1YEK - Sequence, Chains, Asymmetric and Biological Units

• Title: CATALYTIC ANTIBODY D2.3 COMPLEX
• Keywords: ABZYME, REACTION PRODUCT, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YEK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROTEIN (IG ANTIBODY D2.3 (LIGHT CHAIN))	L	219	1687	0
2	Protein	PROTEIN (IG ANTIBODY D2.3 (HEAVY CHAIN))	H	222	1702	0
3	Ligand	PROTEIN (IG ANTIBODY D2.3 (LIGHT CHAIN))	L	7	0	7
4	Ligand	PROTEIN (IG ANTIBODY D2.3 (HEAVY CHAIN))	H	1	0	10
5	Water			133	0	133
total				582	3389	150

Proteins

Unit 1

ASP 1 ILE 2 VAL 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 LEU 9 THR 10 LEU 11 SER 12 VAL 13 THR 14 ILE 15 GLY 16 GLN 17 PRO 18 ALA 19 SER 20 ILE 21 SER 22 CYS 23 LYS 24 SER 25 SER 26 GLN 27 SER 27A LEU 27B LEU 27C TYR 27D SER 27E ASN 28 GLY 29 LYS 30 THR 31 TYR 32 LEU 33 ASN 34 TRP 35 LEU 36 LEU 37 GLN 38 ARG 39 PRO 40 GLY 41 GLN 42 SER 43 PRO 44 LYS 45 ARG 46 LEU 47 ILE 48 HIS 49 LEU 50 VAL 51 SER 52 LYS 53 LEU 54 ASP 55 SER 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 ILE 62 THR 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 LYS 74 ILE 75 SER 76 ARG 77 VAL 78 GLU 79 ALA 80 ALA 81 ASP 82 LEU 83 GLY 84 VAL 85 TYR 86 TYR 87 CYS 88 VAL 89 GLN 90 GLY 91 THR 92 HIS 93 PHE 94 PRO 95 TYR 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LEU 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 ASN 212 GLU 213 CYS 214

Unit 2

GLU 1 MET 2 GLN 3 LEU 4 GLN 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 LEU 11 LEU 12 ARG 13 PRO 14 GLY 15 THR 16 SER 17 VAL 18 LYS 19 LEU 20 SER 21 CYS 22 LYS 23 THR 24 SER 25 GLY 26 TYR 27 ILE 28 PHE 29 THR 30 SER 31 TYR 32 TRP 33 ILE 34 HIS 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 SER 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 ALA 49 ARG 50 ILE 51 TYR 52 PRO 52A GLY 53 THR 54 GLY 55 SER 56 THR 57 TYR 58 TYR 59 ASN 60 GLU 61 LYS 62 PHE 63 LYS 64 GLY 65 LYS 66 ALA 67 THR 68 LEU 69 THR 70 ALA 71 ASP 72 LYS 73 SER 74 SER 75 SER 76 THR 77 ALA 78 TYR 79 MET 80 GLN 81 LEU 82 SER 82A THR 82B LEU 82C LYS 83 SER 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 THR 93 ARG 94 TRP 95 GLY 96 PHE 97 ILE 98 PRO 99 VAL 100 ARG 100A GLU 100B ASP 100C TYR 100D VAL 100E MET 100F ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 VAL 127 CYS 128 GLY 129 ASP 130 THR 131 THR 132 GLY 133 SER 134 SER 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 LEU 152 THR 154 TRP 155 ASN 160 SER 161 GLY 162 SER 163 LEU 164 SER 165 SER 166 GLY 167 VAL 169 HIS 170 THR 171 PHE 172 PRO 173 ALA 174 VAL 175 LEU 176 GLN 177 SER 178 ASP 181 LEU 182 TYR 183 THR 184 LEU 185 SER 186 SER 187 SER 188 VAL 189 THR 190 VAL 191 THR 192 SER 193 SER 194 THR 196 TRP 197 PRO 198 SER 200 GLN 201 SER 202 ILE 203 THR 204 CYS 206 ASN 207 VAL 208 ALA 209 HIS 210 PRO 211 ALA 212 SER 213 SER 214 THR 215 LYS 216 VAL 217 ASP 218 LYS 219 LYS 220 ILE 221 GLU 222 PRO 223

Ligands

Unit 3	ZN 601 ZN 602 ZN 603 ZN 604 ZN 605 ZN 606 ZN 607
Unit 4	NPO 551