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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LYSINE 5,6-AMINOMUTASE IN COMPLEX WITH COBALAMIN, AND 5'-DEOXYADENOSINE
Keywords TIM BARREL, ROSSMANN DOMAIN, PLP, COBALAMIN, B12, 5'-DEOXYAD RADICAL, MUTASE, ADENOSYLCOBALAMIN, CONFORMATIONAL CHANGE,
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1XRS     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   D-LYSINE 5,6-AMINOMUTASE ALPHA SUBUNIT  A 516 4022 0
2  Protein   D-LYSINE 5,6-AMINOMUTASE BETA SUBUNIT  B 212 1651 0
3  Ligand   D-LYSINE 5,6-AMINOMUTASE BETA SUBUNIT  B 3 0 124
total       731 5673 124
Proteins
Unit 1 MET1 GLU2 SER3 LYS4 LEU5 ASN6 LEU7 ASP8 PHE9 ASN10 LEU11 VAL12 GLU13 LYS14 ALA15 ARG16 ALA17 LYS18 ALA19 LYS20 ALA21 ILE22 ALA23 ILE24 ASP25 THR26 GLN27 GLU28 PHE29 ILE30 GLU31 LYS32 HIS33 THR34 THR35 VAL36 THR37 VAL38 GLU39 ARG40 ALA41 VAL42 CYS43 ARG44 LEU45 LEU46 GLY47 ILE48 ASP49 GLY50 VAL51 ASP52 THR53 ASP54 GLU55 VAL56 PRO57 LEU58 PRO59 ASN60 ILE61 VAL62 VAL63 ASP64 HIS65 ILE66 LYS67 GLU68 ASN69 ASN70 GLY71 LEU72 ASN73 LEU74 GLY75 ALA76 ALA77 MET78 TYR79 ILE80 ALA81 ASN82 ALA83 VAL84 LEU85 ASN86 THR87 GLY88 LYS89 THR90 PRO91 GLN92 GLU93 ILE94 ALA95 GLN96 ALA97 ILE98 SER99 ALA100 GLY101 GLU102 LEU103 ASP104 LEU105 THR106 LYS107 LEU108 PRO109 MET110 LYS111 ASP112 LEU113 PHE114 GLU115 VAL116 LYS117 THR118 LYS119 ALA120 LEU121 SER122 MET123 ALA124 LYS125 GLU126 THR127 VAL128 GLU129 LYS130 ILE131 LYS132 ASN133 ASN134 ARG135 SER136 ILE137 ARG138 GLU139 SER140 ARG141 PHE142 GLU143 GLU144 TYR145 GLY146 ASP147 LYS148 SER149 GLY150 PRO151 LEU152 LEU153 TYR154 VAL155 ILE156 VAL157 ALA158 THR159 GLY160 ASN161 ILE162 TYR163 GLU164 ASP165 ILE166 THR167 GLN168 ALA169 VAL170 ALA171 ALA172 ALA173 LYS174 GLN175 GLY176 ALA177 ASP178 VAL179 ILE180 ALA181 VAL182 ILE183 ARG184 THR185 THR186 GLY187 GLN188 SER189 LEU190 LEU191 ASP192 TYR193 VAL194 PRO195 TYR196 GLY197 ALA198 THR199 THR200 GLU201 GLY202 PHE203 GLY204 GLY205 THR206 TYR207 ALA208 THR209 GLN210 GLU211 ASN212 PHE213 ARG214 LEU215 MET216 ARG217 GLU218 ALA219 LEU220 ASP221 LYS222 VAL223 GLY224 ALA225 GLU226 VAL227 GLY228 LYS229 TYR230 ILE231 ARG232 LEU233 CYS234 ASN235 TYR236 CYS237 SER238 GLY239 LEU240 CYS241 MET242 PRO243 GLU244 ILE245 ALA246 ALA247 MET248 GLY249 ALA250 ILE251 GLU252 ARG253 LEU254 ASP255 VAL256 MET257 LEU258 ASN259 ASP260 ALA261 LEU262 TYR263 GLY264 ILE265 LEU266 PHE267 ARG268 ASP269 ILE270 ASN271 MET272 GLN273 ARG274 THR275 MET276 ILE277 ASP278 GLN279 ASN280 PHE281 SER282 ARG283 ILE284 ILE285 ASN286 GLY287 PHE288 ALA289 GLY290 VAL291 ILE292 ILE293 ASN294 THR295 GLY296 GLU297 ASP298 ASN299 TYR300 LEU301 THR302 THR303 ALA304 ASP305 ALA306 PHE307 GLU308 GLU309 ALA310 HIS311 THR312 VAL313 LEU314 ALA315 SER316 GLN317 PHE318 ILE319 ASN320 GLU321 GLN322 PHE323 ALA324 LEU325 LEU326 ALA327 GLY328 LEU329 PRO330 GLU331 GLU332 GLN333 MET334 GLY335 LEU336 GLY337 HIS338 ALA339 PHE340 GLU341 MET342 ASP343 PRO344 GLU345 LEU346 LYS347 ASN348 GLY349 PHE350 LEU351 TYR352 GLU353 LEU354 SER355 GLN356 ALA357 GLN358 MET359 ALA360 ARG361 GLU362 ILE363 PHE364 PRO365 LYS366 ALA367 PRO368 LEU369 LYS370 TYR371 MET372 PRO373 PRO374 THR375 LYS376 PHE377 MET378 THR379 GLY380 ASN381 ILE382 PHE383 LYS384 GLY385 HIS386 ILE387 GLN388 ASP389 ALA390 LEU391 PHE392 ASN393 MET394 VAL395 THR396 ILE397 MET398 THR399 ASN400 GLN401 ARG402 ILE403 HIS404 LEU405 LEU406 GLY407 MET408 LEU409 THR410 GLU411 ALA412 LEU413 HIS414 THR415 PRO416 PHE417 MET418 SER419 ASP420 ARG421 ALA422 LEU423 SER424 ILE425 GLU426 ASN427 ALA428 GLN429 TYR430 ILE431 PHE432 ASN433 ASN434 MET435 GLU436 SER437 ILE438 SER439 GLU440 GLU441 ILE442 GLN443 PHE444 LYS445 GLU446 ASP447 GLY448 LEU449 ILE450 GLN451 LYS452 ARG453 ALA454 GLY455 PHE456 VAL457 LEU458 GLU459 LYS460 ALA461 ASN462 GLU463 LEU464 LEU465 GLU466 GLU467 ILE468 GLU469 GLN470 LEU471 GLY472 LEU473 PHE474 ASP475 THR476 LEU477 GLU478 LYS479 GLY480 ILE481 PHE482 GLY483 GLY484 VAL485 LYS486 ARG487 PRO488 LYS489 ASP490 GLY491 GLY492 LYS493 GLY494 LEU495 ASN496 GLY497 VAL498 VAL499 SER500 LYS501 ASP502 GLU503 ASN504 TYR505 TYR506 ASN507 PRO508 PHE509 VAL510 GLU511 LEU512 MET513 LEU514 ASN515 LYS516
Unit 2 LYS33 VAL34 GLN35 LEU36 SER37 PHE38 THR39 LEU40 PRO41 LEU42 LYS43 ASN44 ASN45 GLU46 ARG47 SER48 ALA49 GLU50 ALA51 ALA52 LYS53 GLN54 ILE55 ALA56 LEU57 LYS58 MET59 GLY60 LEU61 GLU62 GLU63 PRO64 SER65 VAL66 VAL67 MET68 GLN69 GLN70 SER71 LEU72 ASP73 GLU74 GLU75 PHE76 THR77 PHE78 PHE79 VAL80 VAL81 TYR82 GLY83 ASN84 GLU102 ILE103 LEU104 SER105 MET106 GLU107 GLU108 THR109 ASP110 GLU111 TYR112 ILE113 LYS114 GLU115 ASN116 ILE117 GLY118 ARG119 LYS120 ILE121 VAL122 VAL123 VAL124 GLY125 ALA126 SER127 THR128 GLY129 THR130 ASP131 ALA132 HIS133 THR134 VAL135 GLY136 ILE137 ASP138 ALA139 ILE140 MET141 ASN142 MET143 LYS144 GLY145 TYR146 ALA147 GLY148 HIS149 TYR150 GLY151 LEU152 GLU153 ARG154 TYR155 GLU156 MET157 ILE158 ASP159 ALA160 TYR161 ASN162 LEU163 GLY164 SER165 GLN166 VAL167 ALA168 ASN169 GLU170 ASP171 PHE172 ILE173 LYS174 LYS175 ALA176 VAL177 GLU178 LEU179 GLU180 ALA181 ASP182 VAL183 LEU184 LEU185 VAL186 SER187 GLN188 THR189 VAL190 THR191 GLN192 LYS193 ASN194 VAL195 HIS196 ILE197 GLN198 ASN199 MET200 THR201 HIS202 LEU203 ILE204 GLU205 LEU206 LEU207 GLU208 ALA209 GLU210 GLY211 LEU212 ARG213 ASP214 ARG215 PHE216 VAL217 LEU218 LEU219 CYS220 GLY221 GLY222 PRO223 ARG224 ILE225 ASN226 ASN227 GLU228 ILE229 ALA230 LYS231 GLU232 LEU233 GLY234 TYR235 ASP236 ALA237 GLY238 PHE239 GLY240 PRO241 GLY242 ARG243 PHE244 ALA245 ASP246 ASP247 VAL248 ALA249 THR250 PHE251 ALA252 VAL253 LYS254 THR255 LEU256 ASN257 ASP258 ARG259 MET260 ASN261
Ligands
Unit 3 5AD500 B12800 PLP801
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany