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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CD1A IN COMPLEX WITH A SYNTHETIC MYCOBA LIPOPEPTIDE
Keywords BETA SHEET PLATFORM, MHC-FOLD, PROTEIN-LIPOPEPTIDE COMPLEX, SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XZ0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   T-CELL SURFACE GLYCOPROTEIN CD1A  A 271 2198 0
2  Protein   BETA-2-MICROGLOBULIN  B 98 820 0
3  Protein   T-CELL SURFACE GLYCOPROTEIN CD1A  C 270 2191 0
4  Protein   BETA-2-MICROGLOBULIN  D 98 820 0
5  Ligand    E 3 0 38
6  Ligand    F 2 0 24
7  Ligand   T-CELL SURFACE GLYCOPROTEIN CD1A  A 1 0 58
8  Ligand   T-CELL SURFACE GLYCOPROTEIN CD1A  C 1 0 41
9 Water     19 0 19
total       763 6029 180

Proteins
Unit 1 PRO7 LEU8 SER9 PHE10 HIS11 VAL12 ILE13 TRP14 ILE15 ALA16 SER17 PHE18 TYR19 ASN20 HIS21 SER22 TRP23 LYS24 GLN25 ASN26 LEU27 VAL28 SER29 GLY30 TRP31 LEU32 SER33 ASP34 LEU35 GLN36 THR37 HIS38 THR39 TRP40 ASP41 SER42 ASN43 SER44 SER45 THR46 ILE47 VAL48 PHE49 LEU50 TRP51 PRO52 TRP53 SER54 ARG55 GLY56 ASN57 PHE58 SER59 ASN60 GLU61 GLU62 TRP63 LYS64 GLU65 LEU66 GLU67 THR68 LEU69 PHE70 ARG71 ILE72 ARG73 THR74 ILE75 ARG76 SER77 PHE78 GLU79 GLY80 ILE81 ARG82 ARG83 TYR84 ALA85 HIS86 GLU87 LEU88 GLN89 PHE90 GLU91 TYR92 PRO93 PHE94 GLU95 ILE96 GLN97 VAL98 THR99 GLY100 GLY101 CYS102 GLU103 LEU104 HIS105 SER106 GLY107 LYS108 VAL109 SER110 GLY111 SER112 PHE113 LEU114 GLN115 LEU116 ALA117 TYR118 GLN119 GLY120 SER121 ASP122 PHE123 VAL124 SER125 PHE126 GLN127 ASN128 ASN129 SER130 TRP131 LEU132 PRO133 TYR134 PRO135 VAL136 ALA137 GLY138 ASN139 MET140 ALA141 LYS142 HIS143 PHE144 CYS145 LYS146 VAL147 LEU148 ASN149 GLN150 ASN151 GLN152 HIS153 GLU154 ASN155 ASP156 ILE157 THR158 HIS159 ASN160 LEU161 LEU162 SER163 ASP164 THR165 CYS166 PRO167 ARG168 PHE169 ILE170 LEU171 GLY172 LEU173 LEU174 ASP175 ALA176 GLY177 LYS178 ALA179 HIS180 LEU181 GLN182 ARG183 GLN184 VAL185 LYS186 PRO187 GLU188 ALA189 TRP190 LEU191 SER192 HIS193 GLY194 PRO195 SER196 PRO197 GLY198 PRO199 GLY200 HIS201 LEU202 GLN203 LEU204 VAL205 CYS206 HIS207 VAL208 SER209 GLY210 PHE211 TYR212 PRO213 LYS214 PRO215 VAL216 TRP217 VAL218 MET219 TRP220 MET221 ARG222 GLY223 GLU224 GLN225 GLU226 GLN227 GLN228 GLY229 THR230 GLN231 ARG232 GLY233 ASP234 ILE235 LEU236 PRO237 SER238 ALA239 ASP240 GLY241 THR242 TRP243 TYR244 LEU245 ARG246 ALA247 THR248 LEU249 GLU250 VAL251 ALA252 ALA253 GLY254 GLU255 ALA256 ALA257 ASP258 LEU259 SER260 CYS261 ARG262 VAL263 LYS264 HIS265 SER266 SER267 LEU268 GLU269 GLY270 GLN271 ASP272 ILE273 VAL274 LEU275 TYR276 TRP277
Unit 2 ILE1 GLN2 ARG3 THR4 PRO5 LYS6 ILE7 GLN8 VAL9 TYR10 SER11 ARG12 HIS13 PRO14 ALA15 GLU16 ASN17 GLY18 LYS19 SER20 ASN21 PHE22 LEU23 ASN24 CYS25 TYR26 VAL27 SER28 GLY29 PHE30 HIS31 PRO32 SER33 ASP34 ILE35 GLU36 VAL37 ASP38 LEU39 LEU40 LYS41 ASN42 GLY43 GLU44 ARG45 ILE46 GLU47 LYS48 VAL49 GLU50 HIS51 SER52 ASP53 LEU54 SER55 PHE56 SER57 LYS58 ASP59 TRP60 SER61 PHE62 TYR63 LEU64 LEU65 TYR66 TYR67 THR68 GLU69 PHE70 THR71 PRO72 THR73 GLU74 LYS75 ASP76 GLU77 TYR78 ALA79 CYS80 ARG81 VAL82 ASN83 HIS84 VAL85 THR86 LEU87 SER88 GLN89 PRO90 LYS91 ILE92 VAL93 LYS94 TRP95 ASP96 ARG97 ASP98
Unit 3 LEU8 SER9 PHE10 HIS11 VAL12 ILE13 TRP14 ILE15 ALA16 SER17 PHE18 TYR19 ASN20 HIS21 SER22 TRP23 LYS24 GLN25 ASN26 LEU27 VAL28 SER29 GLY30 TRP31 LEU32 SER33 ASP34 LEU35 GLN36 THR37 HIS38 THR39 TRP40 ASP41 SER42 ASN43 SER44 SER45 THR46 ILE47 VAL48 PHE49 LEU50 TRP51 PRO52 TRP53 SER54 ARG55 GLY56 ASN57 PHE58 SER59 ASN60 GLU61 GLU62 TRP63 LYS64 GLU65 LEU66 GLU67 THR68 LEU69 PHE70 ARG71 ILE72 ARG73 THR74 ILE75 ARG76 SER77 PHE78 GLU79 GLY80 ILE81 ARG82 ARG83 TYR84 ALA85 HIS86 GLU87 LEU88 GLN89 PHE90 GLU91 TYR92 PRO93 PHE94 GLU95 ILE96 GLN97 VAL98 THR99 GLY100 GLY101 CYS102 GLU103 LEU104 HIS105 SER106 GLY107 LYS108 VAL109 SER110 GLY111 SER112 PHE113 LEU114 GLN115 LEU116 ALA117 TYR118 GLN119 GLY120 SER121 ASP122 PHE123 VAL124 SER125 PHE126 GLN127 ASN128 ASN129 SER130 TRP131 LEU132 PRO133 TYR134 PRO135 VAL136 ALA137 GLY138 ASN139 MET140 ALA141 LYS142 HIS143 PHE144 CYS145 LYS146 VAL147 LEU148 ASN149 GLN150 ASN151 GLN152 HIS153 GLU154 ASN155 ASP156 ILE157 THR158 HIS159 ASN160 LEU161 LEU162 SER163 ASP164 THR165 CYS166 PRO167 ARG168 PHE169 ILE170 LEU171 GLY172 LEU173 LEU174 ASP175 ALA176 GLY177 LYS178 ALA179 HIS180 LEU181 GLN182 ARG183 GLN184 VAL185 LYS186 PRO187 GLU188 ALA189 TRP190 LEU191 SER192 HIS193 GLY194 PRO195 SER196 PRO197 GLY198 PRO199 GLY200 HIS201 LEU202 GLN203 LEU204 VAL205 CYS206 HIS207 VAL208 SER209 GLY210 PHE211 TYR212 PRO213 LYS214 PRO215 VAL216 TRP217 VAL218 MET219 TRP220 MET221 ARG222 GLY223 GLU224 GLN225 GLU226 GLN227 GLN228 GLY229 THR230 GLN231 ARG232 GLY233 ASP234 ILE235 LEU236 PRO237 SER238 ALA239 ASP240 GLY241 THR242 TRP243 TYR244 LEU245 ARG246 ALA247 THR248 LEU249 GLU250 VAL251 ALA252 ALA253 GLY254 GLU255 ALA256 ALA257 ASP258 LEU259 SER260 CYS261 ARG262 VAL263 LYS264 HIS265 SER266 SER267 LEU268 GLU269 GLY270 GLN271 ASP272 ILE273 VAL274 LEU275 TYR276 TRP277
Unit 4 ILE1 GLN2 ARG3 THR4 PRO5 LYS6 ILE7 GLN8 VAL9 TYR10 SER11 ARG12 HIS13 PRO14 ALA15 GLU16 ASN17 GLY18 LYS19 SER20 ASN21 PHE22 LEU23 ASN24 CYS25 TYR26 VAL27 SER28 GLY29 PHE30 HIS31 PRO32 SER33 ASP34 ILE35 GLU36 VAL37 ASP38 LEU39 LEU40 LYS41 ASN42 GLY43 GLU44 ARG45 ILE46 GLU47 LYS48 VAL49 GLU50 HIS51 SER52 ASP53 LEU54 SER55 PHE56 SER57 LYS58 ASP59 TRP60 SER61 PHE62 TYR63 LEU64 LEU65 TYR66 TYR67 THR68 GLU69 PHE70 THR71 PRO72 THR73 GLU74 LYS75 ASP76 GLU77 TYR78 ALA79 CYS80 ARG81 VAL82 ASN83 HIS84 VAL85 THR86 LEU87 SER88 GLN89 PRO90 LYS91 ILE92 VAL93 LYS94 TRP95 ASP96 ARG97 ASP98

Ligands
Unit 5 NAG1 NAG2 FUC3
Unit 6 NAG1 FUC2
Unit 7 JH0601
Unit 8 JH0602

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany