1YKF - Sequence, Chains, Asymmetric and Biological Units

• Title: NADP-DEPENDENT ALCOHOL DEHYDROGENASE FROM THERMOANAEROBIUM BROCKII
• Keywords: OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YKF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	A	352	2643	0
2	Protein	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	B	352	2643	0
3	Protein	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	C	352	2643	0
4	Protein	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	D	352	2643	0
5	Ligand	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	A	2	0	49
6	Ligand	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	B	2	0	49
7	Ligand	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	C	2	0	49
8	Ligand	NADP-DEPENDENT ALCOHOL DEHYDROGENASE	D	2	0	49
9	Water			43	0	43
total				1459	10572	239

Proteins

Unit 1	MET 1 LYS 2 GLY 3 PHE 4 ALA 5 MET 6 LEU 7 SER 8 ILE 9 GLY 10 LYS 11 VAL 12 GLY 13 TRP 14 ILE 15 GLU 16 LYS 17 GLU 18 LYS 19 PRO 20 ALA 21 PRO 22 GLY 23 PRO 24 PHE 25 ASP 26 ALA 27 ILE 28 VAL 29 ARG 30 PRO 31 LEU 32 ALA 33 VAL 34 ALA 35 PRO 36 CYS 37 THR 38 SER 39 ASP 40 ILE 41 HIS 42 THR 43 VAL 44 PHE 45 GLU 46 GLY 47 ALA 48 ILE 49 GLY 50 GLU 51 ARG 52 HIS 53 ASN 54 MET 55 ILE 56 LEU 57 GLY 58 HIS 59 GLU 60 ALA 61 VAL 62 GLY 63 GLU 64 VAL 65 VAL 66 GLU 67 VAL 68 GLY 69 SER 70 GLU 71 VAL 72 LYS 73 ASP 74 PHE 75 LYS 76 PRO 77 GLY 78 ASP 79 ARG 80 VAL 81 VAL 82 VAL 83 PRO 84 ALA 85 ILE 86 THR 87 PRO 88 ASP 89 TRP 90 ARG 91 THR 92 SER 93 GLU 94 VAL 95 GLN 96 ARG 97 GLY 98 TYR 99 HIS 100 GLN 101 HIS 102 SER 103 GLY 104 GLY 105 MET 106 LEU 107 ALA 108 GLY 109 TRP 110 LYS 111 PHE 112 SER 113 ASN 114 VAL 115 LYS 116 ASP 117 GLY 118 VAL 119 PHE 120 GLY 121 GLU 122 PHE 123 PHE 124 HIS 125 VAL 126 ASN 127 ASP 128 ALA 129 ASP 130 MET 131 ASN 132 LEU 133 ALA 134 HIS 135 LEU 136 PRO 137 LYS 138 GLU 139 ILE 140 PRO 141 LEU 142 GLU 143 ALA 144 ALA 145 VAL 146 MET 147 ILE 148 PRO 149 ASP 150 MET 151 MET 152 THR 153 THR 154 GLY 155 PHE 156 HIS 157 GLY 158 ALA 159 GLU 160 LEU 161 ALA 162 ASP 163 ILE 164 GLU 165 LEU 166 GLY 167 ALA 168 THR 169 VAL 170 ALA 171 VAL 172 LEU 173 GLY 174 ILE 175 GLY 176 PRO 177 VAL 178 GLY 179 LEU 180 MET 181 ALA 182 VAL 183 ALA 184 GLY 185 ALA 186 LYS 187 LEU 188 ARG 189 GLY 190 ALA 191 GLY 192 ARG 193 ILE 194 ILE 195 ALA 196 VAL 197 GLY 198 SER 199 ARG 200 PRO 201 VAL 202 CYS 203 VAL 204 ASP 205 ALA 206 ALA 207 LYS 208 TYR 209 TYR 210 GLY 211 ALA 212 THR 213 ASP 214 ILE 215 VAL 216 ASN 217 TYR 218 LYS 219 ASP 220 GLY 221 PRO 222 ILE 223 GLU 224 SER 225 GLN 226 ILE 227 MET 228 ASN 229 LEU 230 THR 231 GLU 232 GLY 233 LYS 234 GLY 235 VAL 236 ASP 237 ALA 238 ALA 239 ILE 240 ILE 241 ALA 242 GLY 243 GLY 244 ASN 245 ALA 246 ASP 247 ILE 248 MET 249 ALA 250 THR 251 ALA 252 VAL 253 LYS 254 ILE 255 VAL 256 LYS 257 PRO 258 GLY 259 GLY 260 THR 261 ILE 262 ALA 263 ASN 264 VAL 265 ASN 266 TYR 267 PHE 268 GLY 269 GLU 270 GLY 271 GLU 272 VAL 273 LEU 274 PRO 275 VAL 276 PRO 277 ARG 278 LEU 279 GLU 280 TRP 281 GLY 282 CYS 283 GLY 284 MET 285 ALA 286 HIS 287 LYS 288 THR 289 ILE 290 LYS 291 GLY 292 GLY 293 LEU 294 CYS 295 PRO 296 GLY 297 GLY 298 ARG 299 LEU 300 ARG 301 MET 302 GLU 303 ARG 304 LEU 305 ILE 306 ASP 307 LEU 308 VAL 309 PHE 310 TYR 311 LYS 312 ARG 313 VAL 314 ASP 315 PRO 316 SER 317 LYS 318 LEU 319 VAL 320 THR 321 HIS 322 VAL 323 PHE 324 ARG 325 GLY 326 PHE 327 ASP 328 ASN 329 ILE 330 GLU 331 LYS 332 ALA 333 PHE 334 MET 335 LEU 336 MET 337 LYS 338 ASP 339 LYS 340 PRO 341 LYS 342 ASP 343 LEU 344 ILE 345 LYS 346 PRO 347 VAL 348 VAL 349 ILE 350 LEU 351 ALA 352
Unit 2	MET 1 LYS 2 GLY 3 PHE 4 ALA 5 MET 6 LEU 7 SER 8 ILE 9 GLY 10 LYS 11 VAL 12 GLY 13 TRP 14 ILE 15 GLU 16 LYS 17 GLU 18 LYS 19 PRO 20 ALA 21 PRO 22 GLY 23 PRO 24 PHE 25 ASP 26 ALA 27 ILE 28 VAL 29 ARG 30 PRO 31 LEU 32 ALA 33 VAL 34 ALA 35 PRO 36 CYS 37 THR 38 SER 39 ASP 40 ILE 41 HIS 42 THR 43 VAL 44 PHE 45 GLU 46 GLY 47 ALA 48 ILE 49 GLY 50 GLU 51 ARG 52 HIS 53 ASN 54 MET 55 ILE 56 LEU 57 GLY 58 HIS 59 GLU 60 ALA 61 VAL 62 GLY 63 GLU 64 VAL 65 VAL 66 GLU 67 VAL 68 GLY 69 SER 70 GLU 71 VAL 72 LYS 73 ASP 74 PHE 75 LYS 76 PRO 77 GLY 78 ASP 79 ARG 80 VAL 81 VAL 82 VAL 83 PRO 84 ALA 85 ILE 86 THR 87 PRO 88 ASP 89 TRP 90 ARG 91 THR 92 SER 93 GLU 94 VAL 95 GLN 96 ARG 97 GLY 98 TYR 99 HIS 100 GLN 101 HIS 102 SER 103 GLY 104 GLY 105 MET 106 LEU 107 ALA 108 GLY 109 TRP 110 LYS 111 PHE 112 SER 113 ASN 114 VAL 115 LYS 116 ASP 117 GLY 118 VAL 119 PHE 120 GLY 121 GLU 122 PHE 123 PHE 124 HIS 125 VAL 126 ASN 127 ASP 128 ALA 129 ASP 130 MET 131 ASN 132 LEU 133 ALA 134 HIS 135 LEU 136 PRO 137 LYS 138 GLU 139 ILE 140 PRO 141 LEU 142 GLU 143 ALA 144 ALA 145 VAL 146 MET 147 ILE 148 PRO 149 ASP 150 MET 151 MET 152 THR 153 THR 154 GLY 155 PHE 156 HIS 157 GLY 158 ALA 159 GLU 160 LEU 161 ALA 162 ASP 163 ILE 164 GLU 165 LEU 166 GLY 167 ALA 168 THR 169 VAL 170 ALA 171 VAL 172 LEU 173 GLY 174 ILE 175 GLY 176 PRO 177 VAL 178 GLY 179 LEU 180 MET 181 ALA 182 VAL 183 ALA 184 GLY 185 ALA 186 LYS 187 LEU 188 ARG 189 GLY 190 ALA 191 GLY 192 ARG 193 ILE 194 ILE 195 ALA 196 VAL 197 GLY 198 SER 199 ARG 200 PRO 201 VAL 202 CYS 203 VAL 204 ASP 205 ALA 206 ALA 207 LYS 208 TYR 209 TYR 210 GLY 211 ALA 212 THR 213 ASP 214 ILE 215 VAL 216 ASN 217 TYR 218 LYS 219 ASP 220 GLY 221 PRO 222 ILE 223 GLU 224 SER 225 GLN 226 ILE 227 MET 228 ASN 229 LEU 230 THR 231 GLU 232 GLY 233 LYS 234 GLY 235 VAL 236 ASP 237 ALA 238 ALA 239 ILE 240 ILE 241 ALA 242 GLY 243 GLY 244 ASN 245 ALA 246 ASP 247 ILE 248 MET 249 ALA 250 THR 251 ALA 252 VAL 253 LYS 254 ILE 255 VAL 256 LYS 257 PRO 258 GLY 259 GLY 260 THR 261 ILE 262 ALA 263 ASN 264 VAL 265 ASN 266 TYR 267 PHE 268 GLY 269 GLU 270 GLY 271 GLU 272 VAL 273 LEU 274 PRO 275 VAL 276 PRO 277 ARG 278 LEU 279 GLU 280 TRP 281 GLY 282 CYS 283 GLY 284 MET 285 ALA 286 HIS 287 LYS 288 THR 289 ILE 290 LYS 291 GLY 292 GLY 293 LEU 294 CYS 295 PRO 296 GLY 297 GLY 298 ARG 299 LEU 300 ARG 301 MET 302 GLU 303 ARG 304 LEU 305 ILE 306 ASP 307 LEU 308 VAL 309 PHE 310 TYR 311 LYS 312 ARG 313 VAL 314 ASP 315 PRO 316 SER 317 LYS 318 LEU 319 VAL 320 THR 321 HIS 322 VAL 323 PHE 324 ARG 325 GLY 326 PHE 327 ASP 328 ASN 329 ILE 330 GLU 331 LYS 332 ALA 333 PHE 334 MET 335 LEU 336 MET 337 LYS 338 ASP 339 LYS 340 PRO 341 LYS 342 ASP 343 LEU 344 ILE 345 LYS 346 PRO 347 VAL 348 VAL 349 ILE 350 LEU 351 ALA 352
Unit 3	MET 1 LYS 2 GLY 3 PHE 4 ALA 5 MET 6 LEU 7 SER 8 ILE 9 GLY 10 LYS 11 VAL 12 GLY 13 TRP 14 ILE 15 GLU 16 LYS 17 GLU 18 LYS 19 PRO 20 ALA 21 PRO 22 GLY 23 PRO 24 PHE 25 ASP 26 ALA 27 ILE 28 VAL 29 ARG 30 PRO 31 LEU 32 ALA 33 VAL 34 ALA 35 PRO 36 CYS 37 THR 38 SER 39 ASP 40 ILE 41 HIS 42 THR 43 VAL 44 PHE 45 GLU 46 GLY 47 ALA 48 ILE 49 GLY 50 GLU 51 ARG 52 HIS 53 ASN 54 MET 55 ILE 56 LEU 57 GLY 58 HIS 59 GLU 60 ALA 61 VAL 62 GLY 63 GLU 64 VAL 65 VAL 66 GLU 67 VAL 68 GLY 69 SER 70 GLU 71 VAL 72 LYS 73 ASP 74 PHE 75 LYS 76 PRO 77 GLY 78 ASP 79 ARG 80 VAL 81 VAL 82 VAL 83 PRO 84 ALA 85 ILE 86 THR 87 PRO 88 ASP 89 TRP 90 ARG 91 THR 92 SER 93 GLU 94 VAL 95 GLN 96 ARG 97 GLY 98 TYR 99 HIS 100 GLN 101 HIS 102 SER 103 GLY 104 GLY 105 MET 106 LEU 107 ALA 108 GLY 109 TRP 110 LYS 111 PHE 112 SER 113 ASN 114 VAL 115 LYS 116 ASP 117 GLY 118 VAL 119 PHE 120 GLY 121 GLU 122 PHE 123 PHE 124 HIS 125 VAL 126 ASN 127 ASP 128 ALA 129 ASP 130 MET 131 ASN 132 LEU 133 ALA 134 HIS 135 LEU 136 PRO 137 LYS 138 GLU 139 ILE 140 PRO 141 LEU 142 GLU 143 ALA 144 ALA 145 VAL 146 MET 147 ILE 148 PRO 149 ASP 150 MET 151 MET 152 THR 153 THR 154 GLY 155 PHE 156 HIS 157 GLY 158 ALA 159 GLU 160 LEU 161 ALA 162 ASP 163 ILE 164 GLU 165 LEU 166 GLY 167 ALA 168 THR 169 VAL 170 ALA 171 VAL 172 LEU 173 GLY 174 ILE 175 GLY 176 PRO 177 VAL 178 GLY 179 LEU 180 MET 181 ALA 182 VAL 183 ALA 184 GLY 185 ALA 186 LYS 187 LEU 188 ARG 189 GLY 190 ALA 191 GLY 192 ARG 193 ILE 194 ILE 195 ALA 196 VAL 197 GLY 198 SER 199 ARG 200 PRO 201 VAL 202 CYS 203 VAL 204 ASP 205 ALA 206 ALA 207 LYS 208 TYR 209 TYR 210 GLY 211 ALA 212 THR 213 ASP 214 ILE 215 VAL 216 ASN 217 TYR 218 LYS 219 ASP 220 GLY 221 PRO 222 ILE 223 GLU 224 SER 225 GLN 226 ILE 227 MET 228 ASN 229 LEU 230 THR 231 GLU 232 GLY 233 LYS 234 GLY 235 VAL 236 ASP 237 ALA 238 ALA 239 ILE 240 ILE 241 ALA 242 GLY 243 GLY 244 ASN 245 ALA 246 ASP 247 ILE 248 MET 249 ALA 250 THR 251 ALA 252 VAL 253 LYS 254 ILE 255 VAL 256 LYS 257 PRO 258 GLY 259 GLY 260 THR 261 ILE 262 ALA 263 ASN 264 VAL 265 ASN 266 TYR 267 PHE 268 GLY 269 GLU 270 GLY 271 GLU 272 VAL 273 LEU 274 PRO 275 VAL 276 PRO 277 ARG 278 LEU 279 GLU 280 TRP 281 GLY 282 CYS 283 GLY 284 MET 285 ALA 286 HIS 287 LYS 288 THR 289 ILE 290 LYS 291 GLY 292 GLY 293 LEU 294 CYS 295 PRO 296 GLY 297 GLY 298 ARG 299 LEU 300 ARG 301 MET 302 GLU 303 ARG 304 LEU 305 ILE 306 ASP 307 LEU 308 VAL 309 PHE 310 TYR 311 LYS 312 ARG 313 VAL 314 ASP 315 PRO 316 SER 317 LYS 318 LEU 319 VAL 320 THR 321 HIS 322 VAL 323 PHE 324 ARG 325 GLY 326 PHE 327 ASP 328 ASN 329 ILE 330 GLU 331 LYS 332 ALA 333 PHE 334 MET 335 LEU 336 MET 337 LYS 338 ASP 339 LYS 340 PRO 341 LYS 342 ASP 343 LEU 344 ILE 345 LYS 346 PRO 347 VAL 348 VAL 349 ILE 350 LEU 351 ALA 352
Unit 4	MET 1 LYS 2 GLY 3 PHE 4 ALA 5 MET 6 LEU 7 SER 8 ILE 9 GLY 10 LYS 11 VAL 12 GLY 13 TRP 14 ILE 15 GLU 16 LYS 17 GLU 18 LYS 19 PRO 20 ALA 21 PRO 22 GLY 23 PRO 24 PHE 25 ASP 26 ALA 27 ILE 28 VAL 29 ARG 30 PRO 31 LEU 32 ALA 33 VAL 34 ALA 35 PRO 36 CYS 37 THR 38 SER 39 ASP 40 ILE 41 HIS 42 THR 43 VAL 44 PHE 45 GLU 46 GLY 47 ALA 48 ILE 49 GLY 50 GLU 51 ARG 52 HIS 53 ASN 54 MET 55 ILE 56 LEU 57 GLY 58 HIS 59 GLU 60 ALA 61 VAL 62 GLY 63 GLU 64 VAL 65 VAL 66 GLU 67 VAL 68 GLY 69 SER 70 GLU 71 VAL 72 LYS 73 ASP 74 PHE 75 LYS 76 PRO 77 GLY 78 ASP 79 ARG 80 VAL 81 VAL 82 VAL 83 PRO 84 ALA 85 ILE 86 THR 87 PRO 88 ASP 89 TRP 90 ARG 91 THR 92 SER 93 GLU 94 VAL 95 GLN 96 ARG 97 GLY 98 TYR 99 HIS 100 GLN 101 HIS 102 SER 103 GLY 104 GLY 105 MET 106 LEU 107 ALA 108 GLY 109 TRP 110 LYS 111 PHE 112 SER 113 ASN 114 VAL 115 LYS 116 ASP 117 GLY 118 VAL 119 PHE 120 GLY 121 GLU 122 PHE 123 PHE 124 HIS 125 VAL 126 ASN 127 ASP 128 ALA 129 ASP 130 MET 131 ASN 132 LEU 133 ALA 134 HIS 135 LEU 136 PRO 137 LYS 138 GLU 139 ILE 140 PRO 141 LEU 142 GLU 143 ALA 144 ALA 145 VAL 146 MET 147 ILE 148 PRO 149 ASP 150 MET 151 MET 152 THR 153 THR 154 GLY 155 PHE 156 HIS 157 GLY 158 ALA 159 GLU 160 LEU 161 ALA 162 ASP 163 ILE 164 GLU 165 LEU 166 GLY 167 ALA 168 THR 169 VAL 170 ALA 171 VAL 172 LEU 173 GLY 174 ILE 175 GLY 176 PRO 177 VAL 178 GLY 179 LEU 180 MET 181 ALA 182 VAL 183 ALA 184 GLY 185 ALA 186 LYS 187 LEU 188 ARG 189 GLY 190 ALA 191 GLY 192 ARG 193 ILE 194 ILE 195 ALA 196 VAL 197 GLY 198 SER 199 ARG 200 PRO 201 VAL 202 CYS 203 VAL 204 ASP 205 ALA 206 ALA 207 LYS 208 TYR 209 TYR 210 GLY 211 ALA 212 THR 213 ASP 214 ILE 215 VAL 216 ASN 217 TYR 218 LYS 219 ASP 220 GLY 221 PRO 222 ILE 223 GLU 224 SER 225 GLN 226 ILE 227 MET 228 ASN 229 LEU 230 THR 231 GLU 232 GLY 233 LYS 234 GLY 235 VAL 236 ASP 237 ALA 238 ALA 239 ILE 240 ILE 241 ALA 242 GLY 243 GLY 244 ASN 245 ALA 246 ASP 247 ILE 248 MET 249 ALA 250 THR 251 ALA 252 VAL 253 LYS 254 ILE 255 VAL 256 LYS 257 PRO 258 GLY 259 GLY 260 THR 261 ILE 262 ALA 263 ASN 264 VAL 265 ASN 266 TYR 267 PHE 268 GLY 269 GLU 270 GLY 271 GLU 272 VAL 273 LEU 274 PRO 275 VAL 276 PRO 277 ARG 278 LEU 279 GLU 280 TRP 281 GLY 282 CYS 283 GLY 284 MET 285 ALA 286 HIS 287 LYS 288 THR 289 ILE 290 LYS 291 GLY 292 GLY 293 LEU 294 CYS 295 PRO 296 GLY 297 GLY 298 ARG 299 LEU 300 ARG 301 MET 302 GLU 303 ARG 304 LEU 305 ILE 306 ASP 307 LEU 308 VAL 309 PHE 310 TYR 311 LYS 312 ARG 313 VAL 314 ASP 315 PRO 316 SER 317 LYS 318 LEU 319 VAL 320 THR 321 HIS 322 VAL 323 PHE 324 ARG 325 GLY 326 PHE 327 ASP 328 ASN 329 ILE 330 GLU 331 LYS 332 ALA 333 PHE 334 MET 335 LEU 336 MET 337 LYS 338 ASP 339 LYS 340 PRO 341 LYS 342 ASP 343 LEU 344 ILE 345 LYS 346 PRO 347 VAL 348 VAL 349 ILE 350 LEU 351 ALA 352

Ligands

Unit 5	NAP 353 ZN 354
Unit 6	NAP 353 ZN 354
Unit 7	NAP 353 ZN 354
Unit 8	NAP 353 ZN 354