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Sequence, Chains, Asymmetric and Biological Units

Title DCTP DEAMINASE FROM ESCHERICHIA COLI. E138A MUTANT ENZYME IN COMPLEX WITH DUTP
Keywords DCTP DEAMINASE, NUCLEOTIDE METABOLISM, TRIMER, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XS6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  A 193 1492 0
2  Protein   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  B 193 1492 0
3  Protein   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  C 193 1492 0
4  Protein   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  D 193 1492 0
5  Protein   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  E 193 1492 0
6  Protein   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  F 193 1492 0
7  Ligand   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  A 2 0 29
8  Ligand   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  B 2 0 29
9  Ligand   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  C 2 0 29
10  Ligand   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  D 3 0 30
11  Ligand   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  E 2 0 29
12  Ligand   DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE  F 2 0 29
13 Water     391 0 391
total       1562 8952 566

Proteins
Unit 1 MET1 ARG2 LEU3 CYS4 ASP5 ARG6 ASP7 ILE8 GLU9 ALA10 TRP11 LEU12 ASP13 GLU14 GLY15 ARG16 LEU17 SER18 ILE19 ASN20 PRO21 ARG22 PRO23 PRO24 VAL25 GLU26 ARG27 ILE28 ASN29 GLY30 ALA31 THR32 VAL33 ASP34 VAL35 ARG36 LEU37 GLY38 ASN39 LYS40 PHE41 ARG42 THR43 PHE44 ARG45 GLY46 HIS47 THR48 ALA49 ALA50 PHE51 ILE52 ASP53 LEU54 SER55 GLY56 PRO57 LYS58 ASP59 GLU60 VAL61 SER62 ALA63 ALA64 LEU65 ASP66 ARG67 VAL68 MET69 SER70 ASP71 GLU72 ILE73 VAL74 LEU75 ASP76 GLU77 GLY78 GLU79 ALA80 PHE81 TYR82 LEU83 HIS84 PRO85 GLY86 GLU87 LEU88 ALA89 LEU90 ALA91 VAL92 THR93 LEU94 GLU95 SER96 VAL97 THR98 LEU99 PRO100 ALA101 ASP102 LEU103 VAL104 GLY105 TRP106 LEU107 ASP108 GLY109 ARG110 SER111 SER112 LEU113 ALA114 ARG115 LEU116 GLY117 LEU118 MET119 VAL120 HIS121 VAL122 THR123 ALA124 HIS125 ARG126 ILE127 ASP128 PRO129 GLY130 TRP131 SER132 GLY133 CYS134 ILE135 VAL136 LEU137 ALA138 PHE139 TYR140 ASN141 SER142 GLY143 LYS144 LEU145 PRO146 LEU147 ALA148 LEU149 ARG150 PRO151 GLY152 MET153 LEU154 ILE155 GLY156 ALA157 LEU158 SER159 PHE160 GLU161 PRO162 LEU163 SER164 GLY165 PRO166 ALA167 VAL168 ARG169 PRO170 TYR171 ASN172 ARG173 ARG174 GLU175 ASP176 ALA177 LYS178 TYR179 ARG180 ASN181 GLN182 GLN183 GLY184 ALA185 VAL186 ALA187 SER188 ARG189 ILE190 ASP191 LYS192 ASP193
Unit 2 MET1 ARG2 LEU3 CYS4 ASP5 ARG6 ASP7 ILE8 GLU9 ALA10 TRP11 LEU12 ASP13 GLU14 GLY15 ARG16 LEU17 SER18 ILE19 ASN20 PRO21 ARG22 PRO23 PRO24 VAL25 GLU26 ARG27 ILE28 ASN29 GLY30 ALA31 THR32 VAL33 ASP34 VAL35 ARG36 LEU37 GLY38 ASN39 LYS40 PHE41 ARG42 THR43 PHE44 ARG45 GLY46 HIS47 THR48 ALA49 ALA50 PHE51 ILE52 ASP53 LEU54 SER55 GLY56 PRO57 LYS58 ASP59 GLU60 VAL61 SER62 ALA63 ALA64 LEU65 ASP66 ARG67 VAL68 MET69 SER70 ASP71 GLU72 ILE73 VAL74 LEU75 ASP76 GLU77 GLY78 GLU79 ALA80 PHE81 TYR82 LEU83 HIS84 PRO85 GLY86 GLU87 LEU88 ALA89 LEU90 ALA91 VAL92 THR93 LEU94 GLU95 SER96 VAL97 THR98 LEU99 PRO100 ALA101 ASP102 LEU103 VAL104 GLY105 TRP106 LEU107 ASP108 GLY109 ARG110 SER111 SER112 LEU113 ALA114 ARG115 LEU116 GLY117 LEU118 MET119 VAL120 HIS121 VAL122 THR123 ALA124 HIS125 ARG126 ILE127 ASP128 PRO129 GLY130 TRP131 SER132 GLY133 CYS134 ILE135 VAL136 LEU137 ALA138 PHE139 TYR140 ASN141 SER142 GLY143 LYS144 LEU145 PRO146 LEU147 ALA148 LEU149 ARG150 PRO151 GLY152 MET153 LEU154 ILE155 GLY156 ALA157 LEU158 SER159 PHE160 GLU161 PRO162 LEU163 SER164 GLY165 PRO166 ALA167 VAL168 ARG169 PRO170 TYR171 ASN172 ARG173 ARG174 GLU175 ASP176 ALA177 LYS178 TYR179 ARG180 ASN181 GLN182 GLN183 GLY184 ALA185 VAL186 ALA187 SER188 ARG189 ILE190 ASP191 LYS192 ASP193
Unit 3 MET1 ARG2 LEU3 CYS4 ASP5 ARG6 ASP7 ILE8 GLU9 ALA10 TRP11 LEU12 ASP13 GLU14 GLY15 ARG16 LEU17 SER18 ILE19 ASN20 PRO21 ARG22 PRO23 PRO24 VAL25 GLU26 ARG27 ILE28 ASN29 GLY30 ALA31 THR32 VAL33 ASP34 VAL35 ARG36 LEU37 GLY38 ASN39 LYS40 PHE41 ARG42 THR43 PHE44 ARG45 GLY46 HIS47 THR48 ALA49 ALA50 PHE51 ILE52 ASP53 LEU54 SER55 GLY56 PRO57 LYS58 ASP59 GLU60 VAL61 SER62 ALA63 ALA64 LEU65 ASP66 ARG67 VAL68 MET69 SER70 ASP71 GLU72 ILE73 VAL74 LEU75 ASP76 GLU77 GLY78 GLU79 ALA80 PHE81 TYR82 LEU83 HIS84 PRO85 GLY86 GLU87 LEU88 ALA89 LEU90 ALA91 VAL92 THR93 LEU94 GLU95 SER96 VAL97 THR98 LEU99 PRO100 ALA101 ASP102 LEU103 VAL104 GLY105 TRP106 LEU107 ASP108 GLY109 ARG110 SER111 SER112 LEU113 ALA114 ARG115 LEU116 GLY117 LEU118 MET119 VAL120 HIS121 VAL122 THR123 ALA124 HIS125 ARG126 ILE127 ASP128 PRO129 GLY130 TRP131 SER132 GLY133 CYS134 ILE135 VAL136 LEU137 ALA138 PHE139 TYR140 ASN141 SER142 GLY143 LYS144 LEU145 PRO146 LEU147 ALA148 LEU149 ARG150 PRO151 GLY152 MET153 LEU154 ILE155 GLY156 ALA157 LEU158 SER159 PHE160 GLU161 PRO162 LEU163 SER164 GLY165 PRO166 ALA167 VAL168 ARG169 PRO170 TYR171 ASN172 ARG173 ARG174 GLU175 ASP176 ALA177 LYS178 TYR179 ARG180 ASN181 GLN182 GLN183 GLY184 ALA185 VAL186 ALA187 SER188 ARG189 ILE190 ASP191 LYS192 ASP193
Unit 4 MET1 ARG2 LEU3 CYS4 ASP5 ARG6 ASP7 ILE8 GLU9 ALA10 TRP11 LEU12 ASP13 GLU14 GLY15 ARG16 LEU17 SER18 ILE19 ASN20 PRO21 ARG22 PRO23 PRO24 VAL25 GLU26 ARG27 ILE28 ASN29 GLY30 ALA31 THR32 VAL33 ASP34 VAL35 ARG36 LEU37 GLY38 ASN39 LYS40 PHE41 ARG42 THR43 PHE44 ARG45 GLY46 HIS47 THR48 ALA49 ALA50 PHE51 ILE52 ASP53 LEU54 SER55 GLY56 PRO57 LYS58 ASP59 GLU60 VAL61 SER62 ALA63 ALA64 LEU65 ASP66 ARG67 VAL68 MET69 SER70 ASP71 GLU72 ILE73 VAL74 LEU75 ASP76 GLU77 GLY78 GLU79 ALA80 PHE81 TYR82 LEU83 HIS84 PRO85 GLY86 GLU87 LEU88 ALA89 LEU90 ALA91 VAL92 THR93 LEU94 GLU95 SER96 VAL97 THR98 LEU99 PRO100 ALA101 ASP102 LEU103 VAL104 GLY105 TRP106 LEU107 ASP108 GLY109 ARG110 SER111 SER112 LEU113 ALA114 ARG115 LEU116 GLY117 LEU118 MET119 VAL120 HIS121 VAL122 THR123 ALA124 HIS125 ARG126 ILE127 ASP128 PRO129 GLY130 TRP131 SER132 GLY133 CYS134 ILE135 VAL136 LEU137 ALA138 PHE139 TYR140 ASN141 SER142 GLY143 LYS144 LEU145 PRO146 LEU147 ALA148 LEU149 ARG150 PRO151 GLY152 MET153 LEU154 ILE155 GLY156 ALA157 LEU158 SER159 PHE160 GLU161 PRO162 LEU163 SER164 GLY165 PRO166 ALA167 VAL168 ARG169 PRO170 TYR171 ASN172 ARG173 ARG174 GLU175 ASP176 ALA177 LYS178 TYR179 ARG180 ASN181 GLN182 GLN183 GLY184 ALA185 VAL186 ALA187 SER188 ARG189 ILE190 ASP191 LYS192 ASP193
Unit 5 MET1 ARG2 LEU3 CYS4 ASP5 ARG6 ASP7 ILE8 GLU9 ALA10 TRP11 LEU12 ASP13 GLU14 GLY15 ARG16 LEU17 SER18 ILE19 ASN20 PRO21 ARG22 PRO23 PRO24 VAL25 GLU26 ARG27 ILE28 ASN29 GLY30 ALA31 THR32 VAL33 ASP34 VAL35 ARG36 LEU37 GLY38 ASN39 LYS40 PHE41 ARG42 THR43 PHE44 ARG45 GLY46 HIS47 THR48 ALA49 ALA50 PHE51 ILE52 ASP53 LEU54 SER55 GLY56 PRO57 LYS58 ASP59 GLU60 VAL61 SER62 ALA63 ALA64 LEU65 ASP66 ARG67 VAL68 MET69 SER70 ASP71 GLU72 ILE73 VAL74 LEU75 ASP76 GLU77 GLY78 GLU79 ALA80 PHE81 TYR82 LEU83 HIS84 PRO85 GLY86 GLU87 LEU88 ALA89 LEU90 ALA91 VAL92 THR93 LEU94 GLU95 SER96 VAL97 THR98 LEU99 PRO100 ALA101 ASP102 LEU103 VAL104 GLY105 TRP106 LEU107 ASP108 GLY109 ARG110 SER111 SER112 LEU113 ALA114 ARG115 LEU116 GLY117 LEU118 MET119 VAL120 HIS121 VAL122 THR123 ALA124 HIS125 ARG126 ILE127 ASP128 PRO129 GLY130 TRP131 SER132 GLY133 CYS134 ILE135 VAL136 LEU137 ALA138 PHE139 TYR140 ASN141 SER142 GLY143 LYS144 LEU145 PRO146 LEU147 ALA148 LEU149 ARG150 PRO151 GLY152 MET153 LEU154 ILE155 GLY156 ALA157 LEU158 SER159 PHE160 GLU161 PRO162 LEU163 SER164 GLY165 PRO166 ALA167 VAL168 ARG169 PRO170 TYR171 ASN172 ARG173 ARG174 GLU175 ASP176 ALA177 LYS178 TYR179 ARG180 ASN181 GLN182 GLN183 GLY184 ALA185 VAL186 ALA187 SER188 ARG189 ILE190 ASP191 LYS192 ASP193
Unit 6 MET1 ARG2 LEU3 CYS4 ASP5 ARG6 ASP7 ILE8 GLU9 ALA10 TRP11 LEU12 ASP13 GLU14 GLY15 ARG16 LEU17 SER18 ILE19 ASN20 PRO21 ARG22 PRO23 PRO24 VAL25 GLU26 ARG27 ILE28 ASN29 GLY30 ALA31 THR32 VAL33 ASP34 VAL35 ARG36 LEU37 GLY38 ASN39 LYS40 PHE41 ARG42 THR43 PHE44 ARG45 GLY46 HIS47 THR48 ALA49 ALA50 PHE51 ILE52 ASP53 LEU54 SER55 GLY56 PRO57 LYS58 ASP59 GLU60 VAL61 SER62 ALA63 ALA64 LEU65 ASP66 ARG67 VAL68 MET69 SER70 ASP71 GLU72 ILE73 VAL74 LEU75 ASP76 GLU77 GLY78 GLU79 ALA80 PHE81 TYR82 LEU83 HIS84 PRO85 GLY86 GLU87 LEU88 ALA89 LEU90 ALA91 VAL92 THR93 LEU94 GLU95 SER96 VAL97 THR98 LEU99 PRO100 ALA101 ASP102 LEU103 VAL104 GLY105 TRP106 LEU107 ASP108 GLY109 ARG110 SER111 SER112 LEU113 ALA114 ARG115 LEU116 GLY117 LEU118 MET119 VAL120 HIS121 VAL122 THR123 ALA124 HIS125 ARG126 ILE127 ASP128 PRO129 GLY130 TRP131 SER132 GLY133 CYS134 ILE135 VAL136 LEU137 ALA138 PHE139 TYR140 ASN141 SER142 GLY143 LYS144 LEU145 PRO146 LEU147 ALA148 LEU149 ARG150 PRO151 GLY152 MET153 LEU154 ILE155 GLY156 ALA157 LEU158 SER159 PHE160 GLU161 PRO162 LEU163 SER164 GLY165 PRO166 ALA167 VAL168 ARG169 PRO170 TYR171 ASN172 ARG173 ARG174 GLU175 ASP176 ALA177 LYS178 TYR179 ARG180 ASN181 GLN182 GLN183 GLY184 ALA185 VAL186 ALA187 SER188 ARG189 ILE190 ASP191 LYS192 ASP193

Ligands
Unit 7 DUT1194 MG2195
Unit 8 DUT2194 MG3195
Unit 9 MG1195 DUT3194
Unit 10 DUT4194 MG5195 MG5196
Unit 11 DUT5194 MG6195
Unit 12 MG4195 DUT6194

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany