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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE SYNTHASE DAPA-2 (BA3935) FROM BACILLUS ANTHRACIS AT 1.94A RESOLUTION.
Keywords DIHYDRODIPICOLINATE SYNTHASE; TIM BARREL; CRYSTAL STRUCTURE; LYSINE BIOSYNTHESIS;SPINE, LYASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XKY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIHYDRODIPICOLINATE SYNTHASE  A 292 2188 0
2  Protein   DIHYDRODIPICOLINATE SYNTHASE  B 292 2188 0
3  Protein   DIHYDRODIPICOLINATE SYNTHASE  C 292 2188 0
4  Protein   DIHYDRODIPICOLINATE SYNTHASE  D 292 2188 0
5  Ligand   DIHYDRODIPICOLINATE SYNTHASE  A 2 0 2
6  Ligand   DIHYDRODIPICOLINATE SYNTHASE  B 3 0 3
7  Ligand   DIHYDRODIPICOLINATE SYNTHASE  C 3 0 3
8  Ligand   DIHYDRODIPICOLINATE SYNTHASE  D 2 0 2
9 Water     1748 0 1748
total       2926 8752 1758

Proteins
Unit 1 MET1 ILE2 ASP3 PHE4 GLY5 THR6 ILE7 ALA8 THR9 ALA10 MET11 VAL12 THR13 PRO14 PHE15 ASP16 ILE17 ASN18 GLY19 ASN20 ILE21 ASP22 PHE23 ALA24 LYS25 THR26 THR27 LYS28 LEU29 VAL30 ASN31 TYR32 LEU33 ILE34 ASP35 ASN36 GLY37 THR38 THR39 ALA40 ILE41 VAL42 VAL43 GLY44 GLY45 THR46 THR47 GLY48 GLU49 SER50 PRO51 THR52 LEU53 THR54 SER55 GLU56 GLU57 LYS58 VAL59 ALA60 LEU61 TYR62 ARG63 HIS64 VAL65 VAL66 SER67 VAL68 VAL69 ASP70 LYS71 ARG72 VAL73 PRO74 VAL75 ILE76 ALA77 GLY78 THR79 GLY80 SER81 ASN82 ASN83 THR84 HIS85 ALA86 SER87 ILE88 ASP89 LEU90 THR91 LYS92 LYS93 ALA94 THR95 GLU96 VAL97 GLY98 VAL99 ASP100 ALA101 VAL102 MET103 LEU104 VAL105 ALA106 PRO107 TYR108 TYR109 ASN110 LYS111 PRO112 SER113 GLN114 GLU115 GLY116 MET117 TYR118 GLN119 HIS120 PHE121 LYS122 ALA123 ILE124 ALA125 GLU126 SER127 THR128 PRO129 LEU130 PRO131 VAL132 MET133 LEU134 TYR135 ASN136 VAL137 PRO138 GLY139 ARG140 SER141 ILE142 VAL143 GLN144 ILE145 SER146 VAL147 ASP148 THR149 VAL150 VAL151 ARG152 LEU153 SER154 GLU155 ILE156 GLU157 ASN158 ILE159 VAL160 ALA161 ILE162 LYS163 ASP164 ALA165 GLY166 GLY167 ASP168 VAL169 LEU170 THR171 MET172 THR173 GLU174 ILE175 ILE176 GLU177 LYS178 THR179 ALA180 ASP181 ASP182 PHE183 ALA184 VAL185 TYR186 SER187 GLY188 ASP189 ASP190 GLY191 LEU192 THR193 LEU194 PRO195 ALA196 MET197 ALA198 VAL199 GLY200 ALA201 LYS202 GLY203 ILE204 VAL205 SER206 VAL207 ALA208 SER209 HIS210 VAL211 ILE212 GLY213 ASN214 GLU215 MET216 GLN217 GLU218 MET219 ILE220 ALA221 ALA222 PHE223 GLN224 ALA225 GLY226 GLU227 PHE228 LYS229 LYS230 ALA231 GLN232 LYS233 LEU234 HIS235 GLN236 LEU237 LEU238 VAL239 ARG240 VAL241 THR242 ASP243 SER244 LEU245 PHE246 MET247 ALA248 PRO249 SER250 PRO251 THR252 PRO253 VAL254 LYS255 THR256 ALA257 LEU258 GLN259 MET260 VAL261 GLY262 LEU263 ASP264 VAL265 GLY266 SER267 VAL268 ARG269 LEU270 PRO271 LEU272 LEU273 PRO274 LEU275 THR276 GLU277 GLU278 GLU279 ARG280 VAL281 THR282 LEU283 GLN284 SER285 VAL286 MET287 GLN288 SER289 ILE290 PRO291 ARG292
Unit 2 MET1 ILE2 ASP3 PHE4 GLY5 THR6 ILE7 ALA8 THR9 ALA10 MET11 VAL12 THR13 PRO14 PHE15 ASP16 ILE17 ASN18 GLY19 ASN20 ILE21 ASP22 PHE23 ALA24 LYS25 THR26 THR27 LYS28 LEU29 VAL30 ASN31 TYR32 LEU33 ILE34 ASP35 ASN36 GLY37 THR38 THR39 ALA40 ILE41 VAL42 VAL43 GLY44 GLY45 THR46 THR47 GLY48 GLU49 SER50 PRO51 THR52 LEU53 THR54 SER55 GLU56 GLU57 LYS58 VAL59 ALA60 LEU61 TYR62 ARG63 HIS64 VAL65 VAL66 SER67 VAL68 VAL69 ASP70 LYS71 ARG72 VAL73 PRO74 VAL75 ILE76 ALA77 GLY78 THR79 GLY80 SER81 ASN82 ASN83 THR84 HIS85 ALA86 SER87 ILE88 ASP89 LEU90 THR91 LYS92 LYS93 ALA94 THR95 GLU96 VAL97 GLY98 VAL99 ASP100 ALA101 VAL102 MET103 LEU104 VAL105 ALA106 PRO107 TYR108 TYR109 ASN110 LYS111 PRO112 SER113 GLN114 GLU115 GLY116 MET117 TYR118 GLN119 HIS120 PHE121 LYS122 ALA123 ILE124 ALA125 GLU126 SER127 THR128 PRO129 LEU130 PRO131 VAL132 MET133 LEU134 TYR135 ASN136 VAL137 PRO138 GLY139 ARG140 SER141 ILE142 VAL143 GLN144 ILE145 SER146 VAL147 ASP148 THR149 VAL150 VAL151 ARG152 LEU153 SER154 GLU155 ILE156 GLU157 ASN158 ILE159 VAL160 ALA161 ILE162 LYS163 ASP164 ALA165 GLY166 GLY167 ASP168 VAL169 LEU170 THR171 MET172 THR173 GLU174 ILE175 ILE176 GLU177 LYS178 THR179 ALA180 ASP181 ASP182 PHE183 ALA184 VAL185 TYR186 SER187 GLY188 ASP189 ASP190 GLY191 LEU192 THR193 LEU194 PRO195 ALA196 MET197 ALA198 VAL199 GLY200 ALA201 LYS202 GLY203 ILE204 VAL205 SER206 VAL207 ALA208 SER209 HIS210 VAL211 ILE212 GLY213 ASN214 GLU215 MET216 GLN217 GLU218 MET219 ILE220 ALA221 ALA222 PHE223 GLN224 ALA225 GLY226 GLU227 PHE228 LYS229 LYS230 ALA231 GLN232 LYS233 LEU234 HIS235 GLN236 LEU237 LEU238 VAL239 ARG240 VAL241 THR242 ASP243 SER244 LEU245 PHE246 MET247 ALA248 PRO249 SER250 PRO251 THR252 PRO253 VAL254 LYS255 THR256 ALA257 LEU258 GLN259 MET260 VAL261 GLY262 LEU263 ASP264 VAL265 GLY266 SER267 VAL268 ARG269 LEU270 PRO271 LEU272 LEU273 PRO274 LEU275 THR276 GLU277 GLU278 GLU279 ARG280 VAL281 THR282 LEU283 GLN284 SER285 VAL286 MET287 GLN288 SER289 ILE290 PRO291 ARG292
Unit 3 MET1 ILE2 ASP3 PHE4 GLY5 THR6 ILE7 ALA8 THR9 ALA10 MET11 VAL12 THR13 PRO14 PHE15 ASP16 ILE17 ASN18 GLY19 ASN20 ILE21 ASP22 PHE23 ALA24 LYS25 THR26 THR27 LYS28 LEU29 VAL30 ASN31 TYR32 LEU33 ILE34 ASP35 ASN36 GLY37 THR38 THR39 ALA40 ILE41 VAL42 VAL43 GLY44 GLY45 THR46 THR47 GLY48 GLU49 SER50 PRO51 THR52 LEU53 THR54 SER55 GLU56 GLU57 LYS58 VAL59 ALA60 LEU61 TYR62 ARG63 HIS64 VAL65 VAL66 SER67 VAL68 VAL69 ASP70 LYS71 ARG72 VAL73 PRO74 VAL75 ILE76 ALA77 GLY78 THR79 GLY80 SER81 ASN82 ASN83 THR84 HIS85 ALA86 SER87 ILE88 ASP89 LEU90 THR91 LYS92 LYS93 ALA94 THR95 GLU96 VAL97 GLY98 VAL99 ASP100 ALA101 VAL102 MET103 LEU104 VAL105 ALA106 PRO107 TYR108 TYR109 ASN110 LYS111 PRO112 SER113 GLN114 GLU115 GLY116 MET117 TYR118 GLN119 HIS120 PHE121 LYS122 ALA123 ILE124 ALA125 GLU126 SER127 THR128 PRO129 LEU130 PRO131 VAL132 MET133 LEU134 TYR135 ASN136 VAL137 PRO138 GLY139 ARG140 SER141 ILE142 VAL143 GLN144 ILE145 SER146 VAL147 ASP148 THR149 VAL150 VAL151 ARG152 LEU153 SER154 GLU155 ILE156 GLU157 ASN158 ILE159 VAL160 ALA161 ILE162 LYS163 ASP164 ALA165 GLY166 GLY167 ASP168 VAL169 LEU170 THR171 MET172 THR173 GLU174 ILE175 ILE176 GLU177 LYS178 THR179 ALA180 ASP181 ASP182 PHE183 ALA184 VAL185 TYR186 SER187 GLY188 ASP189 ASP190 GLY191 LEU192 THR193 LEU194 PRO195 ALA196 MET197 ALA198 VAL199 GLY200 ALA201 LYS202 GLY203 ILE204 VAL205 SER206 VAL207 ALA208 SER209 HIS210 VAL211 ILE212 GLY213 ASN214 GLU215 MET216 GLN217 GLU218 MET219 ILE220 ALA221 ALA222 PHE223 GLN224 ALA225 GLY226 GLU227 PHE228 LYS229 LYS230 ALA231 GLN232 LYS233 LEU234 HIS235 GLN236 LEU237 LEU238 VAL239 ARG240 VAL241 THR242 ASP243 SER244 LEU245 PHE246 MET247 ALA248 PRO249 SER250 PRO251 THR252 PRO253 VAL254 LYS255 THR256 ALA257 LEU258 GLN259 MET260 VAL261 GLY262 LEU263 ASP264 VAL265 GLY266 SER267 VAL268 ARG269 LEU270 PRO271 LEU272 LEU273 PRO274 LEU275 THR276 GLU277 GLU278 GLU279 ARG280 VAL281 THR282 LEU283 GLN284 SER285 VAL286 MET287 GLN288 SER289 ILE290 PRO291 ARG292
Unit 4 MET1 ILE2 ASP3 PHE4 GLY5 THR6 ILE7 ALA8 THR9 ALA10 MET11 VAL12 THR13 PRO14 PHE15 ASP16 ILE17 ASN18 GLY19 ASN20 ILE21 ASP22 PHE23 ALA24 LYS25 THR26 THR27 LYS28 LEU29 VAL30 ASN31 TYR32 LEU33 ILE34 ASP35 ASN36 GLY37 THR38 THR39 ALA40 ILE41 VAL42 VAL43 GLY44 GLY45 THR46 THR47 GLY48 GLU49 SER50 PRO51 THR52 LEU53 THR54 SER55 GLU56 GLU57 LYS58 VAL59 ALA60 LEU61 TYR62 ARG63 HIS64 VAL65 VAL66 SER67 VAL68 VAL69 ASP70 LYS71 ARG72 VAL73 PRO74 VAL75 ILE76 ALA77 GLY78 THR79 GLY80 SER81 ASN82 ASN83 THR84 HIS85 ALA86 SER87 ILE88 ASP89 LEU90 THR91 LYS92 LYS93 ALA94 THR95 GLU96 VAL97 GLY98 VAL99 ASP100 ALA101 VAL102 MET103 LEU104 VAL105 ALA106 PRO107 TYR108 TYR109 ASN110 LYS111 PRO112 SER113 GLN114 GLU115 GLY116 MET117 TYR118 GLN119 HIS120 PHE121 LYS122 ALA123 ILE124 ALA125 GLU126 SER127 THR128 PRO129 LEU130 PRO131 VAL132 MET133 LEU134 TYR135 ASN136 VAL137 PRO138 GLY139 ARG140 SER141 ILE142 VAL143 GLN144 ILE145 SER146 VAL147 ASP148 THR149 VAL150 VAL151 ARG152 LEU153 SER154 GLU155 ILE156 GLU157 ASN158 ILE159 VAL160 ALA161 ILE162 LYS163 ASP164 ALA165 GLY166 GLY167 ASP168 VAL169 LEU170 THR171 MET172 THR173 GLU174 ILE175 ILE176 GLU177 LYS178 THR179 ALA180 ASP181 ASP182 PHE183 ALA184 VAL185 TYR186 SER187 GLY188 ASP189 ASP190 GLY191 LEU192 THR193 LEU194 PRO195 ALA196 MET197 ALA198 VAL199 GLY200 ALA201 LYS202 GLY203 ILE204 VAL205 SER206 VAL207 ALA208 SER209 HIS210 VAL211 ILE212 GLY213 ASN214 GLU215 MET216 GLN217 GLU218 MET219 ILE220 ALA221 ALA222 PHE223 GLN224 ALA225 GLY226 GLU227 PHE228 LYS229 LYS230 ALA231 GLN232 LYS233 LEU234 HIS235 GLN236 LEU237 LEU238 VAL239 ARG240 VAL241 THR242 ASP243 SER244 LEU245 PHE246 MET247 ALA248 PRO249 SER250 PRO251 THR252 PRO253 VAL254 LYS255 THR256 ALA257 LEU258 GLN259 MET260 VAL261 GLY262 LEU263 ASP264 VAL265 GLY266 SER267 VAL268 ARG269 LEU270 PRO271 LEU272 LEU273 PRO274 LEU275 THR276 GLU277 GLU278 GLU279 ARG280 VAL281 THR282 LEU283 GLN284 SER285 VAL286 MET287 GLN288 SER289 ILE290 PRO291 ARG292

Ligands
Unit 5 K1806 K1807
Unit 6 K1802 K1803 K1809
Unit 7 K1801 K1805 K1810
Unit 8 K1804 K1808

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany