1YD9 - Sequence, Chains, Asymmetric and Biological Units

• Title: 1.6A CRYSTAL STRUCTURE OF THE NON-HISTONE DOMAIN OF THE HISTONE VARIANT MACROH2A1.1.
• Keywords: ALPHA-BETA STRUCTURE, A1PP DOMAIN, MACRO-DOMAIN, STRUCTURAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YD9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CORE HISTONE MACRO-H2A.1	A	188	1414	0
2	Protein	CORE HISTONE MACRO-H2A.1	B	187	1400	0
3	Protein	CORE HISTONE MACRO-H2A.1	C	187	1406	0
4	Protein	CORE HISTONE MACRO-H2A.1	D	188	1409	0
5	Ligand	CORE HISTONE MACRO-H2A.1	A	1	0	1
6	Ligand	CORE HISTONE MACRO-H2A.1	B	1	0	1
7	Ligand	CORE HISTONE MACRO-H2A.1	C	1	0	1
8	Ligand	CORE HISTONE MACRO-H2A.1	D	1	0	1
9	Water			540	0	540
total				1294	5629	544

Proteins

Unit 1	GLY 6 PHE 7 THR 8 VAL 9 LEU 10 SER 11 THR 12 LYS 13 SER 14 LEU 15 PHE 16 LEU 17 GLY 18 GLN 19 LYS 20 LEU 21 GLN 22 VAL 23 VAL 24 GLN 25 ALA 26 ASP 27 ILE 28 ALA 29 SER 30 ILE 31 ASP 32 SER 33 ASP 34 ALA 35 VAL 36 VAL 37 HIS 38 PRO 39 THR 40 ASN 41 THR 42 ASP 43 PHE 44 TYR 45 ILE 46 GLY 47 GLY 48 GLU 49 VAL 50 GLY 51 SER 52 THR 53 LEU 54 GLU 55 LYS 56 LYS 57 GLY 58 GLY 59 LYS 60 GLU 61 PHE 62 VAL 63 GLU 64 ALA 65 VAL 66 LEU 67 GLU 68 LEU 69 ARG 70 LYS 71 LYS 72 ASN 73 GLY 74 PRO 75 LEU 76 GLU 77 VAL 78 ALA 79 GLY 80 ALA 81 ALA 82 VAL 83 SER 84 ALA 85 GLY 86 HIS 87 GLY 88 LEU 89 PRO 90 ALA 91 LYS 92 PHE 93 VAL 94 ILE 95 HIS 96 CYS 97 ASN 98 SER 99 PRO 100 VAL 101 TRP 102 GLY 103 SER 104 ASP 105 LYS 106 CYS 107 GLU 108 GLU 109 LEU 110 LEU 111 GLU 112 LYS 113 THR 114 VAL 115 LYS 116 ASN 117 CYS 118 LEU 119 ALA 120 LEU 121 ALA 122 ASP 123 ASP 124 ARG 125 LYS 126 LEU 127 LYS 128 SER 129 ILE 130 ALA 131 PHE 132 PRO 133 SER 134 ILE 135 GLY 136 SER 137 GLY 138 ARG 139 ASN 140 GLY 141 PHE 142 PRO 143 LYS 144 GLN 145 THR 146 ALA 147 ALA 148 GLN 149 LEU 150 ILE 151 LEU 152 LYS 153 ALA 154 ILE 155 SER 156 SER 157 TYR 158 PHE 159 VAL 160 SER 161 THR 162 MET 163 SER 164 SER 165 SER 166 ILE 167 LYS 168 THR 169 VAL 170 TYR 171 PHE 172 VAL 173 LEU 174 PHE 175 ASP 176 SER 177 GLU 178 SER 179 ILE 180 GLY 181 ILE 182 TYR 183 VAL 184 GLN 185 GLU 186 MET 187 ALA 188 LYS 189 LEU 190 ASP 191 ALA 192 ASN 193
Unit 2	GLY 6 PHE 7 THR 8 VAL 9 LEU 10 SER 11 THR 12 LYS 13 SER 14 LEU 15 PHE 16 LEU 17 GLY 18 GLN 19 LYS 20 LEU 21 GLN 22 VAL 23 VAL 24 GLN 25 ALA 26 ASP 27 ILE 28 ALA 29 SER 30 ILE 31 ASP 32 SER 33 ASP 34 ALA 35 VAL 36 VAL 37 HIS 38 PRO 39 THR 40 ASN 41 THR 42 ASP 43 PHE 44 TYR 45 ILE 46 GLY 47 GLY 48 GLU 49 VAL 50 GLY 51 SER 52 THR 53 LEU 54 GLU 55 LYS 56 LYS 57 GLY 58 GLY 59 LYS 60 GLU 61 PHE 62 VAL 63 GLU 64 ALA 65 VAL 66 LEU 67 GLU 68 LEU 69 ARG 70 LYS 71 LYS 72 ASN 73 GLY 74 PRO 75 LEU 76 GLU 77 VAL 78 ALA 79 GLY 80 ALA 81 ALA 82 VAL 83 SER 84 ALA 85 GLY 86 HIS 87 GLY 88 LEU 89 PRO 90 ALA 91 LYS 92 PHE 93 VAL 94 ILE 95 HIS 96 CYS 97 ASN 98 SER 99 PRO 100 VAL 101 TRP 102 GLY 103 SER 104 ASP 105 LYS 106 CYS 107 GLU 108 GLU 109 LEU 110 LEU 111 GLU 112 LYS 113 THR 114 VAL 115 LYS 116 ASN 117 CYS 118 LEU 119 ALA 120 LEU 121 ALA 122 ASP 123 ASP 124 ARG 125 LYS 126 LEU 127 LYS 128 SER 129 ILE 130 ALA 131 PHE 132 PRO 133 SER 134 ILE 135 GLY 136 SER 137 GLY 138 ARG 139 ASN 140 GLY 141 PHE 142 PRO 143 LYS 144 GLN 145 THR 146 ALA 147 ALA 148 GLN 149 LEU 150 ILE 151 LEU 152 LYS 153 ALA 154 ILE 155 SER 156 SER 157 TYR 158 PHE 159 VAL 160 SER 161 THR 162 MET 163 SER 164 SER 165 SER 166 ILE 167 LYS 168 THR 169 VAL 170 TYR 171 PHE 172 VAL 173 LEU 174 PHE 175 ASP 176 SER 177 GLU 178 SER 179 ILE 180 GLY 181 ILE 182 TYR 183 VAL 184 GLN 185 GLU 186 MET 187 ALA 188 LYS 189 LEU 190 ASP 191 ALA 192
Unit 3	SER 5 GLY 6 PHE 7 THR 8 VAL 9 LEU 10 SER 11 THR 12 LYS 13 SER 14 LEU 15 PHE 16 LEU 17 GLY 18 GLN 19 LYS 20 LEU 21 GLN 22 VAL 23 VAL 24 GLN 25 ALA 26 ASP 27 ILE 28 ALA 29 SER 30 ILE 31 ASP 32 SER 33 ASP 34 ALA 35 VAL 36 VAL 37 HIS 38 PRO 39 THR 40 ASN 41 THR 42 ASP 43 PHE 44 TYR 45 ILE 46 GLY 47 GLY 48 GLU 49 VAL 50 GLY 51 SER 52 THR 53 LEU 54 GLU 55 LYS 56 LYS 57 GLY 58 GLY 59 LYS 60 GLU 61 PHE 62 VAL 63 GLU 64 ALA 65 VAL 66 LEU 67 GLU 68 LEU 69 ARG 70 LYS 71 LYS 72 ASN 73 GLY 74 PRO 75 LEU 76 GLU 77 VAL 78 ALA 79 GLY 80 ALA 81 ALA 82 VAL 83 SER 84 ALA 85 GLY 86 HIS 87 GLY 88 LEU 89 PRO 90 ALA 91 LYS 92 PHE 93 VAL 94 ILE 95 HIS 96 CYS 97 ASN 98 SER 99 PRO 100 VAL 101 TRP 102 GLY 103 SER 104 ASP 105 LYS 106 CYS 107 GLU 108 GLU 109 LEU 110 LEU 111 GLU 112 LYS 113 THR 114 VAL 115 LYS 116 ASN 117 CYS 118 LEU 119 ALA 120 LEU 121 ALA 122 ASP 123 ASP 124 ARG 125 LYS 126 LEU 127 LYS 128 SER 129 ILE 130 ALA 131 PHE 132 PRO 133 SER 134 ILE 135 GLY 136 SER 137 GLY 138 ARG 139 ASN 140 GLY 141 PHE 142 PRO 143 LYS 144 GLN 145 THR 146 ALA 147 ALA 148 GLN 149 LEU 150 ILE 151 LEU 152 LYS 153 ALA 154 ILE 155 SER 156 SER 157 TYR 158 PHE 159 VAL 160 SER 161 THR 162 MET 163 SER 164 SER 165 SER 166 ILE 167 LYS 168 THR 169 VAL 170 TYR 171 PHE 172 VAL 173 LEU 174 PHE 175 ASP 176 SER 177 GLU 178 SER 179 ILE 180 GLY 181 ILE 182 TYR 183 VAL 184 GLN 185 GLU 186 MET 187 ALA 188 LYS 189 LEU 190 ASP 191
Unit 4	GLY 6 PHE 7 THR 8 VAL 9 LEU 10 SER 11 THR 12 LYS 13 SER 14 LEU 15 PHE 16 LEU 17 GLY 18 GLN 19 LYS 20 LEU 21 GLN 22 VAL 23 VAL 24 GLN 25 ALA 26 ASP 27 ILE 28 ALA 29 SER 30 ILE 31 ASP 32 SER 33 ASP 34 ALA 35 VAL 36 VAL 37 HIS 38 PRO 39 THR 40 ASN 41 THR 42 ASP 43 PHE 44 TYR 45 ILE 46 GLY 47 GLY 48 GLU 49 VAL 50 GLY 51 SER 52 THR 53 LEU 54 GLU 55 LYS 56 LYS 57 GLY 58 GLY 59 LYS 60 GLU 61 PHE 62 VAL 63 GLU 64 ALA 65 VAL 66 LEU 67 GLU 68 LEU 69 ARG 70 LYS 71 LYS 72 ASN 73 GLY 74 PRO 75 LEU 76 GLU 77 VAL 78 ALA 79 GLY 80 ALA 81 ALA 82 VAL 83 SER 84 ALA 85 GLY 86 HIS 87 GLY 88 LEU 89 PRO 90 ALA 91 LYS 92 PHE 93 VAL 94 ILE 95 HIS 96 CYS 97 ASN 98 SER 99 PRO 100 VAL 101 TRP 102 GLY 103 SER 104 ASP 105 LYS 106 CYS 107 GLU 108 GLU 109 LEU 110 LEU 111 GLU 112 LYS 113 THR 114 VAL 115 LYS 116 ASN 117 CYS 118 LEU 119 ALA 120 LEU 121 ALA 122 ASP 123 ASP 124 ARG 125 LYS 126 LEU 127 LYS 128 SER 129 ILE 130 ALA 131 PHE 132 PRO 133 SER 134 ILE 135 GLY 136 SER 137 GLY 138 ARG 139 ASN 140 GLY 141 PHE 142 PRO 143 LYS 144 GLN 145 THR 146 ALA 147 ALA 148 GLN 149 LEU 150 ILE 151 LEU 152 LYS 153 ALA 154 ILE 155 SER 156 SER 157 TYR 158 PHE 159 VAL 160 SER 161 THR 162 MET 163 SER 164 SER 165 SER 166 ILE 167 LYS 168 THR 169 VAL 170 TYR 171 PHE 172 VAL 173 LEU 174 PHE 175 ASP 176 SER 177 GLU 178 SER 179 ILE 180 GLY 181 ILE 182 TYR 183 VAL 184 GLN 185 GLU 186 MET 187 ALA 188 LYS 189 LEU 190 ASP 191 ALA 192 ASN 193

Ligands

Unit 5	AU 3309
Unit 6	AU 3306
Unit 7	AU 3307
Unit 8	AU 3308