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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 4-DEOXY-1-THREO-5-HEXOSULOSE-URONATE KE ISOMERASE FROM ENTEROCOCCUS FAECALIS
Keywords STRUCTURAL GENOMICS, NYSGXRC TARGET T1814, KETOL-ISOMERASE, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER STRUCTURAL GENOMICS, ISOMERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1YWK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 255 2053 0
2  Protein    B 254 2042 0
3  Protein    C 253 2036 0
4  Protein    D 254 2045 0
5  Protein    E 254 2042 0
6  Protein    F 253 2034 0
total       1523 12252 0
Proteins
Unit 1 LEU998 GLN999 ASN1000 MET1001 GLU1002 THR1003 ARG1004 TYR1005 THR1006 HIS1007 SER1008 PRO1009 ALA1010 ASP1011 ILE1012 ARG1013 HIS1014 TYR1015 SER1016 THR1017 GLU1018 GLN1019 LEU1020 ARG1021 ASP1022 GLU1023 PHE1024 LEU1025 VAL1026 GLU1027 LYS1028 VAL1029 PHE1030 ILE1031 PRO1032 GLY1033 ALA1034 ILE1035 SER1036 LEU1037 THR1038 TYR1039 THR1040 HIS1041 ASN1042 ASP1043 ARG1044 MET1045 ILE1046 PHE1047 GLY1048 GLY1049 VAL1050 THR1051 PRO1052 THR1053 THR1054 GLU1055 GLU1056 LEU1057 GLU1058 ILE1059 ILE1060 LEU1061 ASP1062 LYS1063 GLU1064 LEU1065 GLY1066 VAL1067 ASP1068 TYR1069 PHE1070 LEU1071 GLU1072 ARG1073 ARG1074 GLU1075 LEU1076 GLY1077 VAL1078 ILE1079 ASN1080 ILE1081 GLY1082 GLY1083 PRO1084 GLY1085 PHE1086 ILE1087 GLU1088 ILE1089 ASP1090 GLY1091 ALA1092 LYS1093 GLU1094 THR1095 MET1096 LYS1097 LYS1098 GLN1099 ASP1100 GLY1101 TYR1102 TYR1103 ILE1104 GLY1105 LYS1106 GLU1107 THR1108 LYS1109 HIS1110 VAL1111 ARG1112 PHE1113 SER1114 SER1115 GLU1116 ASN1117 PRO1118 ASP1119 ASN1120 PRO1121 ALA1122 LYS1123 PHE1124 TYR1125 ILE1126 SER1127 CYS1128 VAL1129 PRO1130 ALA1131 HIS1132 HIS1133 LYS1134 TYR1135 PRO1136 ASN1137 VAL1138 LYS1139 ILE1140 SER1141 ILE1142 ASP1143 GLU1144 ILE1145 THR1146 PRO1147 MET1148 GLU1149 THR1150 GLY1151 ASP1152 PRO1153 LEU1154 THR1155 LEU1156 ASN1157 GLN1158 ARG1159 LYS1160 ILE1161 TYR1162 GLN1163 TYR1164 ILE1165 HIS1166 PRO1167 ASN1168 VAL1169 CYS1170 GLU1171 SER1172 CYS1173 GLN1174 LEU1175 GLN1176 MET1177 GLY1178 TYR1179 THR1180 ILE1181 LEU1182 GLU1183 PRO1184 GLY1185 SER1186 ALA1187 TRP1188 ASN1189 THR1190 ARG1199 MET1200 GLU1201 ALA1202 TYR1203 VAL1204 TYR1205 PHE1206 ASP1207 MET1208 GLU1209 GLU1210 ASP1211 THR1212 ARG1213 ILE1214 PHE1215 HIS1216 MET1217 MET1218 GLY1219 LYS1220 PRO1221 ASP1222 GLU1223 THR1224 LYS1225 HIS1226 LEU1227 VAL1228 MET1229 SER1230 ASN1231 GLU1232 GLN1233 ALA1234 ALA1235 ILE1236 SER1237 PRO1238 SER1239 TRP1240 SER1241 ILE1242 HIS1243 SER1244 GLY1245 VAL1246 GLY1247 THR1248 SER1249 ASN1250 TYR1251 SER1252 PHE1253 ILE1254 TRP1255 ALA1256 MET1257 CYS1258 GLY1259 GLU1260
Unit 2 LEU998 GLN999 ASN1000 MET1001 GLU1002 THR1003 ARG1004 TYR1005 THR1006 HIS1007 SER1008 PRO1009 ALA1010 ASP1011 ILE1012 ARG1013 HIS1014 TYR1015 SER1016 THR1017 GLU1018 GLN1019 LEU1020 ARG1021 ASP1022 GLU1023 PHE1024 LEU1025 VAL1026 GLU1027 LYS1028 VAL1029 PHE1030 ILE1031 PRO1032 GLY1033 ALA1034 ILE1035 SER1036 LEU1037 THR1038 TYR1039 THR1040 HIS1041 ASN1042 ASP1043 ARG1044 MET1045 ILE1046 PHE1047 GLY1048 GLY1049 VAL1050 THR1051 PRO1052 THR1053 THR1054 GLU1055 GLU1056 LEU1057 GLU1058 ILE1059 ILE1060 LEU1061 ASP1062 LYS1063 GLU1064 LEU1065 GLY1066 VAL1067 ASP1068 TYR1069 PHE1070 LEU1071 GLU1072 ARG1073 ARG1074 GLU1075 LEU1076 GLY1077 VAL1078 ILE1079 ASN1080 ILE1081 GLY1082 GLY1083 PRO1084 GLY1085 PHE1086 ILE1087 GLU1088 ILE1089 ASP1090 GLY1091 ALA1092 LYS1093 GLU1094 THR1095 MET1096 LYS1097 LYS1098 GLN1099 ASP1100 GLY1101 TYR1102 TYR1103 ILE1104 GLY1105 LYS1106 GLU1107 THR1108 LYS1109 HIS1110 VAL1111 ARG1112 PHE1113 SER1114 SER1115 GLU1116 ASN1117 PRO1118 ASP1119 ASN1120 PRO1121 ALA1122 LYS1123 PHE1124 TYR1125 ILE1126 SER1127 CYS1128 VAL1129 PRO1130 ALA1131 HIS1132 HIS1133 LYS1134 TYR1135 PRO1136 ASN1137 VAL1138 LYS1139 ILE1140 SER1141 ILE1142 ASP1143 GLU1144 ILE1145 THR1146 PRO1147 MET1148 GLU1149 THR1150 GLY1151 ASP1152 PRO1153 LEU1154 THR1155 LEU1156 ASN1157 GLN1158 ARG1159 LYS1160 ILE1161 TYR1162 GLN1163 TYR1164 ILE1165 HIS1166 PRO1167 ASN1168 VAL1169 CYS1170 GLU1171 SER1172 CYS1173 GLN1174 LEU1175 GLN1176 MET1177 GLY1178 TYR1179 THR1180 ILE1181 LEU1182 GLU1183 PRO1184 GLY1185 SER1186 ALA1187 TRP1188 ASN1189 THR1190 MET1200 GLU1201 ALA1202 TYR1203 VAL1204 TYR1205 PHE1206 ASP1207 MET1208 GLU1209 GLU1210 ASP1211 THR1212 ARG1213 ILE1214 PHE1215 HIS1216 MET1217 MET1218 GLY1219 LYS1220 PRO1221 ASP1222 GLU1223 THR1224 LYS1225 HIS1226 LEU1227 VAL1228 MET1229 SER1230 ASN1231 GLU1232 GLN1233 ALA1234 ALA1235 ILE1236 SER1237 PRO1238 SER1239 TRP1240 SER1241 ILE1242 HIS1243 SER1244 GLY1245 VAL1246 GLY1247 THR1248 SER1249 ASN1250 TYR1251 SER1252 PHE1253 ILE1254 TRP1255 ALA1256 MET1257 CYS1258 GLY1259 GLU1260
Unit 3 GLN999 ASN1000 MET1001 GLU1002 THR1003 ARG1004 TYR1005 THR1006 HIS1007 SER1008 PRO1009 ALA1010 ASP1011 ILE1012 ARG1013 HIS1014 TYR1015 SER1016 THR1017 GLU1018 GLN1019 LEU1020 ARG1021 ASP1022 GLU1023 PHE1024 LEU1025 VAL1026 GLU1027 LYS1028 VAL1029 PHE1030 ILE1031 PRO1032 GLY1033 ALA1034 ILE1035 SER1036 LEU1037 THR1038 TYR1039 THR1040 HIS1041 ASN1042 ASP1043 ARG1044 MET1045 ILE1046 PHE1047 GLY1048 GLY1049 VAL1050 THR1051 PRO1052 THR1053 THR1054 GLU1055 GLU1056 LEU1057 GLU1058 ILE1059 ILE1060 LEU1061 ASP1062 LYS1063 GLU1064 LEU1065 GLY1066 VAL1067 ASP1068 TYR1069 PHE1070 LEU1071 GLU1072 ARG1073 ARG1074 GLU1075 LEU1076 GLY1077 VAL1078 ILE1079 ASN1080 ILE1081 GLY1082 GLY1083 PRO1084 GLY1085 PHE1086 ILE1087 GLU1088 ILE1089 ASP1090 GLY1091 ALA1092 LYS1093 GLU1094 THR1095 MET1096 LYS1097 LYS1098 GLN1099 ASP1100 GLY1101 TYR1102 TYR1103 ILE1104 GLY1105 LYS1106 GLU1107 THR1108 LYS1109 HIS1110 VAL1111 ARG1112 PHE1113 SER1114 SER1115 GLU1116 ASN1117 PRO1118 ASP1119 ASN1120 PRO1121 ALA1122 LYS1123 PHE1124 TYR1125 ILE1126 SER1127 CYS1128 VAL1129 PRO1130 ALA1131 HIS1132 HIS1133 LYS1134 TYR1135 PRO1136 ASN1137 VAL1138 LYS1139 ILE1140 SER1141 ILE1142 ASP1143 GLU1144 ILE1145 THR1146 PRO1147 MET1148 GLU1149 THR1150 GLY1151 ASP1152 PRO1153 LEU1154 THR1155 LEU1156 ASN1157 GLN1158 ARG1159 LYS1160 ILE1161 TYR1162 GLN1163 TYR1164 ILE1165 HIS1166 PRO1167 ASN1168 VAL1169 CYS1170 GLU1171 SER1172 CYS1173 GLN1174 LEU1175 GLN1176 MET1177 GLY1178 TYR1179 THR1180 ILE1181 LEU1182 GLU1183 PRO1184 GLY1185 SER1186 ALA1187 TRP1188 ASN1189 THR1190 ARG1199 MET1200 GLU1201 ALA1202 TYR1203 VAL1204 TYR1205 PHE1206 ASP1207 MET1208 GLU1209 GLU1210 ASP1211 THR1212 ARG1213 ILE1214 PHE1215 HIS1216 MET1217 MET1218 GLY1219 LYS1220 PRO1221 ASP1222 GLU1223 THR1224 LYS1225 HIS1226 LEU1227 VAL1228 MET1229 SER1230 ASN1231 GLU1232 GLN1233 ALA1234 ALA1235 ILE1236 SER1237 PRO1238 SER1239 TRP1240 SER1241 ILE1242 HIS1243 SER1244 GLY1245 VAL1246 GLY1247 THR1248 SER1249 ASN1250 TYR1251 SER1252 PHE1253 ILE1254 TRP1255 ALA1256 MET1257 CYS1258 GLY1259
Unit 4 GLN999 ASN1000 MET1001 GLU1002 THR1003 ARG1004 TYR1005 THR1006 HIS1007 SER1008 PRO1009 ALA1010 ASP1011 ILE1012 ARG1013 HIS1014 TYR1015 SER1016 THR1017 GLU1018 GLN1019 LEU1020 ARG1021 ASP1022 GLU1023 PHE1024 LEU1025 VAL1026 GLU1027 LYS1028 VAL1029 PHE1030 ILE1031 PRO1032 GLY1033 ALA1034 ILE1035 SER1036 LEU1037 THR1038 TYR1039 THR1040 HIS1041 ASN1042 ASP1043 ARG1044 MET1045 ILE1046 PHE1047 GLY1048 GLY1049 VAL1050 THR1051 PRO1052 THR1053 THR1054 GLU1055 GLU1056 LEU1057 GLU1058 ILE1059 ILE1060 LEU1061 ASP1062 LYS1063 GLU1064 LEU1065 GLY1066 VAL1067 ASP1068 TYR1069 PHE1070 LEU1071 GLU1072 ARG1073 ARG1074 GLU1075 LEU1076 GLY1077 VAL1078 ILE1079 ASN1080 ILE1081 GLY1082 GLY1083 PRO1084 GLY1085 PHE1086 ILE1087 GLU1088 ILE1089 ASP1090 GLY1091 ALA1092 LYS1093 GLU1094 THR1095 MET1096 LYS1097 LYS1098 GLN1099 ASP1100 GLY1101 TYR1102 TYR1103 ILE1104 GLY1105 LYS1106 GLU1107 THR1108 LYS1109 HIS1110 VAL1111 ARG1112 PHE1113 SER1114 SER1115 GLU1116 ASN1117 PRO1118 ASP1119 ASN1120 PRO1121 ALA1122 LYS1123 PHE1124 TYR1125 ILE1126 SER1127 CYS1128 VAL1129 PRO1130 ALA1131 HIS1132 HIS1133 LYS1134 TYR1135 PRO1136 ASN1137 VAL1138 LYS1139 ILE1140 SER1141 ILE1142 ASP1143 GLU1144 ILE1145 THR1146 PRO1147 MET1148 GLU1149 THR1150 GLY1151 ASP1152 PRO1153 LEU1154 THR1155 LEU1156 ASN1157 GLN1158 ARG1159 LYS1160 ILE1161 TYR1162 GLN1163 TYR1164 ILE1165 HIS1166 PRO1167 ASN1168 VAL1169 CYS1170 GLU1171 SER1172 CYS1173 GLN1174 LEU1175 GLN1176 MET1177 GLY1178 TYR1179 THR1180 ILE1181 LEU1182 GLU1183 PRO1184 GLY1185 SER1186 ALA1187 TRP1188 ASN1189 THR1190 ARG1199 MET1200 GLU1201 ALA1202 TYR1203 VAL1204 TYR1205 PHE1206 ASP1207 MET1208 GLU1209 GLU1210 ASP1211 THR1212 ARG1213 ILE1214 PHE1215 HIS1216 MET1217 MET1218 GLY1219 LYS1220 PRO1221 ASP1222 GLU1223 THR1224 LYS1225 HIS1226 LEU1227 VAL1228 MET1229 SER1230 ASN1231 GLU1232 GLN1233 ALA1234 ALA1235 ILE1236 SER1237 PRO1238 SER1239 TRP1240 SER1241 ILE1242 HIS1243 SER1244 GLY1245 VAL1246 GLY1247 THR1248 SER1249 ASN1250 TYR1251 SER1252 PHE1253 ILE1254 TRP1255 ALA1256 MET1257 CYS1258 GLY1259 GLU1260
Unit 5 LEU998 GLN999 ASN1000 MET1001 GLU1002 THR1003 ARG1004 TYR1005 THR1006 HIS1007 SER1008 PRO1009 ALA1010 ASP1011 ILE1012 ARG1013 HIS1014 TYR1015 SER1016 THR1017 GLU1018 GLN1019 LEU1020 ARG1021 ASP1022 GLU1023 PHE1024 LEU1025 VAL1026 GLU1027 LYS1028 VAL1029 PHE1030 ILE1031 PRO1032 GLY1033 ALA1034 ILE1035 SER1036 LEU1037 THR1038 TYR1039 THR1040 HIS1041 ASN1042 ASP1043 ARG1044 MET1045 ILE1046 PHE1047 GLY1048 GLY1049 VAL1050 THR1051 PRO1052 THR1053 THR1054 GLU1055 GLU1056 LEU1057 GLU1058 ILE1059 ILE1060 LEU1061 ASP1062 LYS1063 GLU1064 LEU1065 GLY1066 VAL1067 ASP1068 TYR1069 PHE1070 LEU1071 GLU1072 ARG1073 ARG1074 GLU1075 LEU1076 GLY1077 VAL1078 ILE1079 ASN1080 ILE1081 GLY1082 GLY1083 PRO1084 GLY1085 PHE1086 ILE1087 GLU1088 ILE1089 ASP1090 GLY1091 ALA1092 LYS1093 GLU1094 THR1095 MET1096 LYS1097 LYS1098 GLN1099 ASP1100 GLY1101 TYR1102 TYR1103 ILE1104 GLY1105 LYS1106 GLU1107 THR1108 LYS1109 HIS1110 VAL1111 ARG1112 PHE1113 SER1114 SER1115 GLU1116 ASN1117 PRO1118 ASP1119 ASN1120 PRO1121 ALA1122 LYS1123 PHE1124 TYR1125 ILE1126 SER1127 CYS1128 VAL1129 PRO1130 ALA1131 HIS1132 HIS1133 LYS1134 TYR1135 PRO1136 ASN1137 VAL1138 LYS1139 ILE1140 SER1141 ILE1142 ASP1143 GLU1144 ILE1145 THR1146 PRO1147 MET1148 GLU1149 THR1150 GLY1151 ASP1152 PRO1153 LEU1154 THR1155 LEU1156 ASN1157 GLN1158 ARG1159 LYS1160 ILE1161 TYR1162 GLN1163 TYR1164 ILE1165 HIS1166 PRO1167 ASN1168 VAL1169 CYS1170 GLU1171 SER1172 CYS1173 GLN1174 LEU1175 GLN1176 MET1177 GLY1178 TYR1179 THR1180 ILE1181 LEU1182 GLU1183 PRO1184 GLY1185 SER1186 ALA1187 TRP1188 ASN1189 THR1190 MET1200 GLU1201 ALA1202 TYR1203 VAL1204 TYR1205 PHE1206 ASP1207 MET1208 GLU1209 GLU1210 ASP1211 THR1212 ARG1213 ILE1214 PHE1215 HIS1216 MET1217 MET1218 GLY1219 LYS1220 PRO1221 ASP1222 GLU1223 THR1224 LYS1225 HIS1226 LEU1227 VAL1228 MET1229 SER1230 ASN1231 GLU1232 GLN1233 ALA1234 ALA1235 ILE1236 SER1237 PRO1238 SER1239 TRP1240 SER1241 ILE1242 HIS1243 SER1244 GLY1245 VAL1246 GLY1247 THR1248 SER1249 ASN1250 TYR1251 SER1252 PHE1253 ILE1254 TRP1255 ALA1256 MET1257 CYS1258 GLY1259 GLU1260
Unit 6 GLN999 ASN1000 MET1001 GLU1002 THR1003 ARG1004 TYR1005 THR1006 HIS1007 SER1008 PRO1009 ALA1010 ASP1011 ILE1012 ARG1013 HIS1014 TYR1015 SER1016 THR1017 GLU1018 GLN1019 LEU1020 ARG1021 ASP1022 GLU1023 PHE1024 LEU1025 VAL1026 GLU1027 LYS1028 VAL1029 PHE1030 ILE1031 PRO1032 GLY1033 ALA1034 ILE1035 SER1036 LEU1037 THR1038 TYR1039 THR1040 HIS1041 ASN1042 ASP1043 ARG1044 MET1045 ILE1046 PHE1047 GLY1048 GLY1049 VAL1050 THR1051 PRO1052 THR1053 THR1054 GLU1055 GLU1056 LEU1057 GLU1058 ILE1059 ILE1060 LEU1061 ASP1062 LYS1063 GLU1064 LEU1065 GLY1066 VAL1067 ASP1068 TYR1069 PHE1070 LEU1071 GLU1072 ARG1073 ARG1074 GLU1075 LEU1076 GLY1077 VAL1078 ILE1079 ASN1080 ILE1081 GLY1082 GLY1083 PRO1084 GLY1085 PHE1086 ILE1087 GLU1088 ILE1089 ASP1090 GLY1091 ALA1092 LYS1093 GLU1094 THR1095 MET1096 LYS1097 LYS1098 GLN1099 ASP1100 GLY1101 TYR1102 TYR1103 ILE1104 GLY1105 LYS1106 GLU1107 THR1108 LYS1109 HIS1110 VAL1111 ARG1112 PHE1113 SER1114 SER1115 GLU1116 ASN1117 PRO1118 ASP1119 ASN1120 PRO1121 ALA1122 LYS1123 PHE1124 TYR1125 ILE1126 SER1127 CYS1128 VAL1129 PRO1130 ALA1131 HIS1132 HIS1133 LYS1134 TYR1135 PRO1136 ASN1137 VAL1138 LYS1139 ILE1140 SER1141 ILE1142 ASP1143 GLU1144 ILE1145 THR1146 PRO1147 MET1148 GLU1149 THR1150 GLY1151 ASP1152 PRO1153 LEU1154 THR1155 LEU1156 ASN1157 GLN1158 ARG1159 LYS1160 ILE1161 TYR1162 GLN1163 TYR1164 ILE1165 HIS1166 PRO1167 ASN1168 VAL1169 CYS1170 GLU1171 SER1172 CYS1173 GLN1174 LEU1175 GLN1176 MET1177 GLY1178 TYR1179 THR1180 ILE1181 LEU1182 GLU1183 PRO1184 GLY1185 SER1186 ALA1187 TRP1188 ASN1189 THR1190 MET1200 GLU1201 ALA1202 TYR1203 VAL1204 TYR1205 PHE1206 ASP1207 MET1208 GLU1209 GLU1210 ASP1211 THR1212 ARG1213 ILE1214 PHE1215 HIS1216 MET1217 MET1218 GLY1219 LYS1220 PRO1221 ASP1222 GLU1223 THR1224 LYS1225 HIS1226 LEU1227 VAL1228 MET1229 SER1230 ASN1231 GLU1232 GLN1233 ALA1234 ALA1235 ILE1236 SER1237 PRO1238 SER1239 TRP1240 SER1241 ILE1242 HIS1243 SER1244 GLY1245 VAL1246 GLY1247 THR1248 SER1249 ASN1250 TYR1251 SER1252 PHE1253 ILE1254 TRP1255 ALA1256 MET1257 CYS1258 GLY1259 GLU1260
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany