1YI8 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF TRYPTOPHANYL TRRNA SYNTHETASE II FROM D RADIODURANS IN COMPLEX WITH L-TRP
• Keywords: AUXILIARY TRYPTOPHANYL TRNA SYNTHETASE, LIGASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YI8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRYPTOPHANYL-TRNA SYNTHETASE	B	331	2544	0
2	Protein	TRYPTOPHANYL-TRNA SYNTHETASE	A	331	2511	0
3	Protein	TRYPTOPHANYL-TRNA SYNTHETASE	C	331	2532	0
4	Protein	TRYPTOPHANYL-TRNA SYNTHETASE	C	1	0	15
5	Water			1059	0	1059
total				2053	7587	1074

Proteins

Unit 1	ALA 21 ARG 22 PRO 23 ARG 24 VAL 25 LEU 26 THR 27 GLY 28 ASP 29 ARG 30 PRO 31 THR 32 GLY 33 ALA 34 LEU 35 HIS 36 LEU 37 GLY 38 HIS 39 LEU 40 ALA 41 GLY 42 SER 43 LEU 44 GLN 45 ASN 46 ARG 47 VAL 48 ARG 49 LEU 50 GLN 51 ASP 52 GLU 53 ALA 54 GLU 55 LEU 56 PHE 57 VAL 58 LEU 59 LEU 60 ALA 61 ASP 62 VAL 63 GLN 64 ALA 65 LEU 66 THR 67 ASP 68 HIS 69 PHE 70 ASP 71 ARG 72 PRO 73 GLU 74 GLN 75 VAL 76 ARG 77 GLU 78 ASN 79 VAL 80 LEU 81 ALA 82 VAL 83 ALA 84 LEU 85 ASP 86 TYR 87 LEU 88 ALA 89 ALA 90 GLY 91 LEU 92 ASP 93 PRO 94 GLN 95 LYS 96 THR 97 THR 98 CYS 99 VAL 100 VAL 101 GLN 102 SER 103 ALA 104 VAL 105 PRO 106 GLU 107 LEU 108 ALA 109 GLU 110 LEU 111 THR 112 VAL 113 TYR 114 PHE 115 LEU 116 ASN 117 LEU 118 VAL 119 THR 120 VAL 121 SER 122 HIS 123 LEU 124 ARG 125 GLN 126 ASN 127 PRO 128 THR 129 VAL 130 LYS 131 ALA 132 GLU 133 ILE 134 ALA 135 GLN 136 LYS 137 GLY 138 TYR 139 GLY 140 GLU 141 ARG 142 VAL 143 PRO 144 ALA 145 GLY 146 PHE 147 PHE 148 VAL 149 TYR 150 PRO 151 VAL 152 SER 153 GLN 154 ALA 155 ALA 156 ASP 157 ILE 158 ALA 159 ALA 160 PHE 161 GLY 162 ALA 163 THR 164 LEU 165 VAL 166 PRO 167 VAL 168 GLY 169 ASP 170 ASP 171 GLN 172 LEU 173 PRO 174 MET 175 LEU 176 GLU 177 GLN 178 THR 179 ARG 180 GLU 181 ILE 182 VAL 183 ARG 184 ARG 185 PHE 186 ASN 187 ALA 188 LEU 189 TYR 190 ALA 191 PRO 192 VAL 193 LEU 194 ALA 195 GLU 196 PRO 197 GLN 198 ALA 199 GLN 200 LEU 201 SER 202 ARG 203 VAL 204 PRO 205 ARG 206 LEU 207 PRO 208 GLY 209 LEU 210 ASP 211 GLY 212 GLN 213 ALA 214 LYS 215 MET 216 SER 217 LYS 218 SER 219 LEU 220 GLY 221 ASN 222 ALA 223 ILE 224 ALA 225 LEU 226 GLY 227 ASP 228 SER 229 ALA 230 ASP 231 GLU 232 VAL 233 ALA 234 ARG 235 LYS 236 VAL 237 MET 238 GLY 239 MET 240 TYR 241 THR 242 ASP 243 PRO 244 GLY 245 HIS 246 LEU 247 ARG 248 ALA 249 SER 250 ASP 251 PRO 252 GLY 253 ARG 254 VAL 255 GLU 256 GLY 257 ASN 258 PRO 259 VAL 260 PHE 261 THR 262 PHE 263 LEU 264 ASP 265 ALA 266 PHE 267 ASP 268 PRO 269 ASP 270 PRO 271 ALA 272 ARG 273 VAL 274 GLN 275 ALA 276 LEU 277 LYS 278 ASP 279 GLN 280 TYR 281 ARG 282 ALA 283 GLY 284 GLY 285 LEU 286 GLY 287 ASP 288 VAL 289 LYS 290 VAL 291 LYS 292 LYS 293 HIS 294 LEU 295 ILE 296 ASP 297 VAL 298 LEU 299 ASN 300 GLY 301 VAL 302 LEU 303 ALA 304 PRO 305 ILE 306 ARG 307 THR 308 ARG 309 ARG 310 ALA 311 GLU 312 TYR 313 GLU 314 ARG 315 ASP 316 PRO 317 ASP 318 ALA 319 VAL 320 LEU 321 ARG 322 PHE 323 VAL 324 THR 325 GLU 326 GLY 327 THR 328 ALA 329 ARG 330 GLY 331 ARG 332 GLU 333 VAL 334 ALA 335 ALA 336 GLN 337 THR 338 LEU 339 GLY 340 GLN 341 VAL 342 ARG 343 ARG 344 ALA 345 MET 346 ARG 347 LEU 348 PHE 349 GLY 350 HIS 351
Unit 2	ALA 21 ARG 22 PRO 23 ARG 24 VAL 25 LEU 26 THR 27 GLY 28 ASP 29 ARG 30 PRO 31 THR 32 GLY 33 ALA 34 LEU 35 HIS 36 LEU 37 GLY 38 HIS 39 LEU 40 ALA 41 GLY 42 SER 43 LEU 44 GLN 45 ASN 46 ARG 47 VAL 48 ARG 49 LEU 50 GLN 51 ASP 52 GLU 53 ALA 54 GLU 55 LEU 56 PHE 57 VAL 58 LEU 59 LEU 60 ALA 61 ASP 62 VAL 63 GLN 64 ALA 65 LEU 66 THR 67 ASP 68 HIS 69 PHE 70 ASP 71 ARG 72 PRO 73 GLU 74 GLN 75 VAL 76 ARG 77 GLU 78 ASN 79 VAL 80 LEU 81 ALA 82 VAL 83 ALA 84 LEU 85 ASP 86 TYR 87 LEU 88 ALA 89 ALA 90 GLY 91 LEU 92 ASP 93 PRO 94 GLN 95 LYS 96 THR 97 THR 98 CYS 99 VAL 100 VAL 101 GLN 102 SER 103 ALA 104 VAL 105 PRO 106 GLU 107 LEU 108 ALA 109 GLU 110 LEU 111 THR 112 VAL 113 TYR 114 PHE 115 LEU 116 ASN 117 LEU 118 VAL 119 THR 120 VAL 121 SER 122 HIS 123 LEU 124 ARG 125 GLN 126 ASN 127 PRO 128 THR 129 VAL 130 LYS 131 ALA 132 GLU 133 ILE 134 ALA 135 GLN 136 LYS 137 GLY 138 TYR 139 GLY 140 GLU 141 ARG 142 VAL 143 PRO 144 ALA 145 GLY 146 PHE 147 PHE 148 VAL 149 TYR 150 PRO 151 VAL 152 SER 153 GLN 154 ALA 155 ALA 156 ASP 157 ILE 158 ALA 159 ALA 160 PHE 161 GLY 162 ALA 163 THR 164 LEU 165 VAL 166 PRO 167 VAL 168 GLY 169 ASP 170 ASP 171 GLN 172 LEU 173 PRO 174 MET 175 LEU 176 GLU 177 GLN 178 THR 179 ARG 180 GLU 181 ILE 182 VAL 183 ARG 184 ARG 185 PHE 186 ASN 187 ALA 188 LEU 189 TYR 190 ALA 191 PRO 192 VAL 193 LEU 194 ALA 195 GLU 196 PRO 197 GLN 198 ALA 199 GLN 200 LEU 201 SER 202 ARG 203 VAL 204 PRO 205 ARG 206 LEU 207 PRO 208 GLY 209 LEU 210 ASP 211 GLY 212 GLN 213 ALA 214 LYS 215 MET 216 SER 217 LYS 218 SER 219 LEU 220 GLY 221 ASN 222 ALA 223 ILE 224 ALA 225 LEU 226 GLY 227 ASP 228 SER 229 ALA 230 ASP 231 GLU 232 VAL 233 ALA 234 ARG 235 LYS 236 VAL 237 MET 238 GLY 239 MET 240 TYR 241 THR 242 ASP 243 PRO 244 GLY 245 HIS 246 LEU 247 ARG 248 ALA 249 SER 250 ASP 251 PRO 252 GLY 253 ARG 254 VAL 255 GLU 256 GLY 257 ASN 258 PRO 259 VAL 260 PHE 261 THR 262 PHE 263 LEU 264 ASP 265 ALA 266 PHE 267 ASP 268 PRO 269 ASP 270 PRO 271 ALA 272 ARG 273 VAL 274 GLN 275 ALA 276 LEU 277 LYS 278 ASP 279 GLN 280 TYR 281 ARG 282 ALA 283 GLY 284 GLY 285 LEU 286 GLY 287 ASP 288 VAL 289 LYS 290 VAL 291 LYS 292 LYS 293 HIS 294 LEU 295 ILE 296 ASP 297 VAL 298 LEU 299 ASN 300 GLY 301 VAL 302 LEU 303 ALA 304 PRO 305 ILE 306 ARG 307 THR 308 ARG 309 ARG 310 ALA 311 GLU 312 TYR 313 GLU 314 ARG 315 ASP 316 PRO 317 ASP 318 ALA 319 VAL 320 LEU 321 ARG 322 PHE 323 VAL 324 THR 325 GLU 326 GLY 327 THR 328 ALA 329 ARG 330 GLY 331 ARG 332 GLU 333 VAL 334 ALA 335 ALA 336 GLN 337 THR 338 LEU 339 GLY 340 GLN 341 VAL 342 ARG 343 ARG 344 ALA 345 MET 346 ARG 347 LEU 348 PHE 349 GLY 350 HIS 351
Unit 3	ALA 21 ARG 22 PRO 23 ARG 24 VAL 25 LEU 26 THR 27 GLY 28 ASP 29 ARG 30 PRO 31 THR 32 GLY 33 ALA 34 LEU 35 HIS 36 LEU 37 GLY 38 HIS 39 LEU 40 ALA 41 GLY 42 SER 43 LEU 44 GLN 45 ASN 46 ARG 47 VAL 48 ARG 49 LEU 50 GLN 51 ASP 52 GLU 53 ALA 54 GLU 55 LEU 56 PHE 57 VAL 58 LEU 59 LEU 60 ALA 61 ASP 62 VAL 63 GLN 64 ALA 65 LEU 66 THR 67 ASP 68 HIS 69 PHE 70 ASP 71 ARG 72 PRO 73 GLU 74 GLN 75 VAL 76 ARG 77 GLU 78 ASN 79 VAL 80 LEU 81 ALA 82 VAL 83 ALA 84 LEU 85 ASP 86 TYR 87 LEU 88 ALA 89 ALA 90 GLY 91 LEU 92 ASP 93 PRO 94 GLN 95 LYS 96 THR 97 THR 98 CYS 99 VAL 100 VAL 101 GLN 102 SER 103 ALA 104 VAL 105 PRO 106 GLU 107 LEU 108 ALA 109 GLU 110 LEU 111 THR 112 VAL 113 TYR 114 PHE 115 LEU 116 ASN 117 LEU 118 VAL 119 THR 120 VAL 121 SER 122 HIS 123 LEU 124 ARG 125 GLN 126 ASN 127 PRO 128 THR 129 VAL 130 LYS 131 ALA 132 GLU 133 ILE 134 ALA 135 GLN 136 LYS 137 GLY 138 TYR 139 GLY 140 GLU 141 ARG 142 VAL 143 PRO 144 ALA 145 GLY 146 PHE 147 PHE 148 VAL 149 TYR 150 PRO 151 VAL 152 SER 153 GLN 154 ALA 155 ALA 156 ASP 157 ILE 158 ALA 159 ALA 160 PHE 161 GLY 162 ALA 163 THR 164 LEU 165 VAL 166 PRO 167 VAL 168 GLY 169 ASP 170 ASP 171 GLN 172 LEU 173 PRO 174 MET 175 LEU 176 GLU 177 GLN 178 THR 179 ARG 180 GLU 181 ILE 182 VAL 183 ARG 184 ARG 185 PHE 186 ASN 187 ALA 188 LEU 189 TYR 190 ALA 191 PRO 192 VAL 193 LEU 194 ALA 195 GLU 196 PRO 197 GLN 198 ALA 199 GLN 200 LEU 201 SER 202 ARG 203 VAL 204 PRO 205 ARG 206 LEU 207 PRO 208 GLY 209 LEU 210 ASP 211 GLY 212 GLN 213 ALA 214 LYS 215 MET 216 SER 217 LYS 218 SER 219 LEU 220 GLY 221 ASN 222 ALA 223 ILE 224 ALA 225 LEU 226 GLY 227 ASP 228 SER 229 ALA 230 ASP 231 GLU 232 VAL 233 ALA 234 ARG 235 LYS 236 VAL 237 MET 238 GLY 239 MET 240 TYR 241 THR 242 ASP 243 PRO 244 GLY 245 HIS 246 LEU 247 ARG 248 ALA 249 SER 250 ASP 251 PRO 252 GLY 253 ARG 254 VAL 255 GLU 256 GLY 257 ASN 258 PRO 259 VAL 260 PHE 261 THR 262 PHE 263 LEU 264 ASP 265 ALA 266 PHE 267 ASP 268 PRO 269 ASP 270 PRO 271 ALA 272 ARG 273 VAL 274 GLN 275 ALA 276 LEU 277 LYS 278 ASP 279 GLN 280 TYR 281 ARG 282 ALA 283 GLY 284 GLY 285 LEU 286 GLY 287 ASP 288 VAL 289 LYS 290 VAL 291 LYS 292 LYS 293 HIS 294 LEU 295 ILE 296 ASP 297 VAL 298 LEU 299 ASN 300 GLY 301 VAL 302 LEU 303 ALA 304 PRO 305 ILE 306 ARG 307 THR 308 ARG 309 ARG 310 ALA 311 GLU 312 TYR 313 GLU 314 ARG 315 ASP 316 PRO 317 ASP 318 ALA 319 VAL 320 LEU 321 ARG 322 PHE 323 VAL 324 THR 325 GLU 326 GLY 327 THR 328 ALA 329 ARG 330 GLY 331 ARG 332 GLU 333 VAL 334 ALA 335 ALA 336 GLN 337 THR 338 LEU 339 GLY 340 GLN 341 VAL 342 ARG 343 ARG 344 ALA 345 MET 346 ARG 347 LEU 348 PHE 349 GLY 350 HIS 351
Unit 4	TRP 3000