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Title | X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBS COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR M MOVEMENT DURING CATALYSIS | |
Keywords | ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE), ISOMERASE, OXIDORE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1XYA | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | XYLOSE ISOMERASE | A | 386 | 3024 | 0 |
2 | Protein | XYLOSE ISOMERASE | B | 386 | 3024 | 0 |
3 | Ligand | XYLOSE ISOMERASE | A | 3 | 0 | 3 |
4 | Ligand | XYLOSE ISOMERASE | B | 3 | 0 | 3 |
5 | Water | 496 | 0 | 496 | ||
total | 1274 | 6048 | 502 |
Unit 1 | SER1 TYR2 GLN3 PRO4 THR5 PRO6 GLU7 ASP8 ARG9 PHE10 THR11 PHE12 GLY13 LEU14 TRP15 THR16 VAL17 GLY18 TRP19 GLN20 GLY21 ARG22 ASP23 PRO24 PHE25 GLY26 ASP27 ALA28 THR29 ARG30 PRO31 ALA32 LEU33 ASP34 PRO35 VAL36 GLU37 THR38 VAL39 GLN40 ARG41 LEU42 ALA43 GLU44 LEU45 GLY46 ALA47 HIS48 GLY49 VAL50 THR51 PHE52 HIS53 ASP54 ASP55 ASP56 LEU57 ILE58 PRO59 PHE60 GLY61 SER62 SER63 ASP64 THR65 GLU66 ARG67 GLU68 SER69 HIS70 ILE71 LYS72 ARG73 PHE74 ARG75 GLN76 ALA77 LEU78 ASP79 ALA80 THR81 GLY82 MET83 THR84 VAL85 PRO86 MET87 ALA88 THR89 THR90 ASN91 LEU92 PHE93 THR94 HIS95 PRO96 VAL97 PHE98 LYS99 ASP100 GLY101 GLY102 PHE103 THR104 ALA105 ASN106 ASP107 ARG108 ASP109 VAL110 ARG111 ARG112 TYR113 ALA114 LEU115 ARG116 LYS117 THR118 ILE119 ARG120 ASN121 ILE122 ASP123 LEU124 ALA125 VAL126 GLU127 LEU128 GLY129 ALA130 LYS131 THR132 TYR133 VAL134 ALA135 TRP136 GLY137 GLY138 ARG139 GLU140 GLY141 ALA142 GLU143 SER144 GLY145 ALA146 ALA147 LYS148 ASP149 VAL150 ARG151 VAL152 ALA153 LEU154 ASP155 ARG156 MET157 LYS158 GLU159 ALA160 PHE161 ASP162 LEU163 LEU164 GLY165 GLU166 TYR167 VAL168 THR169 SER170 GLN171 GLY172 TYR173 ASP174 THR175 ARG176 PHE177 ALA178 ILE179 GLU180 PRO181 LYS182 PRO183 ASN184 GLU185 PRO186 ARG187 GLY188 ASP189 ILE190 LEU191 LEU192 PRO193 THR194 VAL195 GLY196 HIS197 ALA198 LEU199 ALA200 PHE201 ILE202 GLU203 ARG204 LEU205 GLU206 ARG207 PRO208 GLU209 LEU210 TYR211 GLY212 VAL213 ASN214 PRO215 GLU216 VAL217 GLY218 HIS219 GLU220 GLN221 MET222 ALA223 GLY224 LEU225 ASN226 PHE227 PRO228 HIS229 GLY230 ILE231 ALA232 GLN233 ALA234 LEU235 TRP236 ALA237 GLY238 LYS239 LEU240 PHE241 HIS242 ILE243 ASP244 LEU245 ASN246 GLY247 GLN248 SER249 GLY250 ILE251 LYS252 TYR253 ASP254 GLN255 ASP256 LEU257 ARG258 PHE259 GLY260 ALA261 GLY262 ASP263 LEU264 ARG265 ALA266 ALA267 PHE268 TRP269 LEU270 VAL271 ASP272 LEU273 LEU274 GLU275 SER276 ALA277 GLY278 TYR279 GLU280 GLY281 PRO282 ARG283 HIS284 PHE285 ASP286 PHE287 LYS288 PRO289 PRO290 ARG291 THR292 GLU293 ASP294 ILE295 ASP296 GLY297 VAL298 TRP299 ALA300 SER301 ALA302 ALA303 GLY304 CYS305 MET306 ARG307 ASN308 TYR309 LEU310 ILE311 LEU312 LYS313 GLU314 ARG315 ALA316 ALA317 ALA318 PHE319 ARG320 ALA321 ASP322 PRO323 GLU324 VAL325 GLN326 GLU327 ALA328 LEU329 ARG330 ALA331 SER332 ARG333 LEU334 ASP335 GLU336 LEU337 ALA338 GLN339 PRO340 THR341 ALA342 ALA343 ASP344 GLY345 VAL346 GLN347 GLU348 LEU349 LEU350 ALA351 ASP352 ARG353 THR354 ALA355 PHE356 GLU357 ASP358 PHE359 ASP360 VAL361 ASP362 ALA363 ALA364 ALA365 ALA366 ARG367 GLY368 MET369 ALA370 PHE371 GLU372 ARG373 LEU374 ASP375 GLN376 LEU377 ALA378 MET379 ASP380 HIS381 LEU382 LEU383 GLY384 ALA385 ARG386 |
Unit 2 | SER501 TYR502 GLN503 PRO504 THR505 PRO506 GLU507 ASP508 ARG509 PHE510 THR511 PHE512 GLY513 LEU514 TRP515 THR516 VAL517 GLY518 TRP519 GLN520 GLY521 ARG522 ASP523 PRO524 PHE525 GLY526 ASP527 ALA528 THR529 ARG530 PRO531 ALA532 LEU533 ASP534 PRO535 VAL536 GLU537 THR538 VAL539 GLN540 ARG541 LEU542 ALA543 GLU544 LEU545 GLY546 ALA547 HIS548 GLY549 VAL550 THR551 PHE552 HIS553 ASP554 ASP555 ASP556 LEU557 ILE558 PRO559 PHE560 GLY561 SER562 SER563 ASP564 THR565 GLU566 ARG567 GLU568 SER569 HIS570 ILE571 LYS572 ARG573 PHE574 ARG575 GLN576 ALA577 LEU578 ASP579 ALA580 THR581 GLY582 MET583 THR584 VAL585 PRO586 MET587 ALA588 THR589 THR590 ASN591 LEU592 PHE593 THR594 HIS595 PRO596 VAL597 PHE598 LYS599 ASP600 GLY601 GLY602 PHE603 THR604 ALA605 ASN606 ASP607 ARG608 ASP609 VAL610 ARG611 ARG612 TYR613 ALA614 LEU615 ARG616 LYS617 THR618 ILE619 ARG620 ASN621 ILE622 ASP623 LEU624 ALA625 VAL626 GLU627 LEU628 GLY629 ALA630 LYS631 THR632 TYR633 VAL634 ALA635 TRP636 GLY637 GLY638 ARG639 GLU640 GLY641 ALA642 GLU643 SER644 GLY645 ALA646 ALA647 LYS648 ASP649 VAL650 ARG651 VAL652 ALA653 LEU654 ASP655 ARG656 MET657 LYS658 GLU659 ALA660 PHE661 ASP662 LEU663 LEU664 GLY665 GLU666 TYR667 VAL668 THR669 SER670 GLN671 GLY672 TYR673 ASP674 THR675 ARG676 PHE677 ALA678 ILE679 GLU680 PRO681 LYS682 PRO683 ASN684 GLU685 PRO686 ARG687 GLY688 ASP689 ILE690 LEU691 LEU692 PRO693 THR694 VAL695 GLY696 HIS697 ALA698 LEU699 ALA700 PHE701 ILE702 GLU703 ARG704 LEU705 GLU706 ARG707 PRO708 GLU709 LEU710 TYR711 GLY712 VAL713 ASN714 PRO715 GLU716 VAL717 GLY718 HIS719 GLU720 GLN721 MET722 ALA723 GLY724 LEU725 ASN726 PHE727 PRO728 HIS729 GLY730 ILE731 ALA732 GLN733 ALA734 LEU735 TRP736 ALA737 GLY738 LYS739 LEU740 PHE741 HIS742 ILE743 ASP744 LEU745 ASN746 GLY747 GLN748 SER749 GLY750 ILE751 LYS752 TYR753 ASP754 GLN755 ASP756 LEU757 ARG758 PHE759 GLY760 ALA761 GLY762 ASP763 LEU764 ARG765 ALA766 ALA767 PHE768 TRP769 LEU770 VAL771 ASP772 LEU773 LEU774 GLU775 SER776 ALA777 GLY778 TYR779 GLU780 GLY781 PRO782 ARG783 HIS784 PHE785 ASP786 PHE787 LYS788 PRO789 PRO790 ARG791 THR792 GLU793 ASP794 ILE795 ASP796 GLY797 VAL798 TRP799 ALA800 SER801 ALA802 ALA803 GLY804 CYS805 MET806 ARG807 ASN808 TYR809 LEU810 ILE811 LEU812 LYS813 GLU814 ARG815 ALA816 ALA817 ALA818 PHE819 ARG820 ALA821 ASP822 PRO823 GLU824 VAL825 GLN826 GLU827 ALA828 LEU829 ARG830 ALA831 SER832 ARG833 LEU834 ASP835 GLU836 LEU837 ALA838 GLN839 PRO840 THR841 ALA842 ALA843 ASP844 GLY845 VAL846 GLN847 GLU848 LEU849 LEU850 ALA851 ASP852 ARG853 THR854 ALA855 PHE856 GLU857 ASP858 PHE859 ASP860 VAL861 ASP862 ALA863 ALA864 ALA865 ALA866 ARG867 GLY868 MET869 ALA870 PHE871 GLU872 ARG873 LEU874 ASP875 GLN876 LEU877 ALA878 MET879 ASP880 HIS881 LEU882 LEU883 GLY884 ALA885 ARG886 |
Unit 3 | MG400 MG401 OH1700 |
Unit 4 | MG900 MG901 OH1800 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |