1YAK - Sequence, Chains, Asymmetric and Biological Units

• Title: COMPLEX OF BACILLUS SUBTILIS TENA WITH 4-AMINO-2-METHYL-5- HYDROXYMETHYLPYRIMIDINE
• Keywords: THIAMINASE, TRANSCRIPTION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1YAK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRANSCRIPTIONAL ACTIVATOR TENA	A	219	1810	0
2	Protein	TRANSCRIPTIONAL ACTIVATOR TENA	B	218	1798	0
3	Protein	TRANSCRIPTIONAL ACTIVATOR TENA	C	220	1812	0
4	Protein	TRANSCRIPTIONAL ACTIVATOR TENA	D	219	1810	0
5	Ligand	TRANSCRIPTIONAL ACTIVATOR TENA	A	1	0	10
6	Ligand	TRANSCRIPTIONAL ACTIVATOR TENA	B	1	0	10
7	Ligand	TRANSCRIPTIONAL ACTIVATOR TENA	C	1	0	10
8	Ligand	TRANSCRIPTIONAL ACTIVATOR TENA	D	1	0	10
9	Water			190	0	190
total				1070	7230	230

Proteins

Unit 1	LYS 2 PHE 3 SER 4 GLU 5 GLU 6 CYS 7 ARG 8 SER 9 ALA 10 ALA 11 ALA 12 GLU 13 TRP 14 TRP 15 GLU 16 GLY 17 SER 18 PHE 19 VAL 20 HIS 21 PRO 22 PHE 23 VAL 24 GLN 25 GLY 26 ILE 27 GLY 28 ASP 29 GLY 30 THR 31 LEU 32 PRO 33 ILE 34 ASP 35 ARG 36 PHE 37 LYS 38 TYR 39 TYR 40 VAL 41 LEU 42 GLN 43 ASP 44 SER 45 TYR 46 TYR 47 LEU 48 THR 49 HIS 50 PHE 51 ALA 52 LYS 53 VAL 54 GLN 55 SER 56 PHE 57 GLY 58 ALA 59 ALA 60 TYR 61 ALA 62 LYS 63 ASP 64 LEU 65 TYR 66 THR 67 THR 68 GLY 69 ARG 70 MET 71 ALA 72 SER 73 HIS 74 ALA 75 GLN 76 GLY 77 THR 78 TYR 79 GLU 80 ALA 81 GLU 82 MET 83 ALA 84 LEU 85 HIS 86 ARG 87 GLU 88 PHE 89 ALA 90 GLU 91 LEU 92 LEU 93 GLU 94 ILE 95 SER 96 GLU 97 GLU 98 GLU 99 ARG 100 LYS 101 ALA 102 PHE 103 LYS 104 PRO 105 SER 106 PRO 107 THR 108 ALA 109 TYR 110 SER 111 TYR 112 THR 113 SER 114 HIS 115 MET 116 TYR 117 ARG 118 SER 119 VAL 120 LEU 121 SER 122 GLY 123 ASN 124 PHE 125 ALA 126 GLU 127 ILE 128 LEU 129 ALA 130 ALA 131 LEU 132 LEU 133 PRO 134 CYS 135 TYR 136 TRP 137 LEU 138 TYR 139 TYR 140 GLU 141 VAL 142 GLY 143 GLU 144 LYS 145 LEU 146 LEU 147 HIS 148 CYS 149 ASP 150 PRO 151 GLY 152 HIS 153 PRO 154 ILE 155 TYR 156 GLN 157 LYS 158 TRP 159 ILE 160 GLY 161 THR 162 TYR 163 GLY 164 GLY 165 ASP 166 TRP 167 PHE 168 ARG 169 GLN 170 GLN 171 VAL 172 GLU 173 GLU 174 GLN 175 ILE 176 ASN 177 ARG 178 PHE 179 ASP 180 GLU 181 LEU 182 ALA 183 GLU 184 ASN 185 SER 186 THR 187 GLU 188 GLU 189 VAL 190 ARG 191 ALA 192 LYS 193 MET 194 LYS 195 GLU 196 ASN 197 PHE 198 VAL 199 ILE 200 SER 201 SER 202 TYR 203 TYR 204 GLU 205 TYR 206 GLN 207 PHE 208 TRP 209 GLY 210 MET 211 ALA 212 TYR 213 ARG 214 LYS 215 GLU 216 GLY 217 TRP 218 SER 219 ASP 220
Unit 2	LYS 2 PHE 3 SER 4 GLU 5 GLU 6 CYS 7 ARG 8 SER 9 ALA 10 ALA 11 ALA 12 GLU 13 TRP 14 TRP 15 GLU 16 GLY 17 SER 18 PHE 19 VAL 20 HIS 21 PRO 22 PHE 23 VAL 24 GLN 25 GLY 26 ILE 27 GLY 28 ASP 29 GLY 30 THR 31 LEU 32 PRO 33 ILE 34 ASP 35 ARG 36 PHE 37 LYS 38 TYR 39 TYR 40 VAL 41 LEU 42 GLN 43 ASP 44 SER 45 TYR 46 TYR 47 LEU 48 THR 49 HIS 50 PHE 51 ALA 52 LYS 53 VAL 54 GLN 55 SER 56 PHE 57 GLY 58 ALA 59 ALA 60 TYR 61 ALA 62 LYS 63 ASP 64 LEU 65 TYR 66 THR 67 THR 68 GLY 69 ARG 70 MET 71 ALA 72 SER 73 HIS 74 ALA 75 GLN 76 GLY 77 THR 78 TYR 79 GLU 80 ALA 81 GLU 82 MET 83 ALA 84 LEU 85 HIS 86 ARG 87 GLU 88 PHE 89 ALA 90 GLU 91 LEU 92 LEU 93 GLU 94 ILE 95 SER 96 GLU 97 GLU 98 GLU 99 ARG 100 LYS 101 ALA 102 PHE 103 LYS 104 PRO 105 SER 106 PRO 107 THR 108 ALA 109 TYR 110 SER 111 TYR 112 THR 113 SER 114 HIS 115 MET 116 TYR 117 ARG 118 SER 119 VAL 120 LEU 121 SER 122 GLY 123 ASN 124 PHE 125 ALA 126 GLU 127 ILE 128 LEU 129 ALA 130 ALA 131 LEU 132 LEU 133 PRO 134 CYS 135 TYR 136 TRP 137 LEU 138 TYR 139 TYR 140 GLU 141 VAL 142 GLY 143 GLU 144 LYS 145 LEU 146 LEU 147 HIS 148 CYS 149 ASP 150 PRO 151 GLY 152 HIS 153 PRO 154 ILE 155 TYR 156 GLN 157 LYS 158 TRP 159 ILE 160 GLY 161 THR 162 TYR 163 GLY 164 GLY 165 ASP 166 TRP 167 PHE 168 ARG 169 GLN 170 GLN 171 VAL 172 GLU 173 GLU 174 GLN 175 ILE 176 ASN 177 ARG 178 PHE 179 ASP 180 GLU 181 LEU 182 ALA 183 GLU 184 ASN 185 SER 186 THR 187 GLU 188 GLU 189 VAL 190 ARG 191 ALA 192 LYS 193 MET 194 LYS 195 GLU 196 ASN 197 PHE 198 VAL 199 ILE 200 SER 201 SER 202 TYR 203 TYR 204 GLU 205 TYR 206 GLN 207 PHE 208 TRP 209 GLY 210 MET 211 ALA 212 TYR 213 ARG 214 LYS 215 GLU 216 GLY 217 TRP 218 SER 219
Unit 3	PHE 3 SER 4 GLU 5 GLU 6 CYS 7 ARG 8 SER 9 ALA 10 ALA 11 ALA 12 GLU 13 TRP 14 TRP 15 GLU 16 GLY 17 SER 18 PHE 19 VAL 20 HIS 21 PRO 22 PHE 23 VAL 24 GLN 25 GLY 26 ILE 27 GLY 28 ASP 29 GLY 30 THR 31 LEU 32 PRO 33 ILE 34 ASP 35 ARG 36 PHE 37 LYS 38 TYR 39 TYR 40 VAL 41 LEU 42 GLN 43 ASP 44 SER 45 TYR 46 TYR 47 LEU 48 THR 49 HIS 50 PHE 51 ALA 52 LYS 53 VAL 54 GLN 55 SER 56 PHE 57 GLY 58 ALA 59 ALA 60 TYR 61 ALA 62 LYS 63 ASP 64 LEU 65 TYR 66 THR 67 THR 68 GLY 69 ARG 70 MET 71 ALA 72 SER 73 HIS 74 ALA 75 GLN 76 GLY 77 THR 78 TYR 79 GLU 80 ALA 81 GLU 82 MET 83 ALA 84 LEU 85 HIS 86 ARG 87 GLU 88 PHE 89 ALA 90 GLU 91 LEU 92 LEU 93 GLU 94 ILE 95 SER 96 GLU 97 GLU 98 GLU 99 ARG 100 LYS 101 ALA 102 PHE 103 LYS 104 PRO 105 SER 106 PRO 107 THR 108 ALA 109 TYR 110 SER 111 TYR 112 THR 113 SER 114 HIS 115 MET 116 TYR 117 ARG 118 SER 119 VAL 120 LEU 121 SER 122 GLY 123 ASN 124 PHE 125 ALA 126 GLU 127 ILE 128 LEU 129 ALA 130 ALA 131 LEU 132 LEU 133 PRO 134 CYS 135 TYR 136 TRP 137 LEU 138 TYR 139 TYR 140 GLU 141 VAL 142 GLY 143 GLU 144 LYS 145 LEU 146 LEU 147 HIS 148 CYS 149 ASP 150 PRO 151 GLY 152 HIS 153 PRO 154 ILE 155 TYR 156 GLN 157 LYS 158 TRP 159 ILE 160 GLY 161 THR 162 TYR 163 GLY 164 GLY 165 ASP 166 TRP 167 PHE 168 ARG 169 GLN 170 GLN 171 VAL 172 GLU 173 GLU 174 GLN 175 ILE 176 ASN 177 ARG 178 PHE 179 ASP 180 GLU 181 LEU 182 ALA 183 GLU 184 ASN 185 SER 186 THR 187 GLU 188 GLU 189 VAL 190 ARG 191 ALA 192 LYS 193 MET 194 LYS 195 GLU 196 ASN 197 PHE 198 VAL 199 ILE 200 SER 201 SER 202 TYR 203 TYR 204 GLU 205 TYR 206 GLN 207 PHE 208 TRP 209 GLY 210 MET 211 ALA 212 TYR 213 ARG 214 LYS 215 GLU 216 GLY 217 TRP 218 SER 219 ASP 220 SER 221 ALA 222
Unit 4	LYS 2 PHE 3 SER 4 GLU 5 GLU 6 CYS 7 ARG 8 SER 9 ALA 10 ALA 11 ALA 12 GLU 13 TRP 14 TRP 15 GLU 16 GLY 17 SER 18 PHE 19 VAL 20 HIS 21 PRO 22 PHE 23 VAL 24 GLN 25 GLY 26 ILE 27 GLY 28 ASP 29 GLY 30 THR 31 LEU 32 PRO 33 ILE 34 ASP 35 ARG 36 PHE 37 LYS 38 TYR 39 TYR 40 VAL 41 LEU 42 GLN 43 ASP 44 SER 45 TYR 46 TYR 47 LEU 48 THR 49 HIS 50 PHE 51 ALA 52 LYS 53 VAL 54 GLN 55 SER 56 PHE 57 GLY 58 ALA 59 ALA 60 TYR 61 ALA 62 LYS 63 ASP 64 LEU 65 TYR 66 THR 67 THR 68 GLY 69 ARG 70 MET 71 ALA 72 SER 73 HIS 74 ALA 75 GLN 76 GLY 77 THR 78 TYR 79 GLU 80 ALA 81 GLU 82 MET 83 ALA 84 LEU 85 HIS 86 ARG 87 GLU 88 PHE 89 ALA 90 GLU 91 LEU 92 LEU 93 GLU 94 ILE 95 SER 96 GLU 97 GLU 98 GLU 99 ARG 100 LYS 101 ALA 102 PHE 103 LYS 104 PRO 105 SER 106 PRO 107 THR 108 ALA 109 TYR 110 SER 111 TYR 112 THR 113 SER 114 HIS 115 MET 116 TYR 117 ARG 118 SER 119 VAL 120 LEU 121 SER 122 GLY 123 ASN 124 PHE 125 ALA 126 GLU 127 ILE 128 LEU 129 ALA 130 ALA 131 LEU 132 LEU 133 PRO 134 CYS 135 TYR 136 TRP 137 LEU 138 TYR 139 TYR 140 GLU 141 VAL 142 GLY 143 GLU 144 LYS 145 LEU 146 LEU 147 HIS 148 CYS 149 ASP 150 PRO 151 GLY 152 HIS 153 PRO 154 ILE 155 TYR 156 GLN 157 LYS 158 TRP 159 ILE 160 GLY 161 THR 162 TYR 163 GLY 164 GLY 165 ASP 166 TRP 167 PHE 168 ARG 169 GLN 170 GLN 171 VAL 172 GLU 173 GLU 174 GLN 175 ILE 176 ASN 177 ARG 178 PHE 179 ASP 180 GLU 181 LEU 182 ALA 183 GLU 184 ASN 185 SER 186 THR 187 GLU 188 GLU 189 VAL 190 ARG 191 ALA 192 LYS 193 MET 194 LYS 195 GLU 196 ASN 197 PHE 198 VAL 199 ILE 200 SER 201 SER 202 TYR 203 TYR 204 GLU 205 TYR 206 GLN 207 PHE 208 TRP 209 GLY 210 MET 211 ALA 212 TYR 213 ARG 214 LYS 215 GLU 216 GLY 217 TRP 218 SER 219 ASP 220

Ligands

Unit 5	HMH 301
Unit 6	HMH 303
Unit 7	HMH 304
Unit 8	HMH 302