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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL AND MECHANISTIC ANALYSIS OF TWO PROLYL ENDOPEPTID OF INTER-DOMAIN DYNAMICS IN CATALYSIS AND SPECIFICITY
Keywords PROLYL ENDOPEPTIDASE, MECHANISTIC STUDY, CELIAC SPRUE, HYDRO
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1YR2     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROLYL OLIGOPEPTIDASE  A 680 5251 0
2  Ligand   PROLYL OLIGOPEPTIDASE  A 2 0 12
3 Water     660 0 660
total       1342 5251 672

Proteins
Unit 1 PRO38 PRO39 TYR40 PRO41 ALA42 SER43 PRO44 GLN45 VAL46 PRO47 LEU48 VAL49 GLU50 ASP51 HIS52 PHE53 GLY54 GLU55 LYS56 VAL57 SER58 ASP59 PRO60 TRP61 ARG62 TRP63 LEU64 GLU65 ALA66 ASP67 VAL68 ARG69 THR70 ASP71 ALA72 LYS73 VAL74 ALA75 ALA76 TRP77 VAL78 GLN79 ALA80 GLN81 SER82 ALA83 TYR84 THR85 ALA86 ALA87 TYR88 LEU89 LYS90 GLN91 LEU92 PRO93 GLU94 ARG95 ALA96 ALA97 LEU98 GLU99 LYS100 ARG101 MET102 LYS103 ALA104 LEU105 ILE106 ASP107 TYR108 GLU109 ARG110 PHE111 GLY112 LEU113 PRO114 GLN115 ARG116 ARG117 GLY118 ALA119 SER120 VAL121 PHE122 TYR123 SER124 TRP125 ASN126 SER127 GLY128 LEU129 MET130 ASN131 GLN132 SER133 GLN134 LEU135 LEU136 VAL137 ARG138 PRO139 ALA140 ASP141 ALA142 PRO143 VAL144 GLY145 THR146 LYS147 GLY148 ARG149 VAL150 LEU151 LEU152 ASP153 PRO154 ASN155 THR156 TRP157 ALA162 THR163 ALA164 LEU165 ASP166 ALA167 TRP168 ALA169 ALA170 SER171 ASP172 ASP173 GLY174 ARG175 LEU176 LEU177 ALA178 TYR179 SER180 VAL181 GLN182 ASP183 GLY184 GLY185 SER186 ASP187 TRP188 ARG189 THR190 VAL191 LYS192 PHE193 VAL194 GLY195 VAL196 ALA197 ASP198 GLY199 LYS200 PRO201 LEU202 ALA203 ASP204 GLU205 LEU206 LYS207 TRP208 VAL209 LYS210 PHE211 SER212 GLY213 LEU214 ALA215 TRP216 LEU217 GLY218 ASN219 ASP220 ALA221 LEU222 LEU223 TYR224 SER225 ARG226 PHE227 ALA228 GLU229 PRO230 LEU239 ASN240 TYR241 ASN242 GLN243 THR244 VAL245 TRP246 LEU247 HIS248 ARG249 LEU250 GLY251 THR252 PRO253 GLN254 SER255 ALA256 ASP257 GLN258 PRO259 VAL260 PHE261 ALA262 THR263 PRO264 GLU265 LEU266 PRO267 LYS268 ARG269 GLY270 HIS271 GLY272 ALA273 SER274 VAL275 SER276 SER277 ASP278 GLY279 ARG280 TRP281 VAL282 VAL283 ILE284 THR285 SER286 SER287 GLU288 GLY289 THR290 ASP291 PRO292 VAL293 ASN294 THR295 VAL296 HIS297 VAL298 ALA299 ARG300 VAL301 THR302 ASN303 GLY304 LYS305 ILE306 GLY307 PRO308 VAL309 THR310 ALA311 LEU312 ILE313 PRO314 ASP315 LEU316 LYS317 ALA318 GLN319 TRP320 ASP321 PHE322 VAL323 ASP324 GLY325 VAL326 GLY327 ASP328 GLN329 LEU330 TRP331 PHE332 VAL333 SER334 GLY335 ASP336 GLY337 ALA338 PRO339 LEU340 LYS341 LYS342 ILE343 VAL344 ARG345 VAL346 ASP347 LEU348 SER349 GLY350 SER351 THR352 PRO353 ARG354 PHE355 ASP356 THR357 VAL358 VAL359 PRO360 GLU361 SER362 LYS363 ASP364 ASN365 LEU366 GLU367 SER368 VAL369 GLY370 ILE371 ALA372 GLY373 ASN374 ARG375 LEU376 PHE377 ALA378 SER379 TYR380 ILE381 HIS382 ASP383 ALA384 LYS385 SER386 GLN387 VAL388 LEU389 ALA390 PHE391 ASP392 LEU393 ASP394 GLY395 LYS396 PRO397 ALA398 GLY399 ALA400 VAL401 SER402 LEU403 PRO404 GLY405 ILE406 GLY407 SER408 ALA409 SER410 GLY411 LEU412 SER413 GLY414 ARG415 PRO416 GLY417 ASP418 ARG419 HIS420 ALA421 TYR422 LEU423 SER424 PHE425 SER426 SER427 PHE428 THR429 GLN430 PRO431 ALA432 THR433 VAL434 LEU435 ALA436 LEU437 ASP438 PRO439 ALA440 THR441 ALA442 LYS443 THR444 THR445 PRO446 TRP447 GLU448 PRO449 VAL450 HIS451 LEU452 THR453 PHE454 ASP455 PRO456 ALA457 ASP458 PHE459 ARG460 VAL461 GLU462 GLN463 VAL464 PHE465 TYR466 PRO467 SER468 LYS469 ASP470 GLY471 THR472 LYS473 VAL474 PRO475 MET476 PHE477 ILE478 VAL479 ARG480 ARG481 LYS482 ASP483 ALA484 LYS485 GLY486 PRO487 LEU488 PRO489 THR490 LEU491 LEU492 TYR493 GLY494 TYR495 GLY496 GLY497 PHE498 ASN499 VAL500 ALA501 LEU502 THR503 PRO504 TRP505 PHE506 SER507 ALA508 GLY509 PHE510 MET511 THR512 TRP513 ILE514 ASP515 SER516 GLY517 GLY518 ALA519 PHE520 ALA521 LEU522 ALA523 ASN524 LEU525 ARG526 GLY527 GLY528 GLY529 GLU530 TYR531 GLY532 ASP533 ALA534 TRP535 HIS536 ASP537 ALA538 GLY539 ARG540 ARG541 ASP542 LYS543 LYS544 GLN545 ASN546 VAL547 PHE548 ASP549 ASP550 PHE551 ILE552 ALA553 ALA554 GLY555 GLU556 TRP557 LEU558 ILE559 ALA560 ASN561 GLY562 VAL563 THR564 PRO565 ARG566 HIS567 GLY568 LEU569 ALA570 ILE571 GLU572 GLY573 GLY574 SER575 ASN576 GLY577 GLY578 LEU579 LEU580 ILE581 GLY582 ALA583 VAL584 THR585 ASN586 GLN587 ARG588 PRO589 ASP590 LEU591 PHE592 ALA593 ALA594 ALA595 SER596 PRO597 ALA598 VAL599 GLY600 VAL601 MET602 ASP603 MET604 LEU605 ARG606 PHE607 ASP608 GLN609 PHE610 THR611 ALA612 GLY613 ARG614 TYR615 TRP616 VAL617 ASP618 ASP619 TYR620 GLY621 TYR622 PRO623 GLU624 LYS625 GLU626 ALA627 ASP628 TRP629 ARG630 VAL631 LEU632 ARG633 ARG634 TYR635 SER636 PRO637 TYR638 HIS639 ASN640 VAL641 ARG642 SER643 GLY644 VAL645 ASP646 TYR647 PRO648 ALA649 ILE650 LEU651 VAL652 THR653 THR654 ALA655 ASP656 THR657 ASP658 ASP659 ARG660 VAL661 VAL662 PRO663 GLY664 HIS665 SER666 PHE667 LYS668 TYR669 THR670 ALA671 ALA672 LEU673 GLN674 THR675 ALA676 ALA677 ILE678 GLY679 PRO680 LYS681 PRO682 HIS683 LEU684 ILE685 ARG686 ILE687 GLU688 PRO698 ILE699 ASP700 LYS701 GLN702 ILE703 GLU704 GLU705 THR706 ALA707 ASP708 VAL709 GLN710 ALA711 PHE712 LEU713 ALA714 HIS715 PHE716 THR717 GLY718 LEU719 THR720 PRO721 ARG722 PRO723 TRP724 SER725 SER726 VAL727 ASP728 LYS729 LEU730 ALA731 ALA732 ALA733 LEU734 GLU735 HIS736 HIS737 HIS738

Ligands
Unit 2 GOL750 GOL755

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany