1YMM - Sequence, Chains, Asymmetric and Biological Units

• Title: TCR/HLA-DR2B/MBP-PEPTIDE COMPLEX
• Keywords: PROTEIN-PROTEIN COMPLEX, T CELL REPERTOIRE, AUTO-IMMUNITY, I SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YMM	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	182	1494	0
2	Protein		B	178	1466	0
3	Protein	MBP PEPTIDE	C	14	116	0
4	Protein	T CELL RECEPTOR ALPHA CHAIN	D	96	750	0
5	Protein	T-CELL RECEPTOR BETA CHAIN	E	246	1948	0
6	Ligand		A	1	0	15
total				717	5774	15

Proteins

Unit 1	LYS 2 GLU 3 GLU 4 HIS 5 VAL 6 ILE 7 ILE 8 GLN 9 ALA 10 GLU 11 PHE 12 TYR 13 LEU 14 ASN 15 PRO 16 ASP 17 GLN 18 SER 19 GLY 20 GLU 21 PHE 22 MET 23 PHE 24 ASP 25 PHE 26 ASP 27 GLY 28 ASP 29 GLU 30 ILE 31 PHE 32 HIS 33 VAL 34 ASP 35 MET 36 ALA 37 LYS 38 LYS 39 GLU 40 THR 41 VAL 42 TRP 43 ARG 44 LEU 45 GLU 46 GLU 47 PHE 48 GLY 49 ARG 50 PHE 51 ALA 52 SER 53 PHE 54 GLU 55 ALA 56 GLN 57 GLY 58 ALA 59 LEU 60 ALA 61 ASN 62 ILE 63 ALA 64 VAL 65 ASP 66 LYS 67 ALA 68 ASN 69 LEU 70 GLU 71 ILE 72 MET 73 THR 74 LYS 75 ARG 76 SER 77 ASN 78 TYR 79 THR 80 PRO 81 ILE 82 THR 83 ASN 84 VAL 85 PRO 86 PRO 87 GLU 88 VAL 89 THR 90 VAL 91 LEU 92 THR 93 ASN 94 SER 95 PRO 96 VAL 97 GLU 98 LEU 99 ARG 100 GLU 101 PRO 102 ASN 103 VAL 104 LEU 105 ILE 106 CYS 107 PHE 108 ILE 109 ASP 110 LYS 111 PHE 112 THR 113 PRO 114 PRO 115 VAL 116 VAL 117 ASN 118 VAL 119 THR 120 TRP 121 LEU 122 ARG 123 ASN 124 GLY 125 LYS 126 PRO 127 VAL 128 THR 129 THR 130 GLY 131 VAL 132 SER 133 GLU 134 THR 135 VAL 136 PHE 137 LEU 138 PRO 139 ARG 140 GLU 141 ASP 142 HIS 143 LEU 144 PHE 145 ARG 146 LYS 147 PHE 148 HIS 149 TYR 150 LEU 151 PRO 152 PHE 153 LEU 154 PRO 155 SER 156 THR 157 GLU 158 ASP 159 VAL 160 TYR 161 ASP 162 CYS 163 ARG 164 VAL 165 GLU 166 HIS 167 TRP 168 GLY 169 LEU 170 ASP 171 GLU 172 PRO 173 LEU 174 LEU 175 LYS 176 HIS 177 TRP 178 GLU 179 PHE 180 ASP 181 ALA 182 PRO 183
Unit 2	THR 3 ARG 4 PRO 5 ARG 6 PHE 7 LEU 8 TRP 9 GLN 10 PRO 11 LYS 12 ARG 13 GLU 14 CYS 15 HIS 16 PHE 17 PHE 18 ASN 19 GLY 20 THR 21 GLU 22 ARG 23 VAL 24 ARG 25 PHE 26 LEU 27 ASP 28 ARG 29 TYR 30 PHE 31 TYR 32 ASN 33 GLN 34 GLU 35 GLU 36 SER 37 VAL 38 ARG 39 PHE 40 ASP 41 SER 42 ASP 43 VAL 44 GLY 45 GLU 46 PHE 47 ARG 48 ALA 49 VAL 50 THR 51 GLU 52 LEU 53 GLY 54 ARG 55 PRO 56 ASP 57 ALA 58 GLU 59 TYR 60 TRP 61 ASN 62 SER 63 GLN 64 LYS 65 ASP 66 ILE 67 LEU 68 GLU 69 GLN 70 ALA 71 ARG 72 ALA 73 ALA 74 VAL 75 ASP 76 THR 77 TYR 78 CYS 79 ARG 80 HIS 81 ASN 82 TYR 83 GLY 84 VAL 85 VAL 86 GLU 87 SER 88 PHE 89 THR 90 VAL 91 GLN 92 ARG 93 ARG 94 VAL 95 GLN 96 PRO 97 LYS 98 VAL 99 THR 100 VAL 101 TYR 102 PRO 103 SER 104 LEU 114 LEU 115 VAL 116 CYS 117 SER 118 VAL 119 SER 120 GLY 121 PHE 122 TYR 123 PRO 124 GLY 125 SER 126 ILE 127 GLU 128 VAL 129 ARG 130 TRP 131 PHE 132 LEU 133 ASN 134 GLY 135 GLN 136 GLU 137 GLU 138 LYS 139 ALA 140 GLY 141 MET 142 VAL 143 SER 144 THR 145 GLY 146 LEU 147 ILE 148 GLN 149 ASN 150 GLY 151 ASP 152 TRP 153 THR 154 PHE 155 GLN 156 THR 157 LEU 158 VAL 159 MET 160 LEU 161 GLU 162 THR 163 VAL 164 PRO 165 ARG 166 SER 167 GLY 168 GLU 169 VAL 170 TYR 171 THR 172 CYS 173 GLN 174 VAL 175 GLU 176 HIS 177 PRO 178 SER 179 VAL 180 THR 181 SER 182 PRO 183 LEU 184 THR 185 VAL 186 GLU 187 TRP 188 ARG 189
Unit 3	GLU 85 ASN 86 PRO 87 VAL 88 VAL 89 HIS 90 PHE 91 PHE 92 LYS 93 ASN 94 ILE 95 VAL 96 THR 97 PRO 98
Unit 4	GLN 9 ALA 10 LEU 11 SER 12 ILE 13 GLN 14 GLU 15 GLY 16 GLU 17 ASN 18 ALA 19 THR 20 MET 21 ASN 22 CYS 23 SER 24 TYR 25 LYS 26 THR 27 SER 28 ILE 29 ASN 30 ASN 31 LEU 32 GLN 33 TRP 34 TYR 35 ARG 36 GLN 37 ASN 38 SER 39 GLY 40 ARG 41 GLY 42 LEU 43 VAL 44 HIS 45 LEU 46 ILE 47 LEU 48 ILE 49 ARG 50 SER 51 ASN 52 GLU 53 ARG 54 GLU 55 LYS 56 HIS 57 SER 58 GLY 59 ARG 60 LEU 61 ARG 62 VAL 63 THR 64 LEU 65 ASP 66 THR 67 SER 68 LYS 69 LYS 70 SER 71 SER 72 SER 73 LEU 74 LEU 75 ILE 76 THR 77 ALA 78 SER 79 ARG 80 ALA 81 ALA 82 ASP 83 THR 84 ALA 85 SER 86 TYR 87 PHE 88 CYS 89 ALA 90 THR 91 ASP 92 THR 93 THR 94 SER 95 GLY 96 THR 97 TYR 98 LYS 99 TYR 100 ILE 101 PHE 102 GLY 103 THR 104
Unit 5	GLY 1 ALA 2 VAL 3 VAL 4 SER 5 GLN 6 HIS 7 PRO 8 SER 9 TRP 10 VAL 11 ILE 12 SER 13 LYS 14 SER 15 GLY 16 THR 17 SER 18 VAL 19 LYS 20 ILE 21 GLU 22 CYS 23 ARG 24 SER 25 LEU 26 ASP 27 PHE 28 GLN 29 ALA 30 THR 31 THR 32 MET 33 PHE 34 TRP 35 TYR 36 ARG 37 GLN 38 PHE 39 PRO 40 LYS 41 GLN 42 SER 43 LEU 44 MET 45 LEU 46 MET 47 ALA 48 THR 49 SER 50 ASN 51 GLU 52 GLY 53 SER 54 LYS 55 ALA 56 THR 57 TYR 58 GLU 59 GLN 60 GLY 61 VAL 62 GLU 63 LYS 64 ASP 65 LYS 66 PHE 67 LEU 68 ILE 69 ASN 70 HIS 71 ALA 72 SER 73 LEU 74 THR 75 LEU 76 SER 77 THR 78 LEU 79 THR 80 VAL 81 THR 82 SER 83 ALA 84 HIS 85 PRO 86 GLU 87 ASP 88 SER 89 SER 90 PHE 91 TYR 92 ILE 93 CYS 94 SER 95 ALA 96 ARG 97 ASP 98 LEU 99 THR 100 SER 101 GLY 102 ALA 103 ASN 104 ASN 105 GLU 106 GLN 107 PHE 108 PHE 109 GLY 110 PRO 111 GLY 112 THR 113 ARG 114 LEU 115 THR 116 VAL 117 LEU 118 GLU 119 ASP 120 LEU 121 LYS 122 ASN 123 VAL 124 PHE 125 PRO 126 PRO 127 GLU 128 VAL 129 ALA 130 VAL 131 PHE 132 GLU 133 PRO 134 SER 135 GLU 136 ALA 137 GLU 138 ILE 139 SER 140 HIS 141 THR 142 GLN 143 LYS 144 ALA 145 THR 146 LEU 147 VAL 148 CYS 149 LEU 150 ALA 151 THR 152 GLY 153 PHE 154 TYR 155 PRO 156 ASP 157 HIS 158 VAL 159 GLU 160 LEU 161 SER 162 TRP 163 TRP 164 VAL 165 ASN 166 GLY 167 LYS 168 GLU 169 VAL 170 HIS 171 SER 172 GLY 173 VAL 174 SER 175 THR 176 ASP 177 PRO 178 GLN 179 PRO 180 LEU 181 LYS 182 GLU 183 GLN 184 PRO 185 ALA 186 LEU 187 ASN 188 ASP 189 SER 190 ARG 191 TYR 192 SER 193 LEU 194 SER 195 SER 196 ARG 197 LEU 198 ARG 199 VAL 200 SER 201 ALA 202 THR 203 PHE 204 TRP 205 GLN 206 ASN 207 PRO 208 ARG 209 ASN 210 HIS 211 PHE 212 ARG 213 CYS 214 GLN 215 VAL 216 GLN 217 PHE 218 TYR 219 GLY 220 LEU 221 SER 222 GLU 223 ASN 224 ASP 225 GLU 226 TRP 227 THR 228 GLN 229 ASP 230 ARG 231 ALA 232 LYS 233 PRO 234 VAL 235 THR 236 GLN 237 ILE 238 VAL 239 SER 240 ALA 241 GLU 242 ALA 243 TRP 244 GLY 245 ARG 246

Ligands

Unit 6

NAG 192