYS297 ARG298 TYR299 LEU300 GLU301 VAL302 LEU303 ARG304 GLY305 SER306 PRO307 ALA308 ARG309 GLU310 ASP311 CYS312 LYS313 VAL314 MET315 ALA316 PRO317 GLY318 ASP319 ARG320 GLU321 TRP322 ALA323 VAL324 ALA325 ALA326 LYS327 ARG328 GLU329 ARG330 GLU331 GLY332 ALA333 PRO334 VAL335 ASP336 PRO337 VAL338 THR339 ARG340 ALA341 ALA342 PHE343 SER344 GLU345 LEU346 ALA347 GLU348 LYS349 PHE350 SER351 VAL352 SER353 PRO354 PRO355 THR356 TYR357 HIS358
Unit 2 THR9 VAL10 LEU11 ALA12 ARG13 LEU14 ASP15 GLU16 LEU17 GLU18 ARG19 PHE20 CYS21 ARG22 ALA23 VAL24 PHE25 LEU26 ALA27 VAL28 GLY29 THR30 ASP31 GLU32 GLU33 THR34 ALA35 ASP36 ALA37 ALA38 THR39 ARG40 ALA41 MET42 MET43 HIS44 GLY45 THR46 ARG47 LEU48 GLY49 VAL50 ASP51 SER52 HIS53 GLY54 VAL55 ARG56 LEU57 LEU58 ALA59 HIS60 TYR61 VAL62 THR63 ALA64 LEU65 GLU66 GLY67 GLY68 ARG69 LEU70 ASN71 ARG72 ARG73 PRO74 GLN75 ILE76 SER77 ARG78 VAL79 SER80 GLY81 PHE82 GLY83 ALA84 VAL85 GLU86 THR87 ILE88 ASP89 ALA90 ASP91 HIS92 ALA93 HIS94 GLY95 ALA96 ARG97 ALA98 THR99 TYR100 ALA101 ALA102 MET103 GLU104 ASN105 ALA106 MET107 ALA108 LEU109 ALA110 GLU111 LYS112 PHE113 GLY114 ILE115 GLY116 ALA117 VAL118 ALA119 ILE120 ARG121 ASN122 SER123 SER124 HIS125 PHE126 GLY127 PRO128 ALA129 GLY130 ALA131 TYR132 ALA133 LEU134 GLU135 ALA136 ALA137 ARG138 GLN139 GLY140 TYR141 ILE142 GLY143 LEU144 ALA145 PHE146 CYS147 ASN148 SER149 ASP150 SER151 PHE152 VAL153 ARG154 LEU155 HIS156 ASP157 GLY158 ALA159 MET160 ARG161 PHE162 HIS163 GLY164 THR165 ASN166 PRO167 ILE168 ALA169 VAL170 GLY171 VAL172 PRO173 ALA174 ALA175 ASP176 ASP177 MET178 PRO179 TRP180 LEU181 LEU182 ASP183 MET184 ALA185 THR186 SER187 ALA188 VAL189 PRO190 TYR191 ASN192 ARG193 VAL194 LEU195 LEU196 TYR197 ARG198 SER199 LEU200 GLY201 GLN202 GLN203 LEU204 PRO205 GLN206 GLY207 VAL208 ALA209 SER210 ASP211 GLY212 ASP213 GLY214 VAL215 ASP216 THR217 ARG218 ASP219 PRO220 ASN221 ALA222 VAL223 GLU224 MET225 LEU226 ALA227 PRO228 VAL229 GLY230 GLY231 GLU232 PHE233 GLY234 PHE235 LYS236 GLY237 ALA238 ALA239 LEU240 ALA241 GLY242 VAL243 VAL244 GLU245 ILE246 PHE247 SER248 ALA249 VAL250 LEU251 THR252 GLY253 MET254 ARG255 LEU256 SER257 PHE258 ASP259 LEU260 ALA261 PRO262 MET263 GLY264 GLY265 PRO266 ASP267 PHE268 SER269 THR270 PRO271 ARG272 GLY273 LEU274 GLY275 ALA276 PHE277 VAL278 LEU279 ALA280 LEU281 LYS282 PRO283 GLU284 ALA285 PHE286 LEU287 GLU288 ARG289 ASP290 VAL291 PHE292 ASP293 GLU294 SER295 MET296 LYS297 ARG298 TYR299 LEU300 GLU301 VAL302 LEU303 ARG304 GLY305 SER306 PRO307 ALA308 ARG309 GLU310 ASP311 CYS312 LYS313 VAL314 MET315 ALA316 PRO317 GLY318 ASP319 ARG320 GLU321 TRP322 ALA323 VAL324 ALA325 ALA326 LYS327 ARG328 GLU329 ARG330 GLU331 GLY332 ALA333 PRO334 VAL335 ASP336 PRO337 VAL338 THR339 ARG340 ALA341 ALA342 PHE343 SER344 GLU345 LEU346 ALA347 GLU348 LYS349 PHE350 SER351 VAL352 SER353 PRO354 PRO355 THR356 TYR357 HIS358
Unit 3 THR9 VAL10 LEU11 ALA12 ARG13 LEU14 ASP15 GLU16 LEU17 GLU18 ARG19 PHE20 CYS21 ARG22 ALA23 VAL24 PHE25 LEU26 ALA27 VAL28 GLY29 THR30 ASP31 GLU32 GLU33 THR34 ALA35 ASP36 ALA37 ALA38 THR39 ARG40 ALA41 MET42 MET43 HIS44 GLY45 THR46 ARG47 LEU48 GLY49 VAL50 ASP51 SER52 HIS53 GLY54 VAL55 ARG56 LEU57 LEU58 ALA59 HIS60 TYR61 VAL62 THR63 ALA64 LEU65 GLU66 GLY67 GLY68 ARG69 LEU70 ASN71 ARG72 ARG73 PRO74 GLN75 ILE76 SER77 ARG78 VAL79 SER80 GLY81 PHE82 GLY83 ALA84 VAL85 GLU86 THR87 ILE88 ASP89 ALA90 ASP91 HIS92 ALA93 HIS94 GLY95 ALA96 ARG97 ALA98 THR99 TYR100 ALA101 ALA102 MET103 GLU104 ASN105 ALA106 MET107 ALA108 LEU109 ALA110 GLU111 LYS112 PHE113 GLY114 ILE115 GLY116 ALA117 VAL118 ALA119 ILE120 ARG121 ASN122 SER123 SER124 HIS125 PHE126 GLY127 PRO128 ALA129 GLY130 ALA131 TYR132 ALA133 LEU134 GLU135 ALA136 ALA137 ARG138 GLN139 GLY140 TYR141 ILE142 GLY143 LEU144 ALA145 PHE146 CYS147 ASN148 SER149 ASP150 SER151 PHE152 VAL153 ARG154 LEU155 HIS156 ASP157 GLY158 ALA159 MET160 ARG161 PHE162 HIS163 GLY164 THR165 ASN166 PRO167 ILE168 ALA169 VAL170 GLY171 VAL172 PRO173 ALA174 ALA175 ASP176 ASP177 MET178 PRO179 TRP180 LEU181 LEU182 ASP183 MET184 ALA185 THR186 SER187 ALA188 VAL189 PRO190 TYR191 ASN192 ARG193 VAL194 LEU195 LEU196 TYR197 ARG198 SER199 LEU200 GLY201 GLN202 GLN203 LEU204 PRO205 GLN206 GLY207 VAL208 ALA209 SER210 ASP211 GLY212 ASP213 GLY214 VAL215 ASP216 THR217 ARG218 ASP219 PRO220 ASN221 ALA222 VAL223 GLU224 MET225 LEU226 ALA227 PRO228 VAL229 GLY230 GLY231 GLU232 PHE233 GLY234 PHE235 LYS236 GLY237 ALA238 ALA239 LEU240 ALA241 GLY242 VAL243 VAL244 GLU245 ILE246 PHE247 SER248 ALA249 VAL250 LEU251 THR252 GLY253 MET254 ARG255 LEU256 SER257 PHE258 ASP259 LEU260 ALA261 PRO262 MET263 GLY264 GLY265 PRO266 ASP267 PHE268 SER269 THR270 PRO271 ARG272 GLY273 LEU274 GLY275 ALA276 PHE277 VAL278 LEU279 ALA280 LEU281 LYS282 PRO283 GLU284 ALA285 PHE286 LEU287 GLU288 ARG289 ASP290 VAL291 PHE292 ASP293 GLU294 SER295 MET296 LYS297 ARG298 TYR299 LEU300 GLU301 VAL302 LEU303 ARG304 GLY305 SER306 PRO307 ALA308 ARG309 GLU310 ASP311 CYS312 LYS313 VAL314 MET315 ALA316 PRO317 GLY318 ASP319 ARG320 GLU321 TRP322 ALA323 VAL324 ALA325 ALA326 LYS327 ARG328 GLU329 ARG330 GLU331 GLY332 ALA333 PRO334 VAL335 ASP336 PRO337 VAL338 THR339 ARG340 ALA341 ALA342 PHE343 SER344 GLU345 LEU346 ALA347 GLU348 LYS349 PHE350 SER351 VAL352 SER353 PRO354 PRO355 THR356 TYR357 HIS358
Unit 4 THR9 VAL10 LEU11 ALA12 ARG13 LEU14 ASP15 GLU16 LEU17 GLU18 ARG19 PHE20 CYS21 ARG22 ALA23 VAL24 PHE25 LEU26 ALA27 VAL28 GLY29 THR30 ASP31 GLU32 GLU33 THR34 ALA35 ASP36 ALA37 ALA38 THR39 ARG40 ALA41 MET42 MET43 HIS44 GLY45 THR46 ARG47 LEU48 GLY49 VAL50 ASP51 SER52 HIS53 GLY54 VAL55 ARG56 LEU57 LEU58 ALA59 HIS60 TYR61 VAL62 THR63 ALA64 LEU65 GLU66 GLY67 GLY68 ARG69 LEU70 ASN71 ARG72 ARG73 PRO74 GLN75 ILE76 SER77 ARG78 VAL79 SER80 GLY81 PHE82 GLY83 ALA84 VAL85 GLU86 THR87 ILE88 ASP89 ALA90 ASP91 HIS92 ALA93 HIS94 GLY95 ALA96 ARG97 ALA98 THR99 TYR100 ALA101 ALA102 MET103 GLU104 ASN105 ALA106 MET107 ALA108 LEU109 ALA110 GLU111 LYS112 PHE113 GLY114 ILE115 GLY116 ALA117 VAL118 ALA119 ILE120 ARG121 ASN122 SER123 SER124 HIS125 PHE126 GLY127 PRO128 ALA129 GLY130 ALA131 TYR132 ALA133 LEU134 GLU135 ALA136 ALA137 ARG138 GLN139 GLY140 TYR141 ILE142 GLY143 LEU144 ALA145 PHE146 CYS147 ASN148 SER149 ASP150 SER151 PHE152 VAL153 ARG154 LEU155 HIS156 ASP157 GLY158 ALA159 MET160 ARG161 PHE162 HIS163 GLY164 THR165 ASN166 PRO167 ILE168 ALA169 VAL170 GLY171 VAL172 PRO173 ALA174 ALA175 ASP176 ASP177 MET178 PRO179 TRP180 LEU181 LEU182 ASP183 MET184 ALA185 THR186 SER187 ALA188 VAL189 PRO190 TYR191 ASN192 ARG193 VAL194 LEU195 LEU196 TYR197 ARG198 SER199 LEU200 GLY201 GLN202 GLN203 LEU204 PRO205 GLN206 GLY207 VAL208 ALA209 SER210 ASP211 GLY212 ASP213 GLY214 VAL215 ASP216 THR217 ARG218 ASP219 PRO220 ASN221 ALA222 VAL223 GLU224 MET225 LEU226 ALA227 PRO228 VAL229 GLY230 GLY231 GLU232 PHE233 GLY234 PHE235 LYS236 GLY237 ALA238 ALA239 LEU240 ALA241 GLY242 VAL243 VAL244 GLU245 ILE246 PHE247 SER248 ALA249 VAL250 LEU251 THR252 GLY253 MET254 ARG255 LEU256 SER257 PHE258 ASP259 LEU260 ALA261 PRO262 MET263 GLY264 GLY265 PRO266 ASP267 PHE268 SER269 THR270 PRO271 ARG272 GLY273 LEU274 GLY275 ALA276 PHE277 VAL278 LEU279 ALA280 LEU281 LYS282 PRO283 GLU284 ALA285 PHE286 LEU287 GLU288 ARG289 ASP290 VAL291 PHE292 ASP293 GLU294 SER295 MET296 LYS297 ARG298 TYR299 LEU300 GLU301 VAL302 LEU303 ARG304 GLY305 SER306 PRO307 ALA308 ARG309 GLU310 ASP311 CYS312 LYS313 VAL314 MET315 ALA316 PRO317 GLY318 ASP319 ARG320 GLU321 TRP322 ALA323 VAL324 ALA325 ALA326 LYS327 ARG328 GLU329 ARG330 GLU331 GLY332 ALA333 PRO334 VAL335 ASP336 PRO337 VAL338 THR339 ARG340 ALA341 ALA342 PHE343 SER344 GLU345 LEU346 ALA347 GLU348 LYS349 PHE350 SER351 VAL352 SER353 PRO354 PRO355 THR356 TYR357 HIS358

Ligands
Unit 5 NAD700
Unit 6 NAD701
Unit 7 NAD702
Unit 8 NAD703

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany