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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE ANALYSIS OF AN NDP KINASE FROM PYROBACULUM AEROPHILUM
Keywords ALPHA/BETA SANDWICH, FERREDOXIN FOLD, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XQI     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  A 182 1390 24
2  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  B 182 1390 24
3  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  C 182 1390 24
4  Ligand   NUCLEOSIDE DIPHOSPHATE KINASE  A 2 0 18
5  Ligand   NUCLEOSIDE DIPHOSPHATE KINASE  B 2 0 18
6  Ligand   NUCLEOSIDE DIPHOSPHATE KINASE  C 2 0 18
7 Water     158 0 158
total       710 4170 284

Proteins
Unit 1 PRO14 VAL15 GLU16 LYS17 THR18 LEU19 LEU20 ILE21 LEU22 LYS23 PRO24 ASP25 ALA26 VAL27 ALA28 ARG29 GLY30 LEU31 VAL32 ASP33 GLU34 ILE35 ILE36 SER37 ARG38 PHE39 LYS40 LYS41 ALA42 GLY43 LEU44 LYS45 ILE46 VAL47 ALA48 LEU49 LYS50 MSE51 VAL52 LYS53 ALA54 SER55 PRO56 GLU57 GLU58 ILE59 GLU60 ARG61 PHE62 TYR63 PRO64 SER65 SER66 GLU67 GLU68 TRP69 LEU70 GLN71 SER72 ALA73 GLY74 GLN75 LYS76 LEU77 LEU78 LYS79 ALA80 TYR81 GLN82 GLU83 LEU84 GLY85 ILE86 ASP87 PRO88 ARG89 ALA90 LYS91 ILE92 GLY93 THR94 ASP95 ASP96 PRO97 VAL98 GLU99 VAL100 GLY101 ARG102 ILE103 ILE104 LYS105 ARG106 ASN107 LEU108 VAL109 LYS110 TYR111 MSE112 THR113 SER114 GLY115 PRO116 ASN117 VAL118 VAL119 MSE120 VAL121 LEU122 LYS123 GLY124 ASN125 ARG126 ALA127 VAL128 GLU129 ILE130 VAL131 ARG132 LYS133 LEU134 VAL135 GLY136 PRO137 THR138 SER139 PRO140 HIS141 SER142 ALA143 PRO144 PRO145 GLY146 THR147 ILE148 ARG149 GLY150 ASP151 TYR152 SER153 ILE154 ASP155 SER156 PRO157 ASP158 LEU159 ALA160 ALA161 GLU162 GLU163 GLY164 ARG165 VAL166 VAL167 PHE168 ASN169 LEU170 VAL171 HIS172 ALA173 SER174 ASP175 SER176 PRO177 SER178 GLU179 ALA180 GLU181 ARG182 GLU183 ILE184 ARG185 PHE186 TRP187 PHE188 ARG189 GLU190 GLU191 GLU192 VAL193 LEU194 GLU195
Unit 2 PRO14 VAL15 GLU16 LYS17 THR18 LEU19 LEU20 ILE21 LEU22 LYS23 PRO24 ASP25 ALA26 VAL27 ALA28 ARG29 GLY30 LEU31 VAL32 ASP33 GLU34 ILE35 ILE36 SER37 ARG38 PHE39 LYS40 LYS41 ALA42 GLY43 LEU44 LYS45 ILE46 VAL47 ALA48 LEU49 LYS50 MSE51 VAL52 LYS53 ALA54 SER55 PRO56 GLU57 GLU58 ILE59 GLU60 ARG61 PHE62 TYR63 PRO64 SER65 SER66 GLU67 GLU68 TRP69 LEU70 GLN71 SER72 ALA73 GLY74 GLN75 LYS76 LEU77 LEU78 LYS79 ALA80 TYR81 GLN82 GLU83 LEU84 GLY85 ILE86 ASP87 PRO88 ARG89 ALA90 LYS91 ILE92 GLY93 THR94 ASP95 ASP96 PRO97 VAL98 GLU99 VAL100 GLY101 ARG102 ILE103 ILE104 LYS105 ARG106 ASN107 LEU108 VAL109 LYS110 TYR111 MSE112 THR113 SER114 GLY115 PRO116 ASN117 VAL118 VAL119 MSE120 VAL121 LEU122 LYS123 GLY124 ASN125 ARG126 ALA127 VAL128 GLU129 ILE130 VAL131 ARG132 LYS133 LEU134 VAL135 GLY136 PRO137 THR138 SER139 PRO140 HIS141 SER142 ALA143 PRO144 PRO145 GLY146 THR147 ILE148 ARG149 GLY150 ASP151 TYR152 SER153 ILE154 ASP155 SER156 PRO157 ASP158 LEU159 ALA160 ALA161 GLU162 GLU163 GLY164 ARG165 VAL166 VAL167 PHE168 ASN169 LEU170 VAL171 HIS172 ALA173 SER174 ASP175 SER176 PRO177 SER178 GLU179 ALA180 GLU181 ARG182 GLU183 ILE184 ARG185 PHE186 TRP187 PHE188 ARG189 GLU190 GLU191 GLU192 VAL193 LEU194 GLU195
Unit 3 PRO14 VAL15 GLU16 LYS17 THR18 LEU19 LEU20 ILE21 LEU22 LYS23 PRO24 ASP25 ALA26 VAL27 ALA28 ARG29 GLY30 LEU31 VAL32 ASP33 GLU34 ILE35 ILE36 SER37 ARG38 PHE39 LYS40 LYS41 ALA42 GLY43 LEU44 LYS45 ILE46 VAL47 ALA48 LEU49 LYS50 MSE51 VAL52 LYS53 ALA54 SER55 PRO56 GLU57 GLU58 ILE59 GLU60 ARG61 PHE62 TYR63 PRO64 SER65 SER66 GLU67 GLU68 TRP69 LEU70 GLN71 SER72 ALA73 GLY74 GLN75 LYS76 LEU77 LEU78 LYS79 ALA80 TYR81 GLN82 GLU83 LEU84 GLY85 ILE86 ASP87 PRO88 ARG89 ALA90 LYS91 ILE92 GLY93 THR94 ASP95 ASP96 PRO97 VAL98 GLU99 VAL100 GLY101 ARG102 ILE103 ILE104 LYS105 ARG106 ASN107 LEU108 VAL109 LYS110 TYR111 MSE112 THR113 SER114 GLY115 PRO116 ASN117 VAL118 VAL119 MSE120 VAL121 LEU122 LYS123 GLY124 ASN125 ARG126 ALA127 VAL128 GLU129 ILE130 VAL131 ARG132 LYS133 LEU134 VAL135 GLY136 PRO137 THR138 SER139 PRO140 HIS141 SER142 ALA143 PRO144 PRO145 GLY146 THR147 ILE148 ARG149 GLY150 ASP151 TYR152 SER153 ILE154 ASP155 SER156 PRO157 ASP158 LEU159 ALA160 ALA161 GLU162 GLU163 GLY164 ARG165 VAL166 VAL167 PHE168 ASN169 LEU170 VAL171 HIS172 ALA173 SER174 ASP175 SER176 PRO177 SER178 GLU179 ALA180 GLU181 ARG182 GLU183 ILE184 ARG185 PHE186 TRP187 PHE188 ARG189 GLU190 GLU191 GLU192 VAL193 LEU194 GLU195

Ligands
Unit 4 TRS200 PGE500
Unit 5 TRS300 PGE600
Unit 6 TRS400 PGE700

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany