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Title | HIV-1 DIS(MAL) DUPLEX PB-SOAKED | |
Keywords | RNA, HIV-1, METAL IONS, BULGE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1Y95 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 23 | 490 | 0 | |
2 | RNA | B | 23 | 490 | 0 | |
3 | Ligand | 5'- R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP *CP*AP*AP*G)-3' | A | 7 | 0 | 7 |
4 | Ligand | 5'- R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP *CP*AP*AP*G)-3' | B | 6 | 0 | 6 |
5 | Water | 44 | 0 | 44 | ||
total | 103 | 980 | 57 |
Unit 1 | C1 U2 U3 G4 C5 U6 G7 A8 G9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23 |
Unit 2 | C1 U2 U3 G4 C5 U6 G7 A8 G9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23 |
Unit 3 | MG30 MG32 PB36 MG37 MG38 MG40 MG43 |
Unit 4 | PB31 MG33 MG34 PB35 MG41 MG42 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |