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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF METAL-DEPENDENT HYDROLASE YBEY FROM E. UPF0054
Keywords STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NYSGXRC T T842, PFAM FAMILY UPF0054, PSI, NEW YORK SGX RESEARCH CENTE STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1XM5     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYPOTHETICAL UPF0054 PROTEIN YBEY  A 152 1201 0
2  Protein   HYPOTHETICAL UPF0054 PROTEIN YBEY  B 152 1201 0
3  Protein   HYPOTHETICAL UPF0054 PROTEIN YBEY  C 148 1174 0
4  Protein   HYPOTHETICAL UPF0054 PROTEIN YBEY  D 152 1201 0
5  Ligand   HYPOTHETICAL UPF0054 PROTEIN YBEY  A 1 0 1
6  Ligand   HYPOTHETICAL UPF0054 PROTEIN YBEY  B 1 0 1
7  Ligand   HYPOTHETICAL UPF0054 PROTEIN YBEY  C 1 0 1
8  Ligand   HYPOTHETICAL UPF0054 PROTEIN YBEY  D 1 0 1
total       608 4777 4
Proteins
Unit 1 MET1001 SER1002 GLN1003 VAL1004 ILE1005 LEU1006 ASP1007 LEU1008 GLN1009 LEU1010 ALA1011 CYS1012 GLU1013 ASP1014 ASN1015 SER1016 GLY1017 LEU1018 PRO1019 GLU1020 GLU1021 SER1022 GLN1023 PHE1024 GLN1025 THR1026 TRP1027 LEU1028 ASN1029 ALA1030 VAL1031 ILE1032 PRO1033 GLN1034 PHE1035 GLN1036 GLU1037 GLU1038 SER1039 GLU1040 VAL1041 THR1042 ILE1043 ARG1044 VAL1045 VAL1046 ASP1047 THR1048 ALA1049 GLU1050 SER1051 HIS1052 SER1053 LEU1054 ASN1055 LEU1056 THR1057 TYR1058 ARG1059 GLY1060 LYS1061 ASP1062 LYS1063 PRO1064 THR1065 ASN1066 VAL1067 LEU1068 SER1069 PHE1070 PRO1071 PHE1072 GLU1073 VAL1074 PRO1075 PRO1076 GLY1077 MET1078 GLU1079 MET1080 SER1081 LEU1082 LEU1083 GLY1084 ASP1085 LEU1086 VAL1087 ILE1088 CYS1089 ARG1090 GLN1091 VAL1092 VAL1093 GLU1094 LYS1095 GLU1096 ALA1097 GLN1098 GLU1099 GLN1100 GLY1101 LYS1102 PRO1103 LEU1104 GLU1105 ALA1106 HIS1107 TRP1108 ALA1109 HIS1110 MET1111 VAL1112 VAL1113 HIS1114 GLY1115 SER1116 LEU1117 HIS1118 LEU1119 LEU1120 GLY1121 TYR1122 ASP1123 HIS1124 ILE1125 GLU1126 ASP1127 ASP1128 GLU1129 ALA1130 GLU1131 GLU1132 MET1133 GLU1134 ALA1135 LEU1136 GLU1137 THR1138 GLU1139 ILE1140 MET1141 LEU1142 ALA1143 LEU1144 GLY1145 TYR1146 GLU1147 ASP1148 PRO1149 TYR1150 ILE1151 ALA1152
Unit 2 MET2001 SER2002 GLN2003 VAL2004 ILE2005 LEU2006 ASP2007 LEU2008 GLN2009 LEU2010 ALA2011 CYS2012 GLU2013 ASP2014 ASN2015 SER2016 GLY2017 LEU2018 PRO2019 GLU2020 GLU2021 SER2022 GLN2023 PHE2024 GLN2025 THR2026 TRP2027 LEU2028 ASN2029 ALA2030 VAL2031 ILE2032 PRO2033 GLN2034 PHE2035 GLN2036 GLU2037 GLU2038 SER2039 GLU2040 VAL2041 THR2042 ILE2043 ARG2044 VAL2045 VAL2046 ASP2047 THR2048 ALA2049 GLU2050 SER2051 HIS2052 SER2053 LEU2054 ASN2055 LEU2056 THR2057 TYR2058 ARG2059 GLY2060 LYS2061 ASP2062 LYS2063 PRO2064 THR2065 ASN2066 VAL2067 LEU2068 SER2069 PHE2070 PRO2071 PHE2072 GLU2073 VAL2074 PRO2075 PRO2076 GLY2077 MET2078 GLU2079 MET2080 SER2081 LEU2082 LEU2083 GLY2084 ASP2085 LEU2086 VAL2087 ILE2088 CYS2089 ARG2090 GLN2091 VAL2092 VAL2093 GLU2094 LYS2095 GLU2096 ALA2097 GLN2098 GLU2099 GLN2100 GLY2101 LYS2102 PRO2103 LEU2104 GLU2105 ALA2106 HIS2107 TRP2108 ALA2109 HIS2110 MET2111 VAL2112 VAL2113 HIS2114 GLY2115 SER2116 LEU2117 HIS2118 LEU2119 LEU2120 GLY2121 TYR2122 ASP2123 HIS2124 ILE2125 GLU2126 ASP2127 ASP2128 GLU2129 ALA2130 GLU2131 GLU2132 MET2133 GLU2134 ALA2135 LEU2136 GLU2137 THR2138 GLU2139 ILE2140 MET2141 LEU2142 ALA2143 LEU2144 GLY2145 TYR2146 GLU2147 ASP2148 PRO2149 TYR2150 ILE2151 ALA2152
Unit 3 GLN3003 VAL3004 ILE3005 LEU3006 ASP3007 LEU3008 GLN3009 LEU3010 ALA3011 CYS3012 GLU3013 ASP3014 ASN3015 SER3016 GLY3017 LEU3018 PRO3019 GLU3020 GLU3021 SER3022 GLN3023 PHE3024 GLN3025 THR3026 TRP3027 LEU3028 ASN3029 ALA3030 VAL3031 ILE3032 PRO3033 GLN3034 PHE3035 GLN3036 GLU3037 GLU3038 SER3039 GLU3040 VAL3041 THR3042 ILE3043 ARG3044 VAL3045 VAL3046 ASP3047 THR3048 ALA3049 GLU3050 SER3051 HIS3052 SER3053 LEU3054 ASN3055 LEU3056 THR3057 TYR3058 ARG3059 GLY3060 LYS3061 ASP3062 LYS3063 PRO3064 THR3065 ASN3066 VAL3067 LEU3068 SER3069 PHE3070 PRO3071 PHE3072 GLU3073 VAL3074 PRO3075 PRO3076 GLY3077 MET3078 GLU3079 MET3080 SER3081 LEU3082 LEU3083 GLY3084 ASP3085 LEU3086 VAL3087 ILE3088 CYS3089 ARG3090 GLN3091 VAL3092 VAL3093 GLU3094 LYS3095 GLU3096 ALA3097 GLN3098 GLU3099 GLN3100 GLY3101 LYS3102 PRO3103 LEU3104 GLU3105 ALA3106 HIS3107 TRP3108 ALA3109 HIS3110 MET3111 VAL3112 VAL3113 HIS3114 GLY3115 SER3116 LEU3117 HIS3118 LEU3119 LEU3120 GLY3121 TYR3122 ASP3123 HIS3124 ILE3125 GLU3126 ASP3127 ASP3128 GLU3129 ALA3130 GLU3131 GLU3132 MET3133 GLU3134 ALA3135 LEU3136 GLU3137 THR3138 GLU3139 ILE3140 MET3141 LEU3142 ALA3143 LEU3144 GLY3145 TYR3146 GLU3147 ASP3148 PRO3149 TYR3150
Unit 4 MET4001 SER4002 GLN4003 VAL4004 ILE4005 LEU4006 ASP4007 LEU4008 GLN4009 LEU4010 ALA4011 CYS4012 GLU4013 ASP4014 ASN4015 SER4016 GLY4017 LEU4018 PRO4019 GLU4020 GLU4021 SER4022 GLN4023 PHE4024 GLN4025 THR4026 TRP4027 LEU4028 ASN4029 ALA4030 VAL4031 ILE4032 PRO4033 GLN4034 PHE4035 GLN4036 GLU4037 GLU4038 SER4039 GLU4040 VAL4041 THR4042 ILE4043 ARG4044 VAL4045 VAL4046 ASP4047 THR4048 ALA4049 GLU4050 SER4051 HIS4052 SER4053 LEU4054 ASN4055 LEU4056 THR4057 TYR4058 ARG4059 GLY4060 LYS4061 ASP4062 LYS4063 PRO4064 THR4065 ASN4066 VAL4067 LEU4068 SER4069 PHE4070 PRO4071 PHE4072 GLU4073 VAL4074 PRO4075 PRO4076 GLY4077 MET4078 GLU4079 MET4080 SER4081 LEU4082 LEU4083 GLY4084 ASP4085 LEU4086 VAL4087 ILE4088 CYS4089 ARG4090 GLN4091 VAL4092 VAL4093 GLU4094 LYS4095 GLU4096 ALA4097 GLN4098 GLU4099 GLN4100 GLY4101 LYS4102 PRO4103 LEU4104 GLU4105 ALA4106 HIS4107 TRP4108 ALA4109 HIS4110 MET4111 VAL4112 VAL4113 HIS4114 GLY4115 SER4116 LEU4117 HIS4118 LEU4119 LEU4120 GLY4121 TYR4122 ASP4123 HIS4124 ILE4125 GLU4126 ASP4127 ASP4128 GLU4129 ALA4130 GLU4131 GLU4132 MET4133 GLU4134 ALA4135 LEU4136 GLU4137 THR4138 GLU4139 ILE4140 MET4141 LEU4142 ALA4143 LEU4144 GLY4145 TYR4146 GLU4147 ASP4148 PRO4149 TYR4150 ILE4151 ALA4152
Ligands
Unit 5 NI5001
Unit 6 NI5002
Unit 7 NI5003
Unit 8 NI5004
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany