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Sequence, Chains, Asymmetric and Biological Units

Title DIMERIC PARALLEL-STRANDED TETRAPLEX WITH 3+1 5' G-TETRAD INTERFACE, SINGLE-RESIDUE CHAIN REVERSAL LOOPS AND GAG TRIAD IN THE CONTEXT OF A(GGGG) PENTAD
Keywords DIMERIC PARALLEL-STRANDED QUADRUPLEX; DNA APTAMER;HIV-1 INTEGRASE INHIBITOR DESIGN; 3+1 G-TETRAD; SINGLE NUCLEOTIDE CHAIN REVERSAL LOOP; GAG TRIAD; (A)GGGG PENTAD
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1Y8D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   5'- D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*GP*T)-3'  A 16 523 0
2  Other macromolecule   5'- D(*GP*GP*GP*GP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*GP*T)-3'  B 16 523 0
total       32 1046 0

Other macromolecules
Unit 1 DG1 DG2 DG3 DG4 DT5 DG6 DG7 DG8 DA9 DG10 DG11 DA12 DG13 DG14 DG15 DT16
Unit 2 DG1 DG2 DG3 DG4 DT5 DG6 DG7 DG8 DA9 DG10 DG11 DA12 DG13 DG14 DG15 DT16

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany