1YDH - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY STRUCTURE OF A LYSINE DECARBOXYLASE-LIKE PROTEIN FROM ARABIDOPSIS THALIANA GENE AT5G11950
• Keywords: STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, CENT EUKARYOTIC STRUCTURAL GENOMICS, CESG, AT5G11950, LYSINE DECARBOXYLASE-LIKE PROTEIN, UNKNOWN FUNCTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YDH	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	AT5G11950	A	184	1347	64
2	Protein	AT5G11950	B	181	1321	64
3	Ligand	AT5G11950	A	3	0	12
4	Ligand	AT5G11950	B	2	0	8
5	Water			319	0	319
total				689	2668	467

Proteins

Unit 1

GLN 5 ARG 6 SER 7 ARG 8 PHE 9 ARG 10 LYS 11 ILE 12 CYS 13 VAL 14 PHE 15 CYS 16 GLY 17 SER 18 HIS 19 SER 20 GLY 21 HIS 22 ARG 23 GLU 24 VAL 25 PHE 26 SER 27 ASP 28 ALA 29 ALA 30 ILE 31 GLU 32 LEU 33 GLY 34 ASN 35 GLU 36 LEU 37 VAL 38 LYS 39 ARG 40 LYS 41 ILE 42 ASP 43 LEU 44 VAL 45 TYR 46 GLY 47 GLY 48 GLY 49 SER 50 VAL 51 GLY 52 LEU 53 MSE 54 GLY 55 LEU 56 ILE 57 SER 58 ARG 59 ARG 60 VAL 61 TYR 62 GLU 63 GLY 64 GLY 65 LEU 66 HIS 67 VAL 68 LEU 69 GLY 70 ILE 71 ILE 72 PRO 73 LYS 74 ALA 75 LEU 76 MSE 77 PRO 78 ILE 79 GLU 80 ILE 81 SER 82 GLY 83 GLU 84 THR 85 VAL 86 GLY 87 ASP 88 VAL 89 ARG 90 VAL 91 VAL 92 ALA 93 ASP 94 MSE 95 HIS 96 GLU 97 ARG 98 LYS 99 ALA 100 ALA 101 MSE 102 ALA 103 GLN 104 GLU 105 ALA 106 GLU 107 ALA 108 PHE 109 ILE 110 ALA 111 LEU 112 PRO 113 GLY 114 GLY 115 TYR 116 GLY 117 THR 118 MSE 119 GLU 120 GLU 121 LEU 122 LEU 123 GLU 124 MSE 125 ILE 126 THR 127 TRP 128 SER 129 GLN 130 LEU 131 GLY 132 ILE 133 HIS 134 LYS 135 LYS 136 THR 137 VAL 138 GLY 139 LEU 140 LEU 141 ASN 142 VAL 143 ASP 144 GLY 145 TYR 146 TYR 147 ASN 148 ASN 149 LEU 150 LEU 151 ALA 152 LEU 153 PHE 154 ASP 155 THR 156 GLY 157 VAL 158 GLU 159 GLU 160 GLY 161 PHE 162 ILE 163 LYS 164 PRO 165 GLY 166 ALA 167 ARG 168 ASN 169 ILE 170 VAL 171 VAL 172 SER 173 ALA 174 PRO 175 THR 176 ALA 177 LYS 178 GLU 179 LEU 180 MSE 181 GLU 182 LYS 183 MSE 184 GLU 185 GLU 186 TYR 187 THR 188

Unit 2

ARG 8 PHE 9 ARG 10 LYS 11 ILE 12 CYS 13 VAL 14 PHE 15 CYS 16 GLY 17 SER 18 HIS 19 SER 20 GLY 21 HIS 22 ARG 23 GLU 24 VAL 25 PHE 26 SER 27 ASP 28 ALA 29 ALA 30 ILE 31 GLU 32 LEU 33 GLY 34 ASN 35 GLU 36 LEU 37 VAL 38 LYS 39 ARG 40 LYS 41 ILE 42 ASP 43 LEU 44 VAL 45 TYR 46 GLY 47 GLY 48 GLY 49 SER 50 VAL 51 GLY 52 LEU 53 MSE 54 GLY 55 LEU 56 ILE 57 SER 58 ARG 59 ARG 60 VAL 61 TYR 62 GLU 63 GLY 64 GLY 65 LEU 66 HIS 67 VAL 68 LEU 69 GLY 70 ILE 71 ILE 72 PRO 73 LYS 74 ALA 75 LEU 76 MSE 77 PRO 78 ILE 79 GLU 80 ILE 81 SER 82 GLY 83 GLU 84 THR 85 VAL 86 GLY 87 ASP 88 VAL 89 ARG 90 VAL 91 VAL 92 ALA 93 ASP 94 MSE 95 HIS 96 GLU 97 ARG 98 LYS 99 ALA 100 ALA 101 MSE 102 ALA 103 GLN 104 GLU 105 ALA 106 GLU 107 ALA 108 PHE 109 ILE 110 ALA 111 LEU 112 PRO 113 GLY 114 GLY 115 TYR 116 GLY 117 THR 118 MSE 119 GLU 120 GLU 121 LEU 122 LEU 123 GLU 124 MSE 125 ILE 126 THR 127 TRP 128 SER 129 GLN 130 LEU 131 GLY 132 ILE 133 HIS 134 LYS 135 LYS 136 THR 137 VAL 138 GLY 139 LEU 140 LEU 141 ASN 142 VAL 143 ASP 144 GLY 145 TYR 146 TYR 147 ASN 148 ASN 149 LEU 150 LEU 151 ALA 152 LEU 153 PHE 154 ASP 155 THR 156 GLY 157 VAL 158 GLU 159 GLU 160 GLY 161 PHE 162 ILE 163 LYS 164 PRO 165 GLY 166 ALA 167 ARG 168 ASN 169 ILE 170 VAL 171 VAL 172 SER 173 ALA 174 PRO 175 THR 176 ALA 177 LYS 178 GLU 179 LEU 180 MSE 181 GLU 182 LYS 183 MSE 184 GLU 185 GLU 186 TYR 187 THR 188

Ligands

Unit 3	NO3 600 EDO 701 EDO 703
Unit 4	EDO 700 EDO 702