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Title | CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE MSPI IN COMPLEX WITH ITS COGNATE DNA IN P212121 SPACE GROUP | |
Keywords | PROTEIN-DNA COMPLEX, HYDROLASE/DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1YFI | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | 5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3' | C | 9 | 180 | 0 |
2 | Other macromolecule | 5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3' | D | 9 | 183 | 0 |
3 | Other macromolecule | 5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3' | E | 10 | 202 | 0 |
4 | Other macromolecule | 5'-D(*CP*CP*CP*CP*CP*GP*GP*GP*GP*G)-3' | F | 10 | 202 | 0 |
5 | Protein | TYPE II RESTRICTION ENZYME MSPI | A | 262 | 2103 | 0 |
6 | Protein | TYPE II RESTRICTION ENZYME MSPI | B | 262 | 2103 | 0 |
7 | Water | 53 | 0 | 53 | ||
total | 615 | 4973 | 53 |
Unit 5 | MET1 ARG2 THR3 GLU4 LEU5 LEU6 SER7 LYS8 LEU9 TYR10 ASP11 ASP12 PHE13 GLY14 ILE15 ASP16 GLN17 LEU18 PRO19 HIS20 THR21 GLN22 HIS23 GLY24 VAL25 THR26 SER27 ASP28 ARG29 LEU30 GLY31 LYS32 LEU33 TYR34 GLU35 LYS36 TYR37 ILE38 LEU39 ASP40 ILE41 PHE42 LYS43 ASP44 ILE45 GLU46 SER47 LEU48 LYS49 LYS50 TYR51 ASN52 THR53 ASN54 ALA55 PHE56 PRO57 GLN58 GLU59 LYS60 ASP61 ILE62 SER63 SER64 LYS65 LEU66 LEU67 LYS68 ALA69 LEU70 ASN71 LEU72 ASP73 LEU74 ASP75 ASN76 ILE77 ILE78 ASP79 VAL80 SER81 SER82 SER83 ASP84 THR85 ASP86 LEU87 GLY88 ARG89 THR90 ILE91 ALA92 GLY93 GLY94 SER95 PRO96 LYS97 THR98 ASP99 ALA100 THR101 ILE102 ARG103 PHE104 THR105 PHE106 HIS107 ASN108 GLN109 SER110 SER111 ARG112 LEU113 VAL114 PRO115 LEU116 ASN117 ILE118 LYS119 HIS120 SER121 SER122 LYS123 LYS124 LYS125 VAL126 SER127 ILE128 ALA129 GLU130 TYR131 ASP132 VAL133 GLU134 THR135 ILE136 CYS137 THR138 GLY139 VAL140 GLY141 ILE142 SER143 ASP144 GLY145 GLU146 LEU147 LYS148 GLU149 LEU150 ILE151 ARG152 LYS153 HIS154 GLN155 ASN156 ASP157 GLN158 SER159 ALA160 LYS161 LEU162 PHE163 THR164 PRO165 VAL166 GLN167 LYS168 GLN169 ARG170 LEU171 THR172 GLU173 LEU174 LEU175 GLU176 PRO177 TYR178 ARG179 GLU180 ARG181 PHE182 ILE183 ARG184 TRP185 CYS186 VAL187 THR188 LEU189 ARG190 ALA191 GLU192 LYS193 SER194 GLU195 GLY196 ASN197 ILE198 LEU199 HIS200 PRO201 ASP202 LEU203 LEU204 ILE205 ARG206 PHE207 GLN208 VAL209 ILE210 ASP211 ARG212 GLU213 TYR214 VAL215 ASP216 VAL217 THR218 ILE219 LYS220 ASN221 ILE222 ASP223 ASP224 TYR225 VAL226 SER227 ASP228 ARG229 ILE230 ALA231 GLU232 GLY233 SER234 LYS235 ALA236 ARG237 LYS238 PRO239 GLY240 PHE241 GLY242 THR243 GLY244 LEU245 ASN246 TRP247 THR248 TYR249 ALA250 SER251 GLY252 SER253 LYS254 ALA255 LYS256 LYS257 MET258 GLN259 PHE260 LYS261 GLY262 |
Unit 6 | MET1 ARG2 THR3 GLU4 LEU5 LEU6 SER7 LYS8 LEU9 TYR10 ASP11 ASP12 PHE13 GLY14 ILE15 ASP16 GLN17 LEU18 PRO19 HIS20 THR21 GLN22 HIS23 GLY24 VAL25 THR26 SER27 ASP28 ARG29 LEU30 GLY31 LYS32 LEU33 TYR34 GLU35 LYS36 TYR37 ILE38 LEU39 ASP40 ILE41 PHE42 LYS43 ASP44 ILE45 GLU46 SER47 LEU48 LYS49 LYS50 TYR51 ASN52 THR53 ASN54 ALA55 PHE56 PRO57 GLN58 GLU59 LYS60 ASP61 ILE62 SER63 SER64 LYS65 LEU66 LEU67 LYS68 ALA69 LEU70 ASN71 LEU72 ASP73 LEU74 ASP75 ASN76 ILE77 ILE78 ASP79 VAL80 SER81 SER82 SER83 ASP84 THR85 ASP86 LEU87 GLY88 ARG89 THR90 ILE91 ALA92 GLY93 GLY94 SER95 PRO96 LYS97 THR98 ASP99 ALA100 THR101 ILE102 ARG103 PHE104 THR105 PHE106 HIS107 ASN108 GLN109 SER110 SER111 ARG112 LEU113 VAL114 PRO115 LEU116 ASN117 ILE118 LYS119 HIS120 SER121 SER122 LYS123 LYS124 LYS125 VAL126 SER127 ILE128 ALA129 GLU130 TYR131 ASP132 VAL133 GLU134 THR135 ILE136 CYS137 THR138 GLY139 VAL140 GLY141 ILE142 SER143 ASP144 GLY145 GLU146 LEU147 LYS148 GLU149 LEU150 ILE151 ARG152 LYS153 HIS154 GLN155 ASN156 ASP157 GLN158 SER159 ALA160 LYS161 LEU162 PHE163 THR164 PRO165 VAL166 GLN167 LYS168 GLN169 ARG170 LEU171 THR172 GLU173 LEU174 LEU175 GLU176 PRO177 TYR178 ARG179 GLU180 ARG181 PHE182 ILE183 ARG184 TRP185 CYS186 VAL187 THR188 LEU189 ARG190 ALA191 GLU192 LYS193 SER194 GLU195 GLY196 ASN197 ILE198 LEU199 HIS200 PRO201 ASP202 LEU203 LEU204 ILE205 ARG206 PHE207 GLN208 VAL209 ILE210 ASP211 ARG212 GLU213 TYR214 VAL215 ASP216 VAL217 THR218 ILE219 LYS220 ASN221 ILE222 ASP223 ASP224 TYR225 VAL226 SER227 ASP228 ARG229 ILE230 ALA231 GLU232 GLY233 SER234 LYS235 ALA236 ARG237 LYS238 PRO239 GLY240 PHE241 GLY242 THR243 GLY244 LEU245 ASN246 TRP247 THR248 TYR249 ALA250 SER251 GLY252 SER253 LYS254 ALA255 LYS256 LYS257 MET258 GLN259 PHE260 LYS261 GLY262 |
Unit 1 | DC1 DC2 DC3 DC4 DC5 DG6 DG7 DG8 DG9 |
Unit 2 | DC12 DC13 DC14 DC15 DG16 DG17 DG18 DG19 DG20 |
Unit 3 | DC1 DC2 DC3 DC4 DC5 DG6 DG7 DG8 DG9 DG10 |
Unit 4 | DC11 DC12 DC13 DC14 DC15 DG16 DG17 DG18 DG19 DG20 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |