1YF3 - Sequence, Chains, Asymmetric and Biological Units

• Title: T4DAM IN COMPLEX WITH ADOHCY AND 13-MER OLIGONUCLEOTIDE MAKI AND SEMI-SPECIFIC (~1/4) CONTACT
• Keywords: T4DAM, METHYLTRANSFERASE, DNA, TRANSFERASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YF3	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Other macromolecule	5'-D(*AP*CP*CP*AP*TP*GP*AP*TP*CP*TP*GP*AP*C)-3'	C	13	243	0
2	Other macromolecule	5'-D(*TP*GP*TP*CP*AP*GP*AP*TP*CP*AP*TP*GP*G)-3'	D	13	266	0
3	Protein	DNA ADENINE METHYLASE	A	259	2042	0
4	Protein	DNA ADENINE METHYLASE	B	249	1985	0
5	Ligand	DNA ADENINE METHYLASE	A	2	0	32
6	Ligand	DNA ADENINE METHYLASE	B	2	0	32
7	Water			204	0	204
total				742	4536	268

Proteins

Unit 3

MET 1 LEU 2 GLY 3 ALA 4 ILE 5 ALA 6 TYR 7 THR 8 GLY 9 ASN 10 LYS 11 GLN 12 SER 13 LEU 14 LEU 15 PRO 16 GLU 17 LEU 18 LYS 19 SER 20 HIS 21 PHE 22 PRO 23 LYS 24 TYR 25 ASN 26 ARG 27 PHE 28 VAL 29 ASP 30 LEU 31 PHE 32 CYS 33 GLY 34 GLY 35 LEU 36 SER 37 VAL 38 SER 39 LEU 40 ASN 41 VAL 42 ASN 43 GLY 44 PRO 45 VAL 46 LEU 47 ALA 48 ASN 49 ASP 50 ILE 51 GLN 52 GLU 53 PRO 54 ILE 55 ILE 56 GLU 57 MET 58 TYR 59 LYS 60 ARG 61 LEU 62 ILE 63 ASN 64 VAL 65 SER 66 TRP 67 ASP 68 ASP 69 VAL 70 LEU 71 LYS 72 VAL 73 ILE 74 LYS 75 GLN 76 TYR 77 LYS 78 LEU 79 SER 80 LYS 81 THR 82 SER 83 LYS 84 GLU 85 GLU 86 PHE 87 LEU 88 LYS 89 LEU 90 ARG 91 GLU 92 ASP 93 TYR 94 ASN 95 LYS 96 THR 97 ARG 98 ASP 99 PRO 100 LEU 101 LEU 102 LEU 103 TYR 104 VAL 105 LEU 106 HIS 107 PHE 108 HIS 109 GLY 110 PHE 111 SER 112 ASN 113 MET 114 ILE 115 ARG 116 ILE 117 ASN 118 TYR 119 LYS 120 GLY 121 ASN 122 PHE 123 THR 124 THR 125 PRO 126 PHE 127 GLY 128 LYS 129 ARG 130 THR 131 ILE 132 ASN 133 LYS 134 ASN 135 SER 136 GLU 137 LYS 138 ARG 139 PHE 140 ASN 141 HIS 142 PHE 143 LYS 144 GLN 145 ASN 146 CYS 147 ASP 148 LYS 149 ILE 150 ILE 151 PHE 152 SER 153 SER 154 LEU 155 HIS 156 PHE 157 LYS 158 ASP 159 VAL 160 LYS 161 ILE 162 LEU 163 ASP 164 GLY 165 ASP 166 PHE 167 VAL 168 TYR 169 VAL 170 ASP 171 PRO 172 PRO 173 TYR 174 LEU 175 ILE 176 THR 177 VAL 178 ALA 179 ASP 180 TYR 181 ASN 182 LYS 183 PHE 184 TRP 185 SER 186 GLU 187 ASP 188 GLU 189 GLU 190 LYS 191 ASP 192 LEU 193 LEU 194 ASN 195 LEU 196 LEU 197 ASP 198 SER 199 LEU 200 ASN 201 ASP 202 ARG 203 GLY 204 ILE 205 LYS 206 PHE 207 GLY 208 LEU 209 SER 210 ASN 211 VAL 212 LEU 213 GLU 214 HIS 215 HIS 216 GLY 217 LYS 218 GLU 219 ASN 220 THR 221 LEU 222 LEU 223 LYS 224 GLU 225 TRP 226 SER 227 LYS 228 LYS 229 TYR 230 ASN 231 VAL 232 LYS 233 HIS 234 LEU 235 ASN 236 LYS 237 LYS 238 TYR 239 VAL 240 PHE 241 ASN 242 ILE 243 TYR 244 HIS 245 SER 246 LYS 247 GLU 248 LYS 249 ASN 250 GLY 251 THR 252 ASP 253 GLU 254 VAL 255 TYR 256 ILE 257 PHE 258 ASN 259

Unit 4

MET 1 LEU 2 GLY 3 ALA 4 ILE 5 ALA 6 TYR 7 THR 8 GLY 9 ASN 10 LYS 11 GLN 12 SER 13 LEU 14 LEU 15 PRO 16 GLU 17 LEU 18 LYS 19 SER 20 HIS 21 PHE 22 PRO 23 LYS 24 TYR 25 ASN 26 ARG 27 PHE 28 VAL 29 ASP 30 LEU 31 PHE 32 CYS 33 GLY 34 GLY 35 LEU 36 SER 37 VAL 38 SER 39 LEU 40 ASN 41 VAL 42 ASN 43 GLY 44 PRO 45 VAL 46 LEU 47 ALA 48 ASN 49 ASP 50 ILE 51 GLN 52 GLU 53 PRO 54 ILE 55 ILE 56 GLU 57 MET 58 TYR 59 LYS 60 ARG 61 LEU 62 ILE 63 ASN 64 VAL 65 SER 66 TRP 67 ASP 68 ASP 69 VAL 70 LEU 71 LYS 72 VAL 73 ILE 74 LYS 75 GLN 76 TYR 77 LYS 78 LEU 79 SER 80 LYS 81 THR 82 SER 83 LYS 84 GLU 85 GLU 86 PHE 87 LEU 88 LYS 89 LEU 90 ARG 91 GLU 92 ASP 93 TYR 94 ASN 95 LYS 96 THR 97 ARG 98 ASP 99 PRO 100 LEU 101 LEU 102 LEU 103 TYR 104 VAL 105 LEU 106 HIS 107 PHE 108 HIS 109 GLY 110 PHE 111 SER 112 ASN 113 MET 114 ILE 115 ARG 116 ILE 117 ASN 118 TYR 119 LYS 120 GLY 121 ASN 122 PHE 123 THR 124 THR 125 PRO 126 PHE 127 GLY 128 LYS 129 ARG 130 THR 131 ILE 132 ASN 133 LYS 134 ASN 135 SER 136 GLU 137 LYS 138 ARG 139 PHE 140 ASN 141 HIS 142 PHE 143 LYS 144 GLN 145 ASN 146 CYS 147 ASP 148 LYS 149 ILE 150 ILE 151 PHE 152 SER 153 SER 154 LEU 155 HIS 156 PHE 157 LYS 158 ASP 159 VAL 160 LYS 161 ILE 162 LEU 163 ASP 164 GLY 165 ASP 166 PHE 167 VAL 168 TYR 169 VAL 170 ASP 171 PRO 172 PRO 173 TYR 174 LEU 175 ILE 176 THR 177 VAL 178 ALA 179 ASP 180 TYR 181 ASN 182 LYS 183 PHE 184 TRP 185 SER 186 GLU 187 ASP 188 GLU 189 GLU 190 LYS 191 ASP 192 LEU 193 LEU 194 ASN 195 LEU 196 LEU 197 ASP 198 SER 199 LEU 200 ASN 201 ASP 202 ARG 203 GLY 204 ILE 205 LYS 206 PHE 207 GLY 208 LEU 209 SER 210 ASN 211 VAL 212 LEU 213 GLU 214 HIS 215 HIS 216 GLY 217 LYS 218 GLU 219 ASN 220 THR 221 LEU 222 LEU 223 LYS 224 GLU 225 TRP 226 SER 227 LYS 228 LYS 229 TYR 230 ASN 231 VAL 232 LYS 233 HIS 234 LEU 235 ASN 236 LYS 237 LYS 238 LYS 249 ASN 250 GLY 251 THR 252 ASP 253 GLU 254 VAL 255 TYR 256 ILE 257 PHE 258 ASN 259

Other macromolecules

Unit 1	DA 400 DC 401 DC 402 DA 403 DT 404 DG 405 DA 406 DT 407 DC 408 DT 409 DG 410 DA 411 DC 412
Unit 2	DT 422 DG 423 DT 424 DC 425 DA 426 DG 427 DA 428 DT 429 DC 430 DA 431 DT 432 DG 433 DG 434

Ligands

Unit 5	SAH 400 GOL 498
Unit 6	SAH 401 GOL 497