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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF INSECT CELL EXPRESSED IL-22
Keywords INTERLEUKIN, CYTOKINE, IL-22, GLYCOSYLATION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1YKB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN (INTERLEUKIN-22)  A 141 1141 0
2  Protein   PROTEIN (INTERLEUKIN-22)  B 142 1147 0
3  Protein   PROTEIN (INTERLEUKIN-22)  C 142 1147 0
4  Protein   PROTEIN (INTERLEUKIN-22)  D 142 1147 0
5  Protein   PROTEIN (INTERLEUKIN-22)  E 142 1147 0
6  Protein   PROTEIN (INTERLEUKIN-22)  F 142 1147 0
7  Ligand    G 3 0 38
8  Ligand    H 2 0 28
9  Ligand    I 5 0 60
10  Ligand    J 2 0 28
11  Ligand    K 2 0 28
12  Ligand    L 2 0 28
13  Ligand   PROTEIN (INTERLEUKIN-22)  A 1 0 14
14  Ligand   PROTEIN (INTERLEUKIN-22)  B 1 0 14
15  Ligand   PROTEIN (INTERLEUKIN-22)  E 1 0 14
16 Water     51 0 51
total       921 6876 303

Proteins
Unit 1 HIS39 CYS40 ARG41 LEU42 ASP43 LYS44 SER45 ASN46 PHE47 GLN48 GLN49 PRO50 TYR51 ILE52 THR53 ASN54 ARG55 THR56 PHE57 MET58 LEU59 ALA60 LYS61 GLU62 ALA63 SER64 LEU65 ALA66 ASP67 ASN68 ASN69 THR70 ASP71 VAL72 ARG73 LEU74 ILE75 GLY76 GLU77 LYS78 LEU79 PHE80 HIS81 GLY82 VAL83 SER84 MET85 SER86 GLU87 ARG88 CYS89 TYR90 LEU91 MET92 LYS93 GLN94 VAL95 LEU96 ASN97 PHE98 THR99 LEU100 GLU101 GLU102 VAL103 LEU104 PHE105 PRO106 GLN107 SER108 ASP109 ARG110 PHE111 GLN112 PRO113 TYR114 MET115 GLN116 GLU117 VAL118 VAL119 PRO120 PHE121 LEU122 ALA123 ARG124 LEU125 SER126 ASN127 ARG128 LEU129 SER130 THR131 CYS132 HIS133 ILE134 GLU135 GLY136 ASP137 ASP138 LEU139 HIS140 ILE141 GLN142 ARG143 ASN144 VAL145 GLN146 LYS147 LEU148 LYS149 ASP150 THR151 VAL152 LYS153 LYS154 LEU155 GLY156 GLU157 SER158 GLY159 GLU160 ILE161 LYS162 ALA163 ILE164 GLY165 GLU166 LEU167 ASP168 LEU169 LEU170 PHE171 MET172 SER173 LEU174 ARG175 ASN176 ALA177 CYS178 ILE179
Unit 2 SER38 HIS39 CYS40 ARG41 LEU42 ASP43 LYS44 SER45 ASN46 PHE47 GLN48 GLN49 PRO50 TYR51 ILE52 THR53 ASN54 ARG55 THR56 PHE57 MET58 LEU59 ALA60 LYS61 GLU62 ALA63 SER64 LEU65 ALA66 ASP67 ASN68 ASN69 THR70 ASP71 VAL72 ARG73 LEU74 ILE75 GLY76 GLU77 LYS78 LEU79 PHE80 HIS81 GLY82 VAL83 SER84 MET85 SER86 GLU87 ARG88 CYS89 TYR90 LEU91 MET92 LYS93 GLN94 VAL95 LEU96 ASN97 PHE98 THR99 LEU100 GLU101 GLU102 VAL103 LEU104 PHE105 PRO106 GLN107 SER108 ASP109 ARG110 PHE111 GLN112 PRO113 TYR114 MET115 GLN116 GLU117 VAL118 VAL119 PRO120 PHE121 LEU122 ALA123 ARG124 LEU125 SER126 ASN127 ARG128 LEU129 SER130 THR131 CYS132 HIS133 ILE134 GLU135 GLY136 ASP137 ASP138 LEU139 HIS140 ILE141 GLN142 ARG143 ASN144 VAL145 GLN146 LYS147 LEU148 LYS149 ASP150 THR151 VAL152 LYS153 LYS154 LEU155 GLY156 GLU157 SER158 GLY159 GLU160 ILE161 LYS162 ALA163 ILE164 GLY165 GLU166 LEU167 ASP168 LEU169 LEU170 PHE171 MET172 SER173 LEU174 ARG175 ASN176 ALA177 CYS178 ILE179
Unit 3 SER38 HIS39 CYS40 ARG41 LEU42 ASP43 LYS44 SER45 ASN46 PHE47 GLN48 GLN49 PRO50 TYR51 ILE52 THR53 ASN54 ARG55 THR56 PHE57 MET58 LEU59 ALA60 LYS61 GLU62 ALA63 SER64 LEU65 ALA66 ASP67 ASN68 ASN69 THR70 ASP71 VAL72 ARG73 LEU74 ILE75 GLY76 GLU77 LYS78 LEU79 PHE80 HIS81 GLY82 VAL83 SER84 MET85 SER86 GLU87 ARG88 CYS89 TYR90 LEU91 MET92 LYS93 GLN94 VAL95 LEU96 ASN97 PHE98 THR99 LEU100 GLU101 GLU102 VAL103 LEU104 PHE105 PRO106 GLN107 SER108 ASP109 ARG110 PHE111 GLN112 PRO113 TYR114 MET115 GLN116 GLU117 VAL118 VAL119 PRO120 PHE121 LEU122 ALA123 ARG124 LEU125 SER126 ASN127 ARG128 LEU129 SER130 THR131 CYS132 HIS133 ILE134 GLU135 GLY136 ASP137 ASP138 LEU139 HIS140 ILE141 GLN142 ARG143 ASN144 VAL145 GLN146 LYS147 LEU148 LYS149 ASP150 THR151 VAL152 LYS153 LYS154 LEU155 GLY156 GLU157 SER158 GLY159 GLU160 ILE161 LYS162 ALA163 ILE164 GLY165 GLU166 LEU167 ASP168 LEU169 LEU170 PHE171 MET172 SER173 LEU174 ARG175 ASN176 ALA177 CYS178 ILE179
Unit 4 SER38 HIS39 CYS40 ARG41 LEU42 ASP43 LYS44 SER45 ASN46 PHE47 GLN48 GLN49 PRO50 TYR51 ILE52 THR53 ASN54 ARG55 THR56 PHE57 MET58 LEU59 ALA60 LYS61 GLU62 ALA63 SER64 LEU65 ALA66 ASP67 ASN68 ASN69 THR70 ASP71 VAL72 ARG73 LEU74 ILE75 GLY76 GLU77 LYS78 LEU79 PHE80 HIS81 GLY82 VAL83 SER84 MET85 SER86 GLU87 ARG88 CYS89 TYR90 LEU91 MET92 LYS93 GLN94 VAL95 LEU96 ASN97 PHE98 THR99 LEU100 GLU101 GLU102 VAL103 LEU104 PHE105 PRO106 GLN107 SER108 ASP109 ARG110 PHE111 GLN112 PRO113 TYR114 MET115 GLN116 GLU117 VAL118 VAL119 PRO120 PHE121 LEU122 ALA123 ARG124 LEU125 SER126 ASN127 ARG128 LEU129 SER130 THR131 CYS132 HIS133 ILE134 GLU135 GLY136 ASP137 ASP138 LEU139 HIS140 ILE141 GLN142 ARG143 ASN144 VAL145 GLN146 LYS147 LEU148 LYS149 ASP150 THR151 VAL152 LYS153 LYS154 LEU155 GLY156 GLU157 SER158 GLY159 GLU160 ILE161 LYS162 ALA163 ILE164 GLY165 GLU166 LEU167 ASP168 LEU169 LEU170 PHE171 MET172 SER173 LEU174 ARG175 ASN176 ALA177 CYS178 ILE179
Unit 5 SER38 HIS39 CYS40 ARG41 LEU42 ASP43 LYS44 SER45 ASN46 PHE47 GLN48 GLN49 PRO50 TYR51 ILE52 THR53 ASN54 ARG55 THR56 PHE57 MET58 LEU59 ALA60 LYS61 GLU62 ALA63 SER64 LEU65 ALA66 ASP67 ASN68 ASN69 THR70 ASP71 VAL72 ARG73 LEU74 ILE75 GLY76 GLU77 LYS78 LEU79 PHE80 HIS81 GLY82 VAL83 SER84 MET85 SER86 GLU87 ARG88 CYS89 TYR90 LEU91 MET92 LYS93 GLN94 VAL95 LEU96 ASN97 PHE98 THR99 LEU100 GLU101 GLU102 VAL103 LEU104 PHE105 PRO106 GLN107 SER108 ASP109 ARG110 PHE111 GLN112 PRO113 TYR114 MET115 GLN116 GLU117 VAL118 VAL119 PRO120 PHE121 LEU122 ALA123 ARG124 LEU125 SER126 ASN127 ARG128 LEU129 SER130 THR131 CYS132 HIS133 ILE134 GLU135 GLY136 ASP137 ASP138 LEU139 HIS140 ILE141 GLN142 ARG143 ASN144 VAL145 GLN146 LYS147 LEU148 LYS149 ASP150 THR151 VAL152 LYS153 LYS154 LEU155 GLY156 GLU157 SER158 GLY159 GLU160 ILE161 LYS162 ALA163 ILE164 GLY165 GLU166 LEU167 ASP168 LEU169 LEU170 PHE171 MET172 SER173 LEU174 ARG175 ASN176 ALA177 CYS178 ILE179
Unit 6 SER38 HIS39 CYS40 ARG41 LEU42 ASP43 LYS44 SER45 ASN46 PHE47 GLN48 GLN49 PRO50 TYR51 ILE52 THR53 ASN54 ARG55 THR56 PHE57 MET58 LEU59 ALA60 LYS61 GLU62 ALA63 SER64 LEU65 ALA66 ASP67 ASN68 ASN69 THR70 ASP71 VAL72 ARG73 LEU74 ILE75 GLY76 GLU77 LYS78 LEU79 PHE80 HIS81 GLY82 VAL83 SER84 MET85 SER86 GLU87 ARG88 CYS89 TYR90 LEU91 MET92 LYS93 GLN94 VAL95 LEU96 ASN97 PHE98 THR99 LEU100 GLU101 GLU102 VAL103 LEU104 PHE105 PRO106 GLN107 SER108 ASP109 ARG110 PHE111 GLN112 PRO113 TYR114 MET115 GLN116 GLU117 VAL118 VAL119 PRO120 PHE121 LEU122 ALA123 ARG124 LEU125 SER126 ASN127 ARG128 LEU129 SER130 THR131 CYS132 HIS133 ILE134 GLU135 GLY136 ASP137 ASP138 LEU139 HIS140 ILE141 GLN142 ARG143 ASN144 VAL145 GLN146 LYS147 LEU148 LYS149 ASP150 THR151 VAL152 LYS153 LYS154 LEU155 GLY156 GLU157 SER158 GLY159 GLU160 ILE161 LYS162 ALA163 ILE164 GLY165 GLU166 LEU167 ASP168 LEU169 LEU170 PHE171 MET172 SER173 LEU174 ARG175 ASN176 ALA177 CYS178 ILE179

Ligands
Unit 7 NAG1 NAG2 FUC3
Unit 8 NAG1 NAG2
Unit 9 NAG1 NAG2 MAN3 MAN4 FUC5
Unit 10 NAG1 NAG2
Unit 11 NAG1 NAG2
Unit 12 NAG1 NAG2
Unit 13 NAG1131
Unit 14 NAG1231
Unit 15 NAG1531

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany