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Sequence, Chains, Asymmetric and Biological Units

Title HIV-1 DIS RNA SUBTYPE F- ZN SOAKED
Keywords HIV-1, RNA, KISSING-LOOP, METAL IONS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1YXP     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 23 469 21
2  RNA    B 23 469 21
3  Ligand   5'-R(*CP*UP*(5BU) P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP* G)-3'  A 1 0 1
4  Ligand   5'-R(*CP*UP*(5BU) P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP* G)-3'  B 1 0 1
total       48 938 44
Nucleic acids
Unit 1 C1 U2 5BU3 G4 C5 U6 G7 A8 A9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23
Unit 2 C1 U2 5BU3 G4 C5 U6 G7 A8 A9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23
Ligands
Unit 3 ZN100
Unit 4 ZN101
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany