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Title | CRYSTAL STRUCTURE OF A NICOTINATE PHOSPHORIBOSYLTRANSFERASE | |
Keywords | STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, HYPOTHETI PROTEIN, NYSGXRC, T1804, PSI, NEW YORK SGX RESEARCH CENTER STRUCTURAL GENOMICS, TRANSFERASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1YIR | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | A | 390 | 3165 | 0 |
2 | Protein | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | B | 390 | 3165 | 0 |
3 | Protein | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | C | 390 | 3165 | 0 |
4 | Protein | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | D | 390 | 3165 | 0 |
5 | Ligand | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | A | 3 | 0 | 15 |
6 | Ligand | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | B | 3 | 0 | 15 |
7 | Ligand | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | C | 3 | 0 | 15 |
8 | Ligand | NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 | D | 3 | 0 | 15 |
9 | Water | 716 | 0 | 716 | ||
total | 2288 | 12660 | 776 |
Unit 1 | LEU3 ALA4 GLU5 SER6 ALA7 PHE8 SER9 GLU10 ARG11 ILE12 VAL13 GLN14 ASN15 LEU16 LEU17 ASP18 THR19 ASP20 PHE21 TYR22 LYS23 LEU24 THR25 MET26 MET27 GLN28 ALA29 VAL30 LEU31 HIS32 ASN33 TYR34 PRO35 ASN36 ALA37 GLU38 VAL39 GLU40 TRP41 GLU42 PHE43 ARG44 CYS45 ARG46 ASN47 GLN48 GLU49 ASP50 LEU51 ARG52 LEU53 TYR54 LEU55 PRO56 ALA57 ILE58 ARG59 GLU60 GLN61 LEU62 GLU63 TYR64 LEU65 ALA66 GLY67 LEU68 ALA69 ILE70 SER71 ASP72 GLU73 GLN74 LEU75 ALA76 PHE77 LEU78 GLU79 ARG80 ILE81 PRO82 PHE83 LEU84 ALA85 PRO86 ASP87 PHE88 ILE89 ARG90 PHE91 LEU92 GLY93 LEU94 PHE95 ARG96 PHE97 ASN98 PRO99 ARG100 TYR101 VAL102 GLN103 THR104 GLY105 ILE106 GLU107 ASN108 ASP109 GLU110 PHE111 PHE112 LEU113 ARG114 LEU115 LYS116 GLY117 PRO118 TRP119 LEU120 HIS121 VAL122 ILE123 LEU124 PHE125 GLU126 VAL127 PRO128 LEU129 LEU130 ALA131 MET132 ILE133 SER134 GLU135 VAL136 ARG137 ASN138 ARG139 ALA140 ARG141 TYR142 PRO143 ALA144 ALA145 THR146 VAL147 GLU148 GLN149 ALA150 ARG151 GLU152 ARG153 LEU154 GLN155 GLU156 LYS157 PHE158 ASP159 TRP160 LEU161 ARG162 ARG163 GLU164 ALA165 SER166 ALA167 GLU168 GLU169 LEU170 ALA171 GLY172 PHE173 LYS174 MET175 ALA176 ASP177 PHE178 GLY179 THR180 ARG181 ARG182 ARG183 PHE184 SER185 TYR186 ARG187 VAL188 HIS189 GLU190 ALA191 VAL192 VAL193 SER194 GLY195 LEU196 LYS197 GLU198 ASP199 PHE200 PRO201 GLY202 CYS203 PHE204 VAL205 GLY206 THR207 SER208 ASN209 VAL210 HIS211 LEU212 ALA213 ARG214 LYS215 LEU216 ASP217 LEU218 LYS219 PRO220 LEU221 GLY222 THR223 MET224 ALA225 HIS226 GLU227 TRP228 LEU229 MET230 ALA231 HIS232 GLN233 GLN234 LEU235 GLY236 PRO237 ARG238 LEU239 ILE240 ASP241 SER242 GLN243 SER244 ALA245 ALA246 LEU247 ASP248 CYS249 TRP250 VAL251 ARG252 GLU253 TYR254 ARG255 GLY256 LEU257 LEU258 GLY259 ILE260 ALA261 LEU262 THR263 ASP264 CYS265 ILE266 THR267 THR268 ASP269 ALA270 PHE271 LEU272 ARG273 ASP274 PHE275 ASP276 LEU277 TYR278 PHE279 ALA280 LYS281 LEU282 PHE283 ASP284 GLY285 LEU286 ARG287 HIS288 ASP289 SER290 GLY291 ASP292 PRO293 LEU294 LEU295 TRP296 ALA297 GLU298 LYS299 THR300 ILE301 ALA302 HIS303 TYR304 LEU305 LYS306 LEU307 GLY308 ILE309 ASP310 PRO311 LEU312 THR313 LYS314 THR315 LEU316 VAL317 PHE318 SER319 ASP320 GLY321 LEU322 ASP323 LEU324 PRO325 ARG326 ALA327 LEU328 LYS329 ILE330 TYR331 ARG332 ALA333 LEU334 GLN335 GLY336 ARG337 ILE338 ASN339 VAL340 SER341 PHE342 GLY343 ILE344 GLY345 THR346 HIS347 PHE348 THR349 CYS350 ASP351 LEU352 PRO353 GLY354 VAL355 GLU356 PRO357 MET358 ASN359 ILE360 VAL361 VAL362 LYS363 MET364 SER365 ALA366 CYS367 ASN368 GLY369 HIS370 PRO371 VAL372 ALA373 LYS374 ILE375 SER376 ASP377 THR378 PRO379 PRO387 ASP388 PHE389 ILE390 HIS391 TYR392 LEU393 LYS394 HIS395 VAL396 PHE397 GLN398 VAL399 |
Unit 2 | LEU3 ALA4 GLU5 SER6 ALA7 PHE8 SER9 GLU10 ARG11 ILE12 VAL13 GLN14 ASN15 LEU16 LEU17 ASP18 THR19 ASP20 PHE21 TYR22 LYS23 LEU24 THR25 MET26 MET27 GLN28 ALA29 VAL30 LEU31 HIS32 ASN33 TYR34 PRO35 ASN36 ALA37 GLU38 VAL39 GLU40 TRP41 GLU42 PHE43 ARG44 CYS45 ARG46 ASN47 GLN48 GLU49 ASP50 LEU51 ARG52 LEU53 TYR54 LEU55 PRO56 ALA57 ILE58 ARG59 GLU60 GLN61 LEU62 GLU63 TYR64 LEU65 ALA66 GLY67 LEU68 ALA69 ILE70 SER71 ASP72 GLU73 GLN74 LEU75 ALA76 PHE77 LEU78 GLU79 ARG80 ILE81 PRO82 PHE83 LEU84 ALA85 PRO86 ASP87 PHE88 ILE89 ARG90 PHE91 LEU92 GLY93 LEU94 PHE95 ARG96 PHE97 ASN98 PRO99 ARG100 TYR101 VAL102 GLN103 THR104 GLY105 ILE106 GLU107 ASN108 ASP109 GLU110 PHE111 PHE112 LEU113 ARG114 LEU115 LYS116 GLY117 PRO118 TRP119 LEU120 HIS121 VAL122 ILE123 LEU124 PHE125 GLU126 VAL127 PRO128 LEU129 LEU130 ALA131 MET132 ILE133 SER134 GLU135 VAL136 ARG137 ASN138 ARG139 ALA140 ARG141 TYR142 PRO143 ALA144 ALA145 THR146 VAL147 GLU148 GLN149 ALA150 ARG151 GLU152 ARG153 LEU154 GLN155 GLU156 LYS157 PHE158 ASP159 TRP160 LEU161 ARG162 ARG163 GLU164 ALA165 SER166 ALA167 GLU168 GLU169 LEU170 ALA171 GLY172 PHE173 LYS174 MET175 ALA176 ASP177 PHE178 GLY179 THR180 ARG181 ARG182 ARG183 PHE184 SER185 TYR186 ARG187 VAL188 HIS189 GLU190 ALA191 VAL192 VAL193 SER194 GLY195 LEU196 LYS197 GLU198 ASP199 PHE200 PRO201 GLY202 CYS203 PHE204 VAL205 GLY206 THR207 SER208 ASN209 VAL210 HIS211 LEU212 ALA213 ARG214 LYS215 LEU216 ASP217 LEU218 LYS219 PRO220 LEU221 GLY222 THR223 MET224 ALA225 HIS226 GLU227 TRP228 LEU229 MET230 ALA231 HIS232 GLN233 GLN234 LEU235 GLY236 PRO237 ARG238 LEU239 ILE240 ASP241 SER242 GLN243 SER244 ALA245 ALA246 LEU247 ASP248 CYS249 TRP250 VAL251 ARG252 GLU253 TYR254 ARG255 GLY256 LEU257 LEU258 GLY259 ILE260 ALA261 LEU262 THR263 ASP264 CYS265 ILE266 THR267 THR268 ASP269 ALA270 PHE271 LEU272 ARG273 ASP274 PHE275 ASP276 LEU277 TYR278 PHE279 ALA280 LYS281 LEU282 PHE283 ASP284 GLY285 LEU286 ARG287 HIS288 ASP289 SER290 GLY291 ASP292 PRO293 LEU294 LEU295 TRP296 ALA297 GLU298 LYS299 THR300 ILE301 ALA302 HIS303 TYR304 LEU305 LYS306 LEU307 GLY308 ILE309 ASP310 PRO311 LEU312 THR313 LYS314 THR315 LEU316 VAL317 PHE318 SER319 ASP320 GLY321 LEU322 ASP323 LEU324 PRO325 ARG326 ALA327 LEU328 LYS329 ILE330 TYR331 ARG332 ALA333 LEU334 GLN335 GLY336 ARG337 ILE338 ASN339 VAL340 SER341 PHE342 GLY343 ILE344 GLY345 THR346 HIS347 PHE348 THR349 CYS350 ASP351 LEU352 PRO353 GLY354 VAL355 GLU356 PRO357 MET358 ASN359 ILE360 VAL361 VAL362 LYS363 MET364 SER365 ALA366 CYS367 ASN368 GLY369 HIS370 PRO371 VAL372 ALA373 LYS374 ILE375 SER376 ASP377 THR378 PRO379 PRO387 ASP388 PHE389 ILE390 HIS391 TYR392 LEU393 LYS394 HIS395 VAL396 PHE397 GLN398 VAL399 |
Unit 3 | LEU3 ALA4 GLU5 SER6 ALA7 PHE8 SER9 GLU10 ARG11 ILE12 VAL13 GLN14 ASN15 LEU16 LEU17 ASP18 THR19 ASP20 PHE21 TYR22 LYS23 LEU24 THR25 MET26 MET27 GLN28 ALA29 VAL30 LEU31 HIS32 ASN33 TYR34 PRO35 ASN36 ALA37 GLU38 VAL39 GLU40 TRP41 GLU42 PHE43 ARG44 CYS45 ARG46 ASN47 GLN48 GLU49 ASP50 LEU51 ARG52 LEU53 TYR54 LEU55 PRO56 ALA57 ILE58 ARG59 GLU60 GLN61 LEU62 GLU63 TYR64 LEU65 ALA66 GLY67 LEU68 ALA69 ILE70 SER71 ASP72 GLU73 GLN74 LEU75 ALA76 PHE77 LEU78 GLU79 ARG80 ILE81 PRO82 PHE83 LEU84 ALA85 PRO86 ASP87 PHE88 ILE89 ARG90 PHE91 LEU92 GLY93 LEU94 PHE95 ARG96 PHE97 ASN98 PRO99 ARG100 TYR101 VAL102 GLN103 THR104 GLY105 ILE106 GLU107 ASN108 ASP109 GLU110 PHE111 PHE112 LEU113 ARG114 LEU115 LYS116 GLY117 PRO118 TRP119 LEU120 HIS121 VAL122 ILE123 LEU124 PHE125 GLU126 VAL127 PRO128 LEU129 LEU130 ALA131 MET132 ILE133 SER134 GLU135 VAL136 ARG137 ASN138 ARG139 ALA140 ARG141 TYR142 PRO143 ALA144 ALA145 THR146 VAL147 GLU148 GLN149 ALA150 ARG151 GLU152 ARG153 LEU154 GLN155 GLU156 LYS157 PHE158 ASP159 TRP160 LEU161 ARG162 ARG163 GLU164 ALA165 SER166 ALA167 GLU168 GLU169 LEU170 ALA171 GLY172 PHE173 LYS174 MET175 ALA176 ASP177 PHE178 GLY179 THR180 ARG181 ARG182 ARG183 PHE184 SER185 TYR186 ARG187 VAL188 HIS189 GLU190 ALA191 VAL192 VAL193 SER194 GLY195 LEU196 LYS197 GLU198 ASP199 PHE200 PRO201 GLY202 CYS203 PHE204 VAL205 GLY206 THR207 SER208 ASN209 VAL210 HIS211 LEU212 ALA213 ARG214 LYS215 LEU216 ASP217 LEU218 LYS219 PRO220 LEU221 GLY222 THR223 MET224 ALA225 HIS226 GLU227 TRP228 LEU229 MET230 ALA231 HIS232 GLN233 GLN234 LEU235 GLY236 PRO237 ARG238 LEU239 ILE240 ASP241 SER242 GLN243 SER244 ALA245 ALA246 LEU247 ASP248 CYS249 TRP250 VAL251 ARG252 GLU253 TYR254 ARG255 GLY256 LEU257 LEU258 GLY259 ILE260 ALA261 LEU262 THR263 ASP264 CYS265 ILE266 THR267 THR268 ASP269 ALA270 PHE271 LEU272 ARG273 ASP274 PHE275 ASP276 LEU277 TYR278 PHE279 ALA280 LYS281 LEU282 PHE283 ASP284 GLY285 LEU286 ARG287 HIS288 ASP289 SER290 GLY291 ASP292 PRO293 LEU294 LEU295 TRP296 ALA297 GLU298 LYS299 THR300 ILE301 ALA302 HIS303 TYR304 LEU305 LYS306 LEU307 GLY308 ILE309 ASP310 PRO311 LEU312 THR313 LYS314 THR315 LEU316 VAL317 PHE318 SER319 ASP320 GLY321 LEU322 ASP323 LEU324 PRO325 ARG326 ALA327 LEU328 LYS329 ILE330 TYR331 ARG332 ALA333 LEU334 GLN335 GLY336 ARG337 ILE338 ASN339 VAL340 SER341 PHE342 GLY343 ILE344 GLY345 THR346 HIS347 PHE348 THR349 CYS350 ASP351 LEU352 PRO353 GLY354 VAL355 GLU356 PRO357 MET358 ASN359 ILE360 VAL361 VAL362 LYS363 MET364 SER365 ALA366 CYS367 ASN368 GLY369 HIS370 PRO371 VAL372 ALA373 LYS374 ILE375 SER376 ASP377 THR378 PRO379 PRO387 ASP388 PHE389 ILE390 HIS391 TYR392 LEU393 LYS394 HIS395 VAL396 PHE397 GLN398 VAL399 |
Unit 4 | LEU3 ALA4 GLU5 SER6 ALA7 PHE8 SER9 GLU10 ARG11 ILE12 VAL13 GLN14 ASN15 LEU16 LEU17 ASP18 THR19 ASP20 PHE21 TYR22 LYS23 LEU24 THR25 MET26 MET27 GLN28 ALA29 VAL30 LEU31 HIS32 ASN33 TYR34 PRO35 ASN36 ALA37 GLU38 VAL39 GLU40 TRP41 GLU42 PHE43 ARG44 CYS45 ARG46 ASN47 GLN48 GLU49 ASP50 LEU51 ARG52 LEU53 TYR54 LEU55 PRO56 ALA57 ILE58 ARG59 GLU60 GLN61 LEU62 GLU63 TYR64 LEU65 ALA66 GLY67 LEU68 ALA69 ILE70 SER71 ASP72 GLU73 GLN74 LEU75 ALA76 PHE77 LEU78 GLU79 ARG80 ILE81 PRO82 PHE83 LEU84 ALA85 PRO86 ASP87 PHE88 ILE89 ARG90 PHE91 LEU92 GLY93 LEU94 PHE95 ARG96 PHE97 ASN98 PRO99 ARG100 TYR101 VAL102 GLN103 THR104 GLY105 ILE106 GLU107 ASN108 ASP109 GLU110 PHE111 PHE112 LEU113 ARG114 LEU115 LYS116 GLY117 PRO118 TRP119 LEU120 HIS121 VAL122 ILE123 LEU124 PHE125 GLU126 VAL127 PRO128 LEU129 LEU130 ALA131 MET132 ILE133 SER134 GLU135 VAL136 ARG137 ASN138 ARG139 ALA140 ARG141 TYR142 PRO143 ALA144 ALA145 THR146 VAL147 GLU148 GLN149 ALA150 ARG151 GLU152 ARG153 LEU154 GLN155 GLU156 LYS157 PHE158 ASP159 TRP160 LEU161 ARG162 ARG163 GLU164 ALA165 SER166 ALA167 GLU168 GLU169 LEU170 ALA171 GLY172 PHE173 LYS174 MET175 ALA176 ASP177 PHE178 GLY179 THR180 ARG181 ARG182 ARG183 PHE184 SER185 TYR186 ARG187 VAL188 HIS189 GLU190 ALA191 VAL192 VAL193 SER194 GLY195 LEU196 LYS197 GLU198 ASP199 PHE200 PRO201 GLY202 CYS203 PHE204 VAL205 GLY206 THR207 SER208 ASN209 VAL210 HIS211 LEU212 ALA213 ARG214 LYS215 LEU216 ASP217 LEU218 LYS219 PRO220 LEU221 GLY222 THR223 MET224 ALA225 HIS226 GLU227 TRP228 LEU229 MET230 ALA231 HIS232 GLN233 GLN234 LEU235 GLY236 PRO237 ARG238 LEU239 ILE240 ASP241 SER242 GLN243 SER244 ALA245 ALA246 LEU247 ASP248 CYS249 TRP250 VAL251 ARG252 GLU253 TYR254 ARG255 GLY256 LEU257 LEU258 GLY259 ILE260 ALA261 LEU262 THR263 ASP264 CYS265 ILE266 THR267 THR268 ASP269 ALA270 PHE271 LEU272 ARG273 ASP274 PHE275 ASP276 LEU277 TYR278 PHE279 ALA280 LYS281 LEU282 PHE283 ASP284 GLY285 LEU286 ARG287 HIS288 ASP289 SER290 GLY291 ASP292 PRO293 LEU294 LEU295 TRP296 ALA297 GLU298 LYS299 THR300 ILE301 ALA302 HIS303 TYR304 LEU305 LYS306 LEU307 GLY308 ILE309 ASP310 PRO311 LEU312 THR313 LYS314 THR315 LEU316 VAL317 PHE318 SER319 ASP320 GLY321 LEU322 ASP323 LEU324 PRO325 ARG326 ALA327 LEU328 LYS329 ILE330 TYR331 ARG332 ALA333 LEU334 GLN335 GLY336 ARG337 ILE338 ASN339 VAL340 SER341 PHE342 GLY343 ILE344 GLY345 THR346 HIS347 PHE348 THR349 CYS350 ASP351 LEU352 PRO353 GLY354 VAL355 GLU356 PRO357 MET358 ASN359 ILE360 VAL361 VAL362 LYS363 MET364 SER365 ALA366 CYS367 ASN368 GLY369 HIS370 PRO371 VAL372 ALA373 LYS374 ILE375 SER376 ASP377 THR378 PRO379 PRO387 ASP388 PHE389 ILE390 HIS391 TYR392 LEU393 LYS394 HIS395 VAL396 PHE397 GLN398 VAL399 |
Unit 5 | SO42000 SO42001 SO42002 |
Unit 6 | SO43000 SO43001 SO43002 |
Unit 7 | SO44001 SO44002 SO44003 |
Unit 8 | SO45000 SO45001 SO45002 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |