1YD6 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE GIY-YIG N-TERMINAL ENDONUCLEASE DOMAIN OF UVRC FROM BACILLUS CALDOTENAX
• Keywords: DNA BINDING PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YD6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	UVRC	A	95	767	0
2	Protein	UVRC	B	88	678	0
3	Protein	UVRC	C	94	755	0
4	Protein	UVRC	D	96	766	0
5	Ligand	UVRC	A	3	0	11
6	Ligand	UVRC	C	3	0	7
7	Water			126	0	126
total				505	2966	144

Proteins

Unit 1	MET 1 ASN 2 GLU 3 ARG 4 LEU 5 LYS 6 GLU 7 LYS 8 LEU 9 ALA 10 VAL 11 LEU 12 PRO 13 GLU 14 GLN 15 PRO 16 GLY 17 CYS 18 TYR 19 LEU 20 MET 21 LYS 22 ASP 23 LYS 24 HIS 25 GLY 26 THR 27 VAL 28 ILE 29 TYR 30 VAL 31 GLY 32 LYS 33 ALA 34 LYS 35 SER 36 LEU 37 LYS 38 GLU 39 ARG 40 VAL 41 ARG 42 SER 43 TYR 44 PHE 45 THR 46 GLY 47 THR 48 HIS 49 ASP 50 GLY 51 LYS 52 THR 53 GLN 54 ARG 55 LEU 56 VAL 57 GLU 58 GLU 59 ILE 60 ALA 61 ASP 62 PHE 63 GLU 64 TYR 65 ILE 66 VAL 67 THR 68 SER 69 SER 70 ASN 71 ALA 72 GLU 73 ALA 74 LEU 75 ILE 76 LEU 77 GLU 78 MET 79 ASN 80 LEU 81 ILE 82 LYS 83 LYS 84 HIS 85 ASP 86 PRO 87 LYS 88 TYR 89 ASN 90 VAL 91 MET 92 LEU 93 LYS 94 ASP 95
Unit 2	LYS 8 LEU 9 ALA 10 VAL 11 LEU 12 PRO 13 GLU 14 GLN 15 PRO 16 GLY 17 CYS 18 TYR 19 LEU 20 MET 21 LYS 22 ASP 23 LYS 24 HIS 25 GLY 26 THR 27 VAL 28 ILE 29 TYR 30 VAL 31 GLY 32 LYS 33 ALA 34 LYS 35 SER 36 LEU 37 LYS 38 GLU 39 ARG 40 VAL 41 ARG 42 SER 43 TYR 44 PHE 45 THR 46 GLY 47 THR 48 HIS 49 ASP 50 GLY 51 LYS 52 THR 53 GLN 54 ARG 55 LEU 56 VAL 57 GLU 58 GLU 59 ILE 60 ALA 61 ASP 62 PHE 63 GLU 64 TYR 65 ILE 66 VAL 67 THR 68 SER 69 SER 70 ASN 71 ALA 72 GLU 73 ALA 74 LEU 75 ILE 76 LEU 77 GLU 78 MET 79 ASN 80 LEU 81 ILE 82 LYS 83 LYS 84 HIS 85 ASP 86 PRO 87 LYS 88 TYR 89 ASN 90 VAL 91 MET 92 LEU 93 LYS 94 ASP 95
Unit 3	MET 1 ASN 2 GLU 3 ARG 4 LEU 5 LYS 6 GLU 7 LYS 8 LEU 9 ALA 10 VAL 11 LEU 12 PRO 13 GLU 14 GLN 15 PRO 16 GLY 17 CYS 18 TYR 19 LEU 20 MET 21 LYS 22 ASP 23 LYS 24 HIS 25 GLY 26 THR 27 VAL 28 ILE 29 TYR 30 VAL 31 GLY 32 LYS 33 ALA 34 LYS 35 SER 36 LEU 37 LYS 38 GLU 39 ARG 40 VAL 41 ARG 42 SER 43 TYR 44 PHE 45 THR 46 GLY 47 THR 48 HIS 49 ASP 50 GLY 51 LYS 52 THR 53 GLN 54 ARG 55 LEU 56 VAL 57 GLU 58 GLU 59 ILE 60 ALA 61 ASP 62 PHE 63 GLU 64 TYR 65 ILE 66 VAL 67 THR 68 SER 69 SER 70 ASN 71 ALA 72 GLU 73 ALA 74 LEU 75 ILE 76 LEU 77 GLU 78 MET 79 ASN 80 LEU 81 ILE 82 LYS 83 LYS 84 HIS 85 ASP 86 PRO 87 LYS 88 TYR 89 ASN 90 VAL 91 MET 92 LEU 93 LYS 94
Unit 4	ASN 2 GLU 3 ARG 4 LEU 5 LYS 6 GLU 7 LYS 8 LEU 9 ALA 10 VAL 11 LEU 12 PRO 13 GLU 14 GLN 15 PRO 16 GLY 17 CYS 18 TYR 19 LEU 20 MET 21 LYS 22 ASP 23 LYS 24 HIS 25 GLY 26 THR 27 VAL 28 ILE 29 TYR 30 VAL 31 GLY 32 LYS 33 ALA 34 LYS 35 SER 36 LEU 37 LYS 38 GLU 39 ARG 40 VAL 41 ARG 42 SER 43 TYR 44 PHE 45 THR 46 GLY 47 THR 48 HIS 49 ASP 50 GLY 51 LYS 52 THR 53 GLN 54 ARG 55 LEU 56 VAL 57 GLU 58 GLU 59 ILE 60 ALA 61 ASP 62 PHE 63 GLU 64 TYR 65 ILE 66 VAL 67 THR 68 SER 69 SER 70 ASN 71 ALA 72 GLU 73 ALA 74 LEU 75 ILE 76 LEU 77 GLU 78 MET 79 ASN 80 LEU 81 ILE 82 LYS 83 LYS 84 HIS 85 ASP 86 PRO 87 LYS 88 TYR 89 ASN 90 VAL 91 MET 92 LEU 93 LYS 94 ASP 95 ASP 96 LYS 97

Ligands

Unit 5	CL 1001 SO4 1002 SO4 1004
Unit 6	SO4 1003 CL 1005 CL 1006