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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL MECHANISM OF INHIBITION OF THE RHO TRANSCRIPTION TERMINATION FACTOR BY THE ANTIBIOTIC 5A-(3-FORMYLPHENYLSULF DIHYDROBICYCLOMYCIN (FPDB)
Keywords RHO TRANSCRIPTION TERMINATION FACTOR; 5A-(3-FORMYLPHENYLSULF DIHYDROBICYCLOMYCIN (FPDB); ATPGAMMAS, TRANSCRIPTION-RNA CO
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1XPU     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    G 2 40 0
2  RNA    M 2 40 0
3  RNA    H 2 40 0
4  RNA    J 2 40 0
5  RNA    K 2 40 0
6  RNA    L 2 40 0
7  Protein   RHO TRANSCRIPTION TERMINATION FACTOR  A 408 3213 0
8  Protein   RHO TRANSCRIPTION TERMINATION FACTOR  B 408 3213 0
9  Protein   RHO TRANSCRIPTION TERMINATION FACTOR  C 408 3213 0
10  Protein   RHO TRANSCRIPTION TERMINATION FACTOR  D 408 3213 0
11  Protein   RHO TRANSCRIPTION TERMINATION FACTOR  E 407 3206 0
12  Protein   RHO TRANSCRIPTION TERMINATION FACTOR  F 408 3213 0
13  Ligand   RHO TRANSCRIPTION TERMINATION FACTOR  A 2 0 32
14  Ligand   RHO TRANSCRIPTION TERMINATION FACTOR  B 3 0 62
15  Ligand   RHO TRANSCRIPTION TERMINATION FACTOR  C 3 0 62
16  Ligand   RHO TRANSCRIPTION TERMINATION FACTOR  D 3 0 62
17  Ligand   RHO TRANSCRIPTION TERMINATION FACTOR  E 4 0 93
18  Ligand   RHO TRANSCRIPTION TERMINATION FACTOR  F 2 0 31
19 Water     20 0 20
total       2496 19511 362
Proteins
Unit 7 MET1 ASN2 LEU3 THR4 GLU5 LEU6 LYS7 ASN8 THR9 PRO10 VAL11 SER12 GLU13 LEU14 ILE15 THR16 LEU17 GLY18 GLU19 ASN20 MET21 GLY22 LEU23 GLU24 ASN25 LEU26 ALA27 ARG28 MET29 ARG30 LYS31 GLN32 ASP33 ILE34 ILE35 PHE36 ALA37 ILE38 LEU39 LYS40 GLN41 HIS42 ALA43 LYS44 SER45 GLY46 GLU47 ASP48 ILE49 PHE50 GLY51 ASP52 GLY53 VAL54 LEU55 GLU56 ILE57 LEU58 GLN59 ASP60 GLY61 PHE62 GLY63 PHE64 LEU65 ARG66 SER67 ALA68 ASP69 SER70 SER71 TYR72 LEU73 ALA74 GLY75 PRO76 ASP77 ASP78 ILE79 TYR80 VAL81 SER82 PRO83 SER84 GLN85 ILE86 ARG87 ARG88 PHE89 ASN90 LEU91 ARG92 THR93 GLY94 ASP95 THR96 ILE97 SER98 GLY99 LYS100 ILE101 ARG102 PRO103 PRO104 LYS105 GLU106 GLY107 GLU108 ARG109 TYR110 PHE111 ALA112 LEU113 LEU114 LYS115 VAL116 ASN117 GLU118 VAL119 ASN120 PHE121 ASP122 LYS123 PRO124 GLU125 ASN126 ASN129 LYS130 ILE131 LEU132 PHE133 GLU134 ASN135 LEU136 THR137 PRO138 LEU139 HIS140 ALA141 ASN142 SER143 ARG144 LEU145 ARG146 MET147 GLY152 SER153 THR154 GLU155 ASP156 LEU157 THR158 ALA159 ARG160 VAL161 LEU162 ASP163 LEU164 ALA165 SER166 PRO167 ILE168 GLY169 ARG170 GLY171 GLN172 ARG173 GLY174 LEU175 ILE176 VAL177 ALA178 PRO179 PRO180 LYS181 ALA182 GLY183 LYS184 THR185 MET186 LEU187 LEU188 GLN189 ASN190 ILE191 ALA192 GLN193 SER194 ILE195 ALA196 TYR197 ASN198 HIS199 PRO200 ASP201 CYS202 VAL203 LEU204 MET205 VAL206 LEU207 LEU208 ILE209 ASP210 GLU211 ARG212 PRO213 GLU214 GLU215 VAL216 THR217 GLU218 MET219 GLN220 ARG221 LEU222 VAL223 LYS224 GLY225 GLU226 VAL227 VAL228 ALA229 SER230 THR231 PHE232 ASP233 GLU234 PRO235 ALA236 SER237 ARG238 HIS239 VAL240 GLN241 VAL242 ALA243 GLU244 MET245 VAL246 ILE247 GLU248 LYS249 ALA250 LYS251 ARG252 LEU253 VAL254 GLU255 HIS256 LYS257 LYS258 ASP259 VAL260 ILE261 ILE262 LEU263 LEU264 ASP265 SER266 ILE267 THR268 ARG269 LEU270 ALA271 ARG272 ALA273 TYR274 ASN275 THR276 VAL277 VAL278 PRO279 ALA280 VAL284 LEU285 THR286 GLY287 GLY288 VAL289 ASP290 ALA291 ASN292 ALA293 LEU294 HIS295 ARG296 PRO297 LYS298 ARG299 PHE300 PHE301 GLY302 ALA303 ALA304 ARG305 ASN306 VAL307 GLU308 GLU309 GLY310 GLY311 SER312 LEU313 THR314 ILE315 ILE316 ALA317 THR318 ALA319 LEU320 ILE321 ASP322 THR323 GLY324 SER325 LYS326 MET327 ASP328 GLU329 VAL330 ILE331 TYR332 GLU333 GLU334 PHE335 LYS336 GLY337 THR338 GLY339 ASN340 MET341 GLU342 LEU343 HIS344 LEU345 SER346 ARG347 LYS348 ILE349 ALA350 GLU351 LYS352 ARG353 VAL354 PHE355 PRO356 ALA357 ILE358 ASP359 TYR360 ASN361 ARG362 SER363 GLY364 THR365 ARG366 LYS367 GLU368 GLU369 LEU370 LEU371 THR372 THR373 GLN374 GLU375 GLU376 LEU377 GLN378 LYS379 MET380 TRP381 ILE382 LEU383 ARG384 LYS385 ILE386 ILE387 HIS388 PRO389 MET390 GLY391 GLU392 ILE393 ASP394 ALA395 MET396 GLU397 PHE398 LEU399 ILE400 ASN401 LYS402 LEU403 ALA404 MET405 THR406 LYS407 THR408 ASN409 ASP410 ASP411 PHE412 PHE413 GLU414 MET415 MET416 LYS417
Unit 8 MET1 ASN2 LEU3 THR4 GLU5 LEU6 LYS7 ASN8 THR9 PRO10 VAL11 SER12 GLU13 LEU14 ILE15 THR16 LEU17 GLY18 GLU19 ASN20 MET21 GLY22 LEU23 GLU24 ASN25 LEU26 ALA27 ARG28 MET29 ARG30 LYS31 GLN32 ASP33 ILE34 ILE35 PHE36 ALA37 ILE38 LEU39 LYS40 GLN41 HIS42 ALA43 LYS44 SER45 GLY46 GLU47 ASP48 ILE49 PHE50 GLY51 ASP52 GLY53 VAL54 LEU55 GLU56 ILE57 LEU58 GLN59 ASP60 GLY61 PHE62 GLY63 PHE64 LEU65 ARG66 SER67 ALA68 ASP69 SER70 SER71 TYR72 LEU73 ALA74 GLY75 PRO76 ASP77 ASP78 ILE79 TYR80 VAL81 SER82 PRO83 SER84 GLN85 ILE86 ARG87 ARG88 PHE89 ASN90 LEU91 ARG92 THR93 GLY94 ASP95 THR96 ILE97 SER98 GLY99 LYS100 ILE101 ARG102 PRO103 PRO104 LYS105 GLU106 GLY107 GLU108 ARG109 TYR110 PHE111 ALA112 LEU113 LEU114 LYS115 VAL116 ASN117 GLU118 VAL119 ASN120 PHE121 ASP122 LYS123 PRO124 GLU125 ASN126 ASN129 LYS130 ILE131 LEU132 PHE133 GLU134 ASN135 LEU136 THR137 PRO138 LEU139 HIS140 ALA141 ASN142 SER143 ARG144 LEU145 ARG146 MET147 GLY152 SER153 THR154 GLU155 ASP156 LEU157 THR158 ALA159 ARG160 VAL161 LEU162 ASP163 LEU164 ALA165 SER166 PRO167 ILE168 GLY169 ARG170 GLY171 GLN172 ARG173 GLY174 LEU175 ILE176 VAL177 ALA178 PRO179 PRO180 LYS181 ALA182 GLY183 LYS184 THR185 MET186 LEU187 LEU188 GLN189 ASN190 ILE191 ALA192 GLN193 SER194 ILE195 ALA196 TYR197 ASN198 HIS199 PRO200 ASP201 CYS202 VAL203 LEU204 MET205 VAL206 LEU207 LEU208 ILE209 ASP210 GLU211 ARG212 PRO213 GLU214 GLU215 VAL216 THR217 GLU218 MET219 GLN220 ARG221 LEU222 VAL223 LYS224 GLY225 GLU226 VAL227 VAL228 ALA229 SER230 THR231 PHE232 ASP233 GLU234 PRO235 ALA236 SER237 ARG238 HIS239 VAL240 GLN241 VAL242 ALA243 GLU244 MET245 VAL246 ILE247 GLU248 LYS249 ALA250 LYS251 ARG252 LEU253 VAL254 GLU255 HIS256 LYS257 LYS258 ASP259 VAL260 ILE261 ILE262 LEU263 LEU264 ASP265 SER266 ILE267 THR268 ARG269 LEU270 ALA271 ARG272 ALA273 TYR274 ASN275 THR276 VAL277 VAL278 PRO279 ALA280 VAL284 LEU285 THR286 GLY287 GLY288 VAL289 ASP290 ALA291 ASN292 ALA293 LEU294 HIS295 ARG296 PRO297 LYS298 ARG299 PHE300 PHE301 GLY302 ALA303 ALA304 ARG305 ASN306 VAL307 GLU308 GLU309 GLY310 GLY311 SER312 LEU313 THR314 ILE315 ILE316 ALA317 THR318 ALA319 LEU320 ILE321 ASP322 THR323 GLY324 SER325 LYS326 MET327 ASP328 GLU329 VAL330 ILE331 TYR332 GLU333 GLU334 PHE335 LYS336 GLY337 THR338 GLY339 ASN340 MET341 GLU342 LEU343 HIS344 LEU345 SER346 ARG347 LYS348 ILE349 ALA350 GLU351 LYS352 ARG353 VAL354 PHE355 PRO356 ALA357 ILE358 ASP359 TYR360 ASN361 ARG362 SER363 GLY364 THR365 ARG366 LYS367 GLU368 GLU369 LEU370 LEU371 THR372 THR373 GLN374 GLU375 GLU376 LEU377 GLN378 LYS379 MET380 TRP381 ILE382 LEU383 ARG384 LYS385 ILE386 ILE387 HIS388 PRO389 MET390 GLY391 GLU392 ILE393 ASP394 ALA395 MET396 GLU397 PHE398 LEU399 ILE400 ASN401 LYS402 LEU403 ALA404 MET405 THR406 LYS407 THR408 ASN409 ASP410 ASP411 PHE412 PHE413 GLU414 MET415 MET416 LYS417
Unit 9 MET1 ASN2 LEU3 THR4 GLU5 LEU6 LYS7 ASN8 THR9 PRO10 VAL11 SER12 GLU13 LEU14 ILE15 THR16 LEU17 GLY18 GLU19 ASN20 MET21 GLY22 LEU23 GLU24 ASN25 LEU26 ALA27 ARG28 MET29 ARG30 LYS31 GLN32 ASP33 ILE34 ILE35 PHE36 ALA37 ILE38 LEU39 LYS40 GLN41 HIS42 ALA43 LYS44 SER45 GLY46 GLU47 ASP48 ILE49 PHE50 GLY51 ASP52 GLY53 VAL54 LEU55 GLU56 ILE57 LEU58 GLN59 ASP60 GLY61 PHE62 GLY63 PHE64 LEU65 ARG66 SER67 ALA68 ASP69 SER70 SER71 TYR72 LEU73 ALA74 GLY75 PRO76 ASP77 ASP78 ILE79 TYR80 VAL81 SER82 PRO83 SER84 GLN85 ILE86 ARG87 ARG88 PHE89 ASN90 LEU91 ARG92 THR93 GLY94 ASP95 THR96 ILE97 SER98 GLY99 LYS100 ILE101 ARG102 PRO103 PRO104 LYS105 GLU106 GLY107 GLU108 ARG109 TYR110 PHE111 ALA112 LEU113 LEU114 LYS115 VAL116 ASN117 GLU118 VAL119 ASN120 PHE121 ASP122 LYS123 PRO124 GLU125 ASN126 ASN129 LYS130 ILE131 LEU132 PHE133 GLU134 ASN135 LEU136 THR137 PRO138 LEU139 HIS140 ALA141 ASN142 SER143 ARG144 LEU145 ARG146 MET147 GLY152 SER153 THR154 GLU155 ASP156 LEU157 THR158 ALA159 ARG160 VAL161 LEU162 ASP163 LEU164 ALA165 SER166 PRO167 ILE168 GLY169 ARG170 GLY171 GLN172 ARG173 GLY174 LEU175 ILE176 VAL177 ALA178 PRO179 PRO180 LYS181 ALA182 GLY183 LYS184 THR185 MET186 LEU187 LEU188 GLN189 ASN190 ILE191 ALA192 GLN193 SER194 ILE195 ALA196 TYR197 ASN198 HIS199 PRO200 ASP201 CYS202 VAL203 LEU204 MET205 VAL206 LEU207 LEU208 ILE209 ASP210 GLU211 ARG212 PRO213 GLU214 GLU215 VAL216 THR217 GLU218 MET219 GLN220 ARG221 LEU222 VAL223 LYS224 GLY225 GLU226 VAL227 VAL228 ALA229 SER230 THR231 PHE232 ASP233 GLU234 PRO235 ALA236 SER237 ARG238 HIS239 VAL240 GLN241 VAL242 ALA243 GLU244 MET245 VAL246 ILE247 GLU248 LYS249 ALA250 LYS251 ARG252 LEU253 VAL254 GLU255 HIS256 LYS257 LYS258 ASP259 VAL260 ILE261 ILE262 LEU263 LEU264 ASP265 SER266 ILE267 THR268 ARG269 LEU270 ALA271 ARG272 ALA273 TYR274 ASN275 THR276 VAL277 VAL278 PRO279 ALA280 VAL284 LEU285 THR286 GLY287 GLY288 VAL289 ASP290 ALA291 ASN292 ALA293 LEU294 HIS295 ARG296 PRO297 LYS298 ARG299 PHE300 PHE301 GLY302 ALA303 ALA304 ARG305 ASN306 VAL307 GLU308 GLU309 GLY310 GLY311 SER312 LEU313 THR314 ILE315 ILE316 ALA317 THR318 ALA319 LEU320 ILE321 ASP322 THR323 GLY324 SER325 LYS326 MET327 ASP328 GLU329 VAL330 ILE331 TYR332 GLU333 GLU334 PHE335 LYS336 GLY337 THR338 GLY339 ASN340 MET341 GLU342 LEU343 HIS344 LEU345 SER346 ARG347 LYS348 ILE349 ALA350 GLU351 LYS352 ARG353 VAL354 PHE355 PRO356 ALA357 ILE358 ASP359 TYR360 ASN361 ARG362 SER363 GLY364 THR365 ARG366 LYS367 GLU368 GLU369 LEU370 LEU371 THR372 THR373 GLN374 GLU375 GLU376 LEU377 GLN378 LYS379 MET380 TRP381 ILE382 LEU383 ARG384 LYS385 ILE386 ILE387 HIS388 PRO389 MET390 GLY391 GLU392 ILE393 ASP394 ALA395 MET396 GLU397 PHE398 LEU399 ILE400 ASN401 LYS402 LEU403 ALA404 MET405 THR406 LYS407 THR408 ASN409 ASP410 ASP411 PHE412 PHE413 GLU414 MET415 MET416 LYS417
Unit 10 MET1 ASN2 LEU3 THR4 GLU5 LEU6 LYS7 ASN8 THR9 PRO10 VAL11 SER12 GLU13 LEU14 ILE15 THR16 LEU17 GLY18 GLU19 ASN20 MET21 GLY22 LEU23 GLU24 ASN25 LEU26 ALA27 ARG28 MET29 ARG30 LYS31 GLN32 ASP33 ILE34 ILE35 PHE36 ALA37 ILE38 LEU39 LYS40 GLN41 HIS42 ALA43 LYS44 SER45 GLY46 GLU47 ASP48 ILE49 PHE50 GLY51 ASP52 GLY53 VAL54 LEU55 GLU56 ILE57 LEU58 GLN59 ASP60 GLY61 PHE62 GLY63 PHE64 LEU65 ARG66 SER67 ALA68 ASP69 SER70 SER71 TYR72 LEU73 ALA74 GLY75 PRO76 ASP77 ASP78 ILE79 TYR80 VAL81 SER82 PRO83 SER84 GLN85 ILE86 ARG87 ARG88 PHE89 ASN90 LEU91 ARG92 THR93 GLY94 ASP95 THR96 ILE97 SER98 GLY99 LYS100 ILE101 ARG102 PRO103 PRO104 LYS105 GLU106 GLY107 GLU108 ARG109 TYR110 PHE111 ALA112 LEU113 LEU114 LYS115 VAL116 ASN117 GLU118 VAL119 ASN120 PHE121 ASP122 LYS123 PRO124 GLU125 ASN126 ASN129 LYS130 ILE131 LEU132 PHE133 GLU134 ASN135 LEU136 THR137 PRO138 LEU139 HIS140 ALA141 ASN142 SER143 ARG144 LEU145 ARG146 MET147 GLY152 SER153 THR154 GLU155 ASP156 LEU157 THR158 ALA159 ARG160 VAL161 LEU162 ASP163 LEU164 ALA165 SER166 PRO167 ILE168 GLY169 ARG170 GLY171 GLN172 ARG173 GLY174 LEU175 ILE176 VAL177 ALA178 PRO179 PRO180 LYS181 ALA182 GLY183 LYS184 THR185 MET186 LEU187 LEU188 GLN189 ASN190 ILE191 ALA192 GLN193 SER194 ILE195 ALA196 TYR197 ASN198 HIS199 PRO200 ASP201 CYS202 VAL203 LEU204 MET205 VAL206 LEU207 LEU208 ILE209 ASP210 GLU211 ARG212 PRO213 GLU214 GLU215 VAL216 THR217 GLU218 MET219 GLN220 ARG221 LEU222 VAL223 LYS224 GLY225 GLU226 VAL227 VAL228 ALA229 SER230 THR231 PHE232 ASP233 GLU234 PRO235 ALA236 SER237 ARG238 HIS239 VAL240 GLN241 VAL242 ALA243 GLU244 MET245 VAL246 ILE247 GLU248 LYS249 ALA250 LYS251 ARG252 LEU253 VAL254 GLU255 HIS256 LYS257 LYS258 ASP259 VAL260 ILE261 ILE262 LEU263 LEU264 ASP265 SER266 ILE267 THR268 ARG269 LEU270 ALA271 ARG272 ALA273 TYR274 ASN275 THR276 VAL277 VAL278 PRO279 ALA280 VAL284 LEU285 THR286 GLY287 GLY288 VAL289 ASP290 ALA291 ASN292 ALA293 LEU294 HIS295 ARG296 PRO297 LYS298 ARG299 PHE300 PHE301 GLY302 ALA303 ALA304 ARG305 ASN306 VAL307 GLU308 GLU309 GLY310 GLY311 SER312 LEU313 THR314 ILE315 ILE316 ALA317 THR318 ALA319 LEU320 ILE321 ASP322 THR323 GLY324 SER325 LYS326 MET327 ASP328 GLU329 VAL330 ILE331 TYR332 GLU333 GLU334 PHE335 LYS336 GLY337 THR338 GLY339 ASN340 MET341 GLU342 LEU343 HIS344 LEU345 SER346 ARG347 LYS348 ILE349 ALA350 GLU351 LYS352 ARG353 VAL354 PHE355 PRO356 ALA357 ILE358 ASP359 TYR360 ASN361 ARG362 SER363 GLY364 THR365 ARG366 LYS367 GLU368 GLU369 LEU370 LEU371 THR372 THR373 GLN374 GLU375 GLU376 LEU377 GLN378 LYS379 MET380 TRP381 ILE382 LEU383 ARG384 LYS385 ILE386 ILE387 HIS388 PRO389 MET390 GLY391 GLU392 ILE393 ASP394 ALA395 MET396 GLU397 PHE398 LEU399 ILE400 ASN401 LYS402 LEU403 ALA404 MET405 THR406 LYS407 THR408 ASN409 ASP410 ASP411 PHE412 PHE413 GLU414 MET415 MET416 LYS417
Unit 11 MET1 ASN2 LEU3 THR4 GLU5 LEU6 LYS7 ASN8 THR9 PRO10 VAL11 SER12 GLU13 LEU14 ILE15 THR16 LEU17 GLY18 GLU19 ASN20 MET21 GLY22 LEU23 GLU24 ASN25 LEU26 ALA27 ARG28 MET29 ARG30 LYS31 GLN32 ASP33 ILE34 ILE35 PHE36 ALA37 ILE38 LEU39 LYS40 GLN41 HIS42 ALA43 LYS44 SER45 GLY46 GLU47 ASP48 ILE49 PHE50 GLY51 ASP52 GLY53 VAL54 LEU55 GLU56 ILE57 LEU58 GLN59 ASP60 GLY61 PHE62 GLY63 PHE64 LEU65 ARG66 SER67 ALA68 ASP69 SER70 SER71 TYR72 LEU73 ALA74 GLY75 PRO76 ASP77 ASP78 ILE79 TYR80 VAL81 SER82 PRO83 SER84 GLN85 ILE86 ARG87 ARG88 PHE89 ASN90 LEU91 ARG92 THR93 GLY94 ASP95 THR96 ILE97 SER98 GLY99 LYS100 ILE101 ARG102 PRO103 PRO104 LYS105 GLU106 GLY107 GLU108 ARG109 TYR110 PHE111 ALA112 LEU113 LEU114 LYS115 VAL116 ASN117 GLU118 VAL119 ASN120 PHE121 ASP122 LYS123 PRO124 GLU125 ASN126 ASN129 LYS130 ILE131 LEU132 PHE133 GLU134 ASN135 LEU136 THR137 PRO138 LEU139 HIS140 ALA141 ASN142 SER143 ARG144 LEU145 ARG146 MET147 GLY152 SER153 THR154 GLU155 ASP156 LEU157 THR158 ALA159 ARG160 VAL161 LEU162 ASP163 LEU164 ALA165 SER166 PRO167 ILE168 GLY169 ARG170 GLY171 GLN172 ARG173 GLY174 LEU175 ILE176 VAL177 ALA178 PRO179 PRO180 LYS181 ALA182 GLY183 LYS184 THR185 MET186 LEU187 LEU188 GLN189 ASN190 ILE191 ALA192 GLN193 SER194 ILE195 ALA196 TYR197 ASN198 HIS199 PRO200 ASP201 CYS202 VAL203 LEU204 MET205 VAL206 LEU207 LEU208 ILE209 ASP210 GLU211 ARG212 PRO213 GLU214 GLU215 VAL216 THR217 GLU218 MET219 GLN220 ARG221 LEU222 VAL223 LYS224 GLY225 GLU226 VAL227 VAL228 ALA229 SER230 THR231 PHE232 ASP233 GLU234 PRO235 ALA236 SER237 ARG238 HIS239 VAL240 GLN241 VAL242 ALA243 GLU244 MET245 VAL246 ILE247 GLU248 LYS249 ALA250 LYS251 ARG252 LEU253 VAL254 GLU255 HIS256 LYS257 LYS258 ASP259 VAL260 ILE261 ILE262 LEU263 LEU264 ASP265 SER266 ILE267 THR268 ARG269 LEU270 ALA271 ARG272 ALA273 TYR274 ASN275 THR276 VAL277 VAL278 PRO279 ALA280 LEU285 THR286 GLY287 GLY288 VAL289 ASP290 ALA291 ASN292 ALA293 LEU294 HIS295 ARG296 PRO297 LYS298 ARG299 PHE300 PHE301 GLY302 ALA303 ALA304 ARG305 ASN306 VAL307 GLU308 GLU309 GLY310 GLY311 SER312 LEU313 THR314 ILE315 ILE316 ALA317 THR318 ALA319 LEU320 ILE321 ASP322 THR323 GLY324 SER325 LYS326 MET327 ASP328 GLU329 VAL330 ILE331 TYR332 GLU333 GLU334 PHE335 LYS336 GLY337 THR338 GLY339 ASN340 MET341 GLU342 LEU343 HIS344 LEU345 SER346 ARG347 LYS348 ILE349 ALA350 GLU351 LYS352 ARG353 VAL354 PHE355 PRO356 ALA357 ILE358 ASP359 TYR360 ASN361 ARG362 SER363 GLY364 THR365 ARG366 LYS367 GLU368 GLU369 LEU370 LEU371 THR372 THR373 GLN374 GLU375 GLU376 LEU377 GLN378 LYS379 MET380 TRP381 ILE382 LEU383 ARG384 LYS385 ILE386 ILE387 HIS388 PRO389 MET390 GLY391 GLU392 ILE393 ASP394 ALA395 MET396 GLU397 PHE398 LEU399 ILE400 ASN401 LYS402 LEU403 ALA404 MET405 THR406 LYS407 THR408 ASN409 ASP410 ASP411 PHE412 PHE413 GLU414 MET415 MET416 LYS417
Unit 12 MET1 ASN2 LEU3 THR4 GLU5 LEU6 LYS7 ASN8 THR9 PRO10 VAL11 SER12 GLU13 LEU14 ILE15 THR16 LEU17 GLY18 GLU19 ASN20 MET21 GLY22 LEU23 GLU24 ASN25 LEU26 ALA27 ARG28 MET29 ARG30 LYS31 GLN32 ASP33 ILE34 ILE35 PHE36 ALA37 ILE38 LEU39 LYS40 GLN41 HIS42 ALA43 LYS44 SER45 GLY46 GLU47 ASP48 ILE49 PHE50 GLY51 ASP52 GLY53 VAL54 LEU55 GLU56 ILE57 LEU58 GLN59 ASP60 GLY61 PHE62 GLY63 PHE64 LEU65 ARG66 SER67 ALA68 ASP69 SER70 SER71 TYR72 LEU73 ALA74 GLY75 PRO76 ASP77 ASP78 ILE79 TYR80 VAL81 SER82 PRO83 SER84 GLN85 ILE86 ARG87 ARG88 PHE89 ASN90 LEU91 ARG92 THR93 GLY94 ASP95 THR96 ILE97 SER98 GLY99 LYS100 ILE101 ARG102 PRO103 PRO104 LYS105 GLU106 GLY107 GLU108 ARG109 TYR110 PHE111 ALA112 LEU113 LEU114 LYS115 VAL116 ASN117 GLU118 VAL119 ASN120 PHE121 ASP122 LYS123 PRO124 GLU125 ASN126 ASN129 LYS130 ILE131 LEU132 PHE133 GLU134 ASN135 LEU136 THR137 PRO138 LEU139 HIS140 ALA141 ASN142 SER143 ARG144 LEU145 ARG146 MET147 GLY152 SER153 THR154 GLU155 ASP156 LEU157 THR158 ALA159 ARG160 VAL161 LEU162 ASP163 LEU164 ALA165 SER166 PRO167 ILE168 GLY169 ARG170 GLY171 GLN172 ARG173 GLY174 LEU175 ILE176 VAL177 ALA178 PRO179 PRO180 LYS181 ALA182 GLY183 LYS184 THR185 MET186 LEU187 LEU188 GLN189 ASN190 ILE191 ALA192 GLN193 SER194 ILE195 ALA196 TYR197 ASN198 HIS199 PRO200 ASP201 CYS202 VAL203 LEU204 MET205 VAL206 LEU207 LEU208 ILE209 ASP210 GLU211 ARG212 PRO213 GLU214 GLU215 VAL216 THR217 GLU218 MET219 GLN220 ARG221 LEU222 VAL223 LYS224 GLY225 GLU226 VAL227 VAL228 ALA229 SER230 THR231 PHE232 ASP233 GLU234 PRO235 ALA236 SER237 ARG238 HIS239 VAL240 GLN241 VAL242 ALA243 GLU244 MET245 VAL246 ILE247 GLU248 LYS249 ALA250 LYS251 ARG252 LEU253 VAL254 GLU255 HIS256 LYS257 LYS258 ASP259 VAL260 ILE261 ILE262 LEU263 LEU264 ASP265 SER266 ILE267 THR268 ARG269 LEU270 ALA271 ARG272 ALA273 TYR274 ASN275 THR276 VAL277 VAL278 PRO279 ALA280 VAL284 LEU285 THR286 GLY287 GLY288 VAL289 ASP290 ALA291 ASN292 ALA293 LEU294 HIS295 ARG296 PRO297 LYS298 ARG299 PHE300 PHE301 GLY302 ALA303 ALA304 ARG305 ASN306 VAL307 GLU308 GLU309 GLY310 GLY311 SER312 LEU313 THR314 ILE315 ILE316 ALA317 THR318 ALA319 LEU320 ILE321 ASP322 THR323 GLY324 SER325 LYS326 MET327 ASP328 GLU329 VAL330 ILE331 TYR332 GLU333 GLU334 PHE335 LYS336 GLY337 THR338 GLY339 ASN340 MET341 GLU342 LEU343 HIS344 LEU345 SER346 ARG347 LYS348 ILE349 ALA350 GLU351 LYS352 ARG353 VAL354 PHE355 PRO356 ALA357 ILE358 ASP359 TYR360 ASN361 ARG362 SER363 GLY364 THR365 ARG366 LYS367 GLU368 GLU369 LEU370 LEU371 THR372 THR373 GLN374 GLU375 GLU376 LEU377 GLN378 LYS379 MET380 TRP381 ILE382 LEU383 ARG384 LYS385 ILE386 ILE387 HIS388 PRO389 MET390 GLY391 GLU392 ILE393 ASP394 ALA395 MET396 GLU397 PHE398 LEU399 ILE400 ASN401 LYS402 LEU403 ALA404 MET405 THR406 LYS407 THR408 ASN409 ASP410 ASP411 PHE412 PHE413 GLU414 MET415 MET416 LYS417
Nucleic acids
Unit 1 U1 C2
Unit 2 U1 C2
Unit 3 U1 C2
Unit 4 U1 C2
Unit 5 U1 C2
Unit 6 U1 C2
Ligands
Unit 13 AGS1600 MG1601
Unit 14 AGS2600 MG2601 FPD2701
Unit 15 AGS3600 MG3601 FPD3701
Unit 16 AGS4600 MG4601 FPD4701
Unit 17 AGS5600 MG5601 FPD5701 AGS6600
Unit 18 MG6601 FPD6701
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany