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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF XYLAN BETA-1,4-XYLOSIDASE FROM BACILLUS HALODURANS C-125
Keywords STRUCTURAL GENOMICS, NYSGXRC TARGET T1997, XYLOSIDASE, PSI, STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRU GENOMICS, NYSGRC, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1YRZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   XYLAN BETA-1,4-XYLOSIDASE  A 522 4229 0
2  Protein   XYLAN BETA-1,4-XYLOSIDASE  B 522 4229 0
3 Water     409 0 409
total       1453 8458 409

Proteins
Unit 1 ARG1004 ILE1005 GLN1006 ASN1007 PRO1008 ILE1009 LEU1010 PRO1011 GLY1012 PHE1013 HIS1014 PRO1015 ASP1016 PRO1017 SER1018 ILE1019 VAL1020 ARG1021 VAL1022 GLY1023 ASP1024 ASP1025 TYR1026 TYR1027 ILE1028 ALA1029 THR1030 SER1031 THR1032 PHE1033 GLU1034 TRP1035 PHE1036 PRO1037 GLY1038 VAL1039 ARG1040 ILE1041 HIS1042 HIS1043 SER1044 ARG1045 ASP1046 LEU1047 LYS1048 HIS1049 TRP1050 ARG1051 PHE1052 VAL1053 SER1054 SER1055 PRO1056 LEU1057 THR1058 ARG1059 THR1060 SER1061 GLN1062 LEU1063 ASP1064 MET1065 LYS1066 GLY1067 ASN1068 MET1069 ASN1070 SER1071 GLY1072 GLY1073 ILE1074 TRP1075 ALA1076 PRO1077 CYS1078 LEU1079 SER1080 TYR1081 HIS1082 ASP1083 GLY1084 THR1085 PHE1086 TYR1087 LEU1088 ILE1089 TYR1090 THR1091 ASP1092 VAL1093 LYS1094 GLN1095 TRP1096 HIS1097 GLY1098 ALA1099 PHE1100 LYS1101 ASP1102 ALA1103 HIS1104 ASN1105 TYR1106 LEU1107 VAL1108 THR1109 ALA1110 GLN1111 ASN1112 ILE1113 GLU1114 GLY1115 PRO1116 TRP1117 SER1118 ASP1119 PRO1120 ILE1121 TYR1122 LEU1123 ASN1124 SER1125 SER1126 GLY1127 PHE1128 ASP1129 PRO1130 SER1131 LEU1132 PHE1133 HIS1134 ASP1135 ASP1136 ASP1137 GLY1138 ARG1139 LYS1140 TRP1141 LEU1142 VAL1143 ASN1144 MET1145 ILE1146 TRP1147 ASP1148 TYR1149 ARG1150 LYS1151 GLY1152 ASN1153 HIS1154 PRO1155 PHE1156 ALA1157 GLY1158 ILE1159 ILE1160 LEU1161 GLN1162 GLU1163 TYR1164 SER1165 GLU1166 ALA1167 GLU1168 GLN1169 LYS1170 LEU1171 VAL1172 GLY1173 PRO1174 VAL1175 LYS1176 ASN1177 ILE1178 TYR1179 LYS1180 GLY1181 THR1182 ASP1183 ILE1184 GLN1185 LEU1186 THR1187 GLU1188 GLY1189 PRO1190 HIS1191 LEU1192 TYR1193 LYS1194 LYS1195 ASP1196 GLY1197 TYR1198 TYR1199 TYR1200 LEU1201 LEU1202 VAL1203 ALA1204 GLU1205 GLY1206 GLY1207 THR1208 GLU1209 TYR1210 GLU1211 HIS1212 ALA1213 ALA1214 THR1215 LEU1216 ALA1217 ARG1218 SER1219 GLN1220 SER1221 ILE1222 ASP1223 GLY1224 PRO1225 TYR1226 GLU1227 THR1228 ASP1229 PRO1230 SER1231 TYR1232 PRO1233 LEU1234 VAL1235 THR1236 SER1237 THR1238 GLY1239 GLN1240 PRO1241 GLU1242 LEU1243 ALA1244 LEU1245 GLN1246 LYS1247 ALA1248 GLY1249 HIS1250 GLY1251 SER1252 LEU1253 VAL1254 GLU1255 THR1256 GLN1257 ASN1258 GLY1259 GLU1260 TRP1261 TYR1262 LEU1263 ALA1264 HIS1265 LEU1266 CYS1267 GLY1268 ARG1269 PRO1270 LEU1271 LYS1272 GLY1273 LYS1274 TYR1275 CYS1276 THR1277 LEU1278 GLY1279 ARG1280 GLU1281 THR1282 ALA1283 ILE1284 GLN1285 LYS1286 VAL1287 ASN1288 TRP1289 THR1290 GLU1291 ASP1292 GLY1293 TRP1294 LEU1295 ARG1296 ILE1297 GLU1298 ASP1299 GLY1300 GLY1301 ASN1302 HIS1303 PRO1304 LEU1305 ARG1306 GLU1307 VAL1308 THR1309 ALA1310 PRO1311 ASP1312 LEU1313 PRO1314 GLU1315 HIS1316 PRO1317 PHE1318 GLU1319 LYS1320 GLU1321 PRO1322 GLU1323 LEU1324 ASP1325 ASP1326 PHE1327 ASP1328 ALA1329 PRO1330 GLN1331 LEU1332 HIS1333 HIS1334 GLN1335 TRP1336 ASN1337 THR1338 LEU1339 ARG1340 ILE1341 PRO1342 ALA1343 ASP1344 PRO1345 SER1346 TRP1347 CYS1348 SER1349 LEU1350 GLU1351 GLU1352 ARG1353 PRO1354 GLY1355 HIS1356 LEU1357 ARG1358 LEU1359 ARG1360 GLY1361 MET1362 GLU1363 SER1364 LEU1365 THR1366 SER1367 VAL1368 HIS1369 SER1370 GLN1371 SER1372 LEU1373 VAL1374 ALA1375 ARG1376 ARG1377 GLN1378 GLN1379 SER1380 PHE1381 HIS1382 CYS1383 GLU1384 VAL1385 GLU1386 THR1387 LYS1388 LEU1389 GLU1390 TYR1391 GLN1392 PRO1393 GLU1394 SER1395 PHE1396 GLN1397 HIS1398 MET1399 ALA1400 GLY1401 LEU1402 VAL1403 ILE1404 TYR1405 TYR1406 ASP1407 THR1408 GLU1409 ASP1410 HIS1411 VAL1412 TYR1413 LEU1414 HIS1415 VAL1416 THR1417 TRP1418 HIS1419 GLU1420 GLU1421 LYS1422 GLY1423 LYS1424 CYS1425 LEU1426 GLN1427 ILE1428 ILE1429 GLN1430 THR1431 LYS1432 GLY1433 GLY1434 ASN1435 TYR1436 ASP1437 GLU1438 LEU1439 LEU1440 ALA1441 SER1442 PRO1443 ILE1444 PRO1445 LEU1446 ALA1447 GLU1448 GLU1449 LYS1450 ALA1451 VAL1452 TYR1453 LEU1454 LYS1455 GLY1456 ARG1457 ILE1458 HIS1459 ARG1460 GLU1461 THR1462 MET1463 HIS1464 LEU1465 TYR1466 PHE1467 LYS1468 GLN1469 GLU1470 GLY1471 GLU1472 ALA1473 GLU1474 TRP1475 GLN1476 PRO1477 VAL1478 GLY1479 PRO1480 THR1481 ILE1482 ASP1483 VAL1484 THR1485 HIS1486 MET1487 SER1488 ASP1489 ASP1490 SER1491 ALA1492 LYS1493 GLN1494 VAL1495 ARG1496 PHE1497 THR1498 GLY1499 THR1500 PHE1501 VAL1502 GLY1503 MET1504 ALA1505 THR1506 GLN1507 ASP1508 LEU1509 SER1510 GLY1511 THR1512 LYS1513 LYS1514 PRO1515 ALA1516 ASP1517 PHE1518 ASP1519 TYR1520 PHE1521 ARG1522 TYR1523 LYS1524 GLU1525
Unit 2 ARG2004 ILE2005 GLN2006 ASN2007 PRO2008 ILE2009 LEU2010 PRO2011 GLY2012 PHE2013 HIS2014 PRO2015 ASP2016 PRO2017 SER2018 ILE2019 VAL2020 ARG2021 VAL2022 GLY2023 ASP2024 ASP2025 TYR2026 TYR2027 ILE2028 ALA2029 THR2030 SER2031 THR2032 PHE2033 GLU2034 TRP2035 PHE2036 PRO2037 GLY2038 VAL2039 ARG2040 ILE2041 HIS2042 HIS2043 SER2044 ARG2045 ASP2046 LEU2047 LYS2048 HIS2049 TRP2050 ARG2051 PHE2052 VAL2053 SER2054 SER2055 PRO2056 LEU2057 THR2058 ARG2059 THR2060 SER2061 GLN2062 LEU2063 ASP2064 MET2065 LYS2066 GLY2067 ASN2068 MET2069 ASN2070 SER2071 GLY2072 GLY2073 ILE2074 TRP2075 ALA2076 PRO2077 CYS2078 LEU2079 SER2080 TYR2081 HIS2082 ASP2083 GLY2084 THR2085 PHE2086 TYR2087 LEU2088 ILE2089 TYR2090 THR2091 ASP2092 VAL2093 LYS2094 GLN2095 TRP2096 HIS2097 GLY2098 ALA2099 PHE2100 LYS2101 ASP2102 ALA2103 HIS2104 ASN2105 TYR2106 LEU2107 VAL2108 THR2109 ALA2110 GLN2111 ASN2112 ILE2113 GLU2114 GLY2115 PRO2116 TRP2117 SER2118 ASP2119 PRO2120 ILE2121 TYR2122 LEU2123 ASN2124 SER2125 SER2126 GLY2127 PHE2128 ASP2129 PRO2130 SER2131 LEU2132 PHE2133 HIS2134 ASP2135 ASP2136 ASP2137 GLY2138 ARG2139 LYS2140 TRP2141 LEU2142 VAL2143 ASN2144 MET2145 ILE2146 TRP2147 ASP2148 TYR2149 ARG2150 LYS2151 GLY2152 ASN2153 HIS2154 PRO2155 PHE2156 ALA2157 GLY2158 ILE2159 ILE2160 LEU2161 GLN2162 GLU2163 TYR2164 SER2165 GLU2166 ALA2167 GLU2168 GLN2169 LYS2170 LEU2171 VAL2172 GLY2173 PRO2174 VAL2175 LYS2176 ASN2177 ILE2178 TYR2179 LYS2180 GLY2181 THR2182 ASP2183 ILE2184 GLN2185 LEU2186 THR2187 GLU2188 GLY2189 PRO2190 HIS2191 LEU2192 TYR2193 LYS2194 LYS2195 ASP2196 GLY2197 TYR2198 TYR2199 TYR2200 LEU2201 LEU2202 VAL2203 ALA2204 GLU2205 GLY2206 GLY2207 THR2208 GLU2209 TYR2210 GLU2211 HIS2212 ALA2213 ALA2214 THR2215 LEU2216 ALA2217 ARG2218 SER2219 GLN2220 SER2221 ILE2222 ASP2223 GLY2224 PRO2225 TYR2226 GLU2227 THR2228 ASP2229 PRO2230 SER2231 TYR2232 PRO2233 LEU2234 VAL2235 THR2236 SER2237 THR2238 GLY2239 GLN2240 PRO2241 GLU2242 LEU2243 ALA2244 LEU2245 GLN2246 LYS2247 ALA2248 GLY2249 HIS2250 GLY2251 SER2252 LEU2253 VAL2254 GLU2255 THR2256 GLN2257 ASN2258 GLY2259 GLU2260 TRP2261 TYR2262 LEU2263 ALA2264 HIS2265 LEU2266 CYS2267 GLY2268 ARG2269 PRO2270 LEU2271 LYS2272 GLY2273 LYS2274 TYR2275 CYS2276 THR2277 LEU2278 GLY2279 ARG2280 GLU2281 THR2282 ALA2283 ILE2284 GLN2285 LYS2286 VAL2287 ASN2288 TRP2289 THR2290 GLU2291 ASP2292 GLY2293 TRP2294 LEU2295 ARG2296 ILE2297 GLU2298 ASP2299 GLY2300 GLY2301 ASN2302 HIS2303 PRO2304 LEU2305 ARG2306 GLU2307 VAL2308 THR2309 ALA2310 PRO2311 ASP2312 LEU2313 PRO2314 GLU2315 HIS2316 PRO2317 PHE2318 GLU2319 LYS2320 GLU2321 PRO2322 GLU2323 LEU2324 ASP2325 ASP2326 PHE2327 ASP2328 ALA2329 PRO2330 GLN2331 LEU2332 HIS2333 HIS2334 GLN2335 TRP2336 ASN2337 THR2338 LEU2339 ARG2340 ILE2341 PRO2342 ALA2343 ASP2344 PRO2345 SER2346 TRP2347 CYS2348 SER2349 LEU2350 GLU2351 GLU2352 ARG2353 PRO2354 GLY2355 HIS2356 LEU2357 ARG2358 LEU2359 ARG2360 GLY2361 MET2362 GLU2363 SER2364 LEU2365 THR2366 SER2367 VAL2368 HIS2369 SER2370 GLN2371 SER2372 LEU2373 VAL2374 ALA2375 ARG2376 ARG2377 GLN2378 GLN2379 SER2380 PHE2381 HIS2382 CYS2383 GLU2384 VAL2385 GLU2386 THR2387 LYS2388 LEU2389 GLU2390 TYR2391 GLN2392 PRO2393 GLU2394 SER2395 PHE2396 GLN2397 HIS2398 MET2399 ALA2400 GLY2401 LEU2402 VAL2403 ILE2404 TYR2405 TYR2406 ASP2407 THR2408 GLU2409 ASP2410 HIS2411 VAL2412 TYR2413 LEU2414 HIS2415 VAL2416 THR2417 TRP2418 HIS2419 GLU2420 GLU2421 LYS2422 GLY2423 LYS2424 CYS2425 LEU2426 GLN2427 ILE2428 ILE2429 GLN2430 THR2431 LYS2432 GLY2433 GLY2434 ASN2435 TYR2436 ASP2437 GLU2438 LEU2439 LEU2440 ALA2441 SER2442 PRO2443 ILE2444 PRO2445 LEU2446 ALA2447 GLU2448 GLU2449 LYS2450 ALA2451 VAL2452 TYR2453 LEU2454 LYS2455 GLY2456 ARG2457 ILE2458 HIS2459 ARG2460 GLU2461 THR2462 MET2463 HIS2464 LEU2465 TYR2466 PHE2467 LYS2468 GLN2469 GLU2470 GLY2471 GLU2472 ALA2473 GLU2474 TRP2475 GLN2476 PRO2477 VAL2478 GLY2479 PRO2480 THR2481 ILE2482 ASP2483 VAL2484 THR2485 HIS2486 MET2487 SER2488 ASP2489 ASP2490 SER2491 ALA2492 LYS2493 GLN2494 VAL2495 ARG2496 PHE2497 THR2498 GLY2499 THR2500 PHE2501 VAL2502 GLY2503 MET2504 ALA2505 THR2506 GLN2507 ASP2508 LEU2509 SER2510 GLY2511 THR2512 LYS2513 LYS2514 PRO2515 ALA2516 ASP2517 PHE2518 ASP2519 TYR2520 PHE2521 ARG2522 TYR2523 LYS2524 GLU2525

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany