1Y8P - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE PDK3-L2 COMPLEX
• Keywords: PYRUVATE DEHYDROGENASE KINASE 3, LIPOYL-BEARING DOMAIN, PROT PROTEIN COMPLEX, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1Y8P	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	381	3100	0
2	Protein	DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COM PYRUVATE DEHYDROGENASE COMPLEX	B	97	736	0
3	Ligand		A	4	0	34
4	Ligand	DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COM PYRUVATE DEHYDROGENASE COMPLEX	B	1	0	11
5	Water			56	0	56
total				539	3836	101

Proteins

Unit 1

VAL 12 PRO 13 LYS 14 GLN 15 ILE 16 GLU 17 ARG 18 TYR 19 SER 20 ARG 21 PHE 22 SER 23 PRO 24 SER 25 PRO 26 LEU 27 SER 28 ILE 29 LYS 30 GLN 31 PHE 32 LEU 33 ASP 34 PHE 35 GLY 36 ARG 37 ASP 38 ASN 39 ALA 40 CYS 41 GLU 42 LYS 43 THR 44 SER 45 TYR 46 MET 47 PHE 48 LEU 49 ARG 50 LYS 51 GLU 52 LEU 53 PRO 54 VAL 55 ARG 56 LEU 57 ALA 58 ASN 59 THR 60 MET 61 ARG 62 GLU 63 VAL 64 ASN 65 LEU 66 LEU 67 PRO 68 ASP 69 ASN 70 LEU 71 LEU 72 ASN 73 ARG 74 PRO 75 SER 76 VAL 77 GLY 78 LEU 79 VAL 80 GLN 81 SER 82 TRP 83 TYR 84 MET 85 GLN 86 SER 87 PHE 88 LEU 89 GLU 90 LEU 91 LEU 92 GLU 93 TYR 94 GLU 95 ASN 96 LYS 97 SER 98 PRO 99 GLU 100 ASP 101 PRO 102 GLN 103 VAL 104 LEU 105 ASP 106 ASN 107 PHE 108 LEU 109 GLN 110 VAL 111 LEU 112 ILE 113 LYS 114 VAL 115 ARG 116 ASN 117 ARG 118 HIS 119 ASN 120 ASP 121 VAL 122 VAL 123 PRO 124 THR 125 MET 126 ALA 127 GLN 128 GLY 129 VAL 130 ILE 131 GLU 132 TYR 133 LYS 134 GLU 135 LYS 136 PHE 137 GLY 138 PHE 139 ASP 140 PRO 141 PHE 142 ILE 143 SER 144 THR 145 ASN 146 ILE 147 GLN 148 TYR 149 PHE 150 LEU 151 ASP 152 ARG 153 PHE 154 TYR 155 THR 156 ASN 157 ARG 158 ILE 159 SER 160 PHE 161 ARG 162 MET 163 LEU 164 ILE 165 ASN 166 GLN 167 HIS 168 THR 169 LEU 170 LEU 171 PHE 172 GLY 173 GLY 174 ASP 175 THR 176 ASN 177 PRO 178 VAL 179 HIS 180 PRO 181 LYS 182 HIS 183 ILE 184 GLY 185 SER 186 ILE 187 ASP 188 PRO 189 THR 190 CYS 191 ASN 192 VAL 193 ALA 194 ASP 195 VAL 196 VAL 197 LYS 198 ASP 199 ALA 200 TYR 201 GLU 202 THR 203 ALA 204 LYS 205 MET 206 LEU 207 CYS 208 GLU 209 GLN 210 TYR 211 TYR 212 LEU 213 VAL 214 ALA 215 PRO 216 GLU 217 LEU 218 GLU 219 VAL 220 GLU 221 GLU 222 PHE 223 ASN 224 ALA 225 LYS 226 ALA 227 PRO 228 ASP 229 LYS 230 PRO 231 ILE 232 GLN 233 VAL 234 VAL 235 TYR 236 VAL 237 PRO 238 SER 239 HIS 240 LEU 241 PHE 242 HIS 243 MET 244 LEU 245 PHE 246 GLU 247 LEU 248 PHE 249 LYS 250 ASN 251 SER 252 MET 253 ARG 254 ALA 255 THR 256 VAL 257 GLU 258 LEU 259 TYR 260 GLU 261 ASP 262 ARG 263 LYS 264 GLU 265 GLY 266 TYR 267 PRO 268 ALA 269 VAL 270 LYS 271 THR 272 LEU 273 VAL 274 THR 275 LEU 276 GLY 277 LYS 278 GLU 279 ASP 280 LEU 281 SER 282 ILE 283 LYS 284 ILE 285 SER 286 ASP 287 LEU 288 GLY 289 GLY 290 GLY 291 VAL 292 PRO 293 LEU 294 ARG 295 LYS 296 ILE 297 ASP 298 ARG 299 LEU 300 PHE 301 ASN 302 TYR 303 MET 304 TYR 305 SER 306 THR 307 ALA 308 PRO 309 ARG 310 PRO 320 LEU 321 ALA 322 GLY 323 PHE 324 GLY 325 TYR 326 GLY 327 LEU 328 PRO 329 ILE 330 SER 331 ARG 332 LEU 333 TYR 334 ALA 335 ARG 336 TYR 337 PHE 338 GLN 339 GLY 340 ASP 341 LEU 342 LYS 343 LEU 344 TYR 345 SER 346 MET 347 GLU 348 GLY 349 VAL 350 GLY 351 THR 352 ASP 353 ALA 354 VAL 355 ILE 356 TYR 357 LEU 358 LYS 359 ALA 360 LEU 361 SER 362 SER 363 GLU 364 SER 365 PHE 366 GLU 367 ARG 368 LEU 369 PRO 370 VAL 371 PHE 372 ASN 373 LYS 374 SER 375 ALA 376 TRP 377 ARG 378 HIS 379 TYR 380 LYS 381 THR 382 THR 383 PRO 384 GLU 385 ALA 386 ASP 387 ASP 388 TRP 389 SER 390 ASN 391 PRO 392 SER 393 SER 394 GLU 395 PRO 396 ARG 397 ASP 398 ALA 399 SER 400 LYS 401

Unit 2

SER 128 TYR 129 PRO 130 PRO 131 HIS 132 MET 133 GLN 134 VAL 135 LEU 136 LEU 137 PRO 138 ALA 139 LEU 140 SER 141 PRO 142 THR 143 MET 144 THR 145 MET 146 GLY 147 THR 148 VAL 149 GLN 150 ARG 151 TRP 152 GLU 153 LYS 154 LYS 155 VAL 156 GLY 157 GLU 158 LYS 159 LEU 160 SER 161 GLU 162 GLY 163 ASP 164 LEU 165 LEU 166 ALA 167 GLU 168 ILE 169 GLU 170 THR 171 ASP 172 LYS 173 ALA 174 THR 175 ILE 176 GLY 177 PHE 178 GLU 179 VAL 180 GLN 181 GLU 182 GLU 183 GLY 184 TYR 185 LEU 186 ALA 187 LYS 188 ILE 189 LEU 190 VAL 191 PRO 192 GLU 193 GLY 194 THR 195 ARG 196 ASP 197 VAL 198 PRO 199 LEU 200 GLY 201 THR 202 PRO 203 LEU 204 CYS 205 ILE 206 ILE 207 VAL 208 GLU 209 LYS 210 GLU 211 ALA 212 ASP 213 ILE 214 SER 215 ALA 216 PHE 217 ALA 218 ASP 219 TYR 220 THR 226 ASP 227 LEU 228 LYS 229

Ligands

Unit 3	MG 501 K 502 K 503 ATP 504
Unit 4	RED 373