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Sequence, Chains, Asymmetric and Biological Units

Title PROTEIN ENGINEERING OF XYLOSE (GLUCOSE) ISOMERASE FROM ACTIN MISSOURIENSIS. 1. CRYSTALLOGRAPHY AND SITE-DIRECTED MUTAGEN METAL BINDING SITES
Keywords ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XIN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   D-XYLOSE ISOMERASE  A 392 3051 0
2  Protein   D-XYLOSE ISOMERASE  B 392 3051 0
3  Protein   D-XYLOSE ISOMERASE  C 392 3051 0
4  Protein   D-XYLOSE ISOMERASE  D 392 3051 0
5  Ligand   D-XYLOSE ISOMERASE  A 2 0 11
6  Ligand   D-XYLOSE ISOMERASE  B 2 0 11
7  Ligand   D-XYLOSE ISOMERASE  C 2 0 11
8  Ligand   D-XYLOSE ISOMERASE  D 2 0 11
9 Water     889 0 889
total       2465 12204 933

Proteins
Unit 1 VAL3 GLN4 ALA5 THR6 ARG7 GLU8 ASP9 LYS10 PHE11 SER12 PHE13 GLY14 LEU15 TRP16 THR17 VAL18 GLY19 TRP20 GLN21 ALA22 ARG23 ASP24 ALA25 PHE26 GLY27 ASP28 ALA29 THR30 ARG31 THR32 ALA33 LEU34 ASP35 PRO36 VAL37 GLU38 ALA39 VAL40 HIS41 LYS42 LEU43 ALA44 GLU45 ILE46 GLY47 ALA48 TYR49 GLY50 ILE51 THR52 PHE53 HIS54 ASP55 ASP56 ASP57 LEU58 VAL59 PRO60 PHE61 GLY62 SER63 ASP64 ALA65 GLN66 THR67 ARG68 ASP69 GLY70 ILE71 ILE72 ALA73 GLY74 PHE75 LYS76 LYS77 ALA78 LEU79 ASP80 GLU81 THR82 GLY83 LEU84 ILE85 VAL86 PRO87 MET88 VAL89 THR90 THR91 ASN92 LEU93 PHE94 THR95 HIS96 PRO97 VAL98 PHE99 LYS100 ASP101 GLY102 GLY103 PHE104 THR105 SER106 ASN107 ASP108 ARG109 SER110 VAL111 ARG112 ARG113 TYR114 ALA115 ILE116 ARG117 LYS118 VAL119 LEU120 ARG121 GLN122 MET123 ASP124 LEU125 GLY126 ALA127 GLU128 LEU129 GLY130 ALA131 LYS132 THR133 LEU134 VAL135 LEU136 TRP137 GLY138 GLY139 ARG140 GLU141 GLY142 ALA143 GLU144 TYR145 ASP146 SER147 ALA148 LYS149 ASP150 VAL151 SER152 ALA153 ALA154 LEU155 ASP156 ARG157 TYR158 ARG159 GLU160 ALA161 LEU162 ASN163 LEU164 LEU165 ALA166 GLN167 TYR168 SER169 GLU170 ASP171 ARG172 GLY173 TYR174 GLY175 LEU176 ARG177 PHE178 ALA179 ILE180 GLU181 PRO182 LYS183 PRO184 ASN185 GLU186 PRO187 ARG188 GLY189 ASP190 ILE191 LEU192 LEU193 PRO194 THR195 ALA196 GLY197 HIS198 ALA199 ILE200 ALA201 PHE202 VAL203 GLN204 GLU205 LEU206 GLU207 ARG208 PRO209 GLU210 LEU211 PHE212 GLY213 ILE214 ASN215 PRO216 GLU217 THR218 GLY219 ASN220 GLU221 GLN222 MET223 SER224 ASN225 LEU226 ASN227 PHE228 THR229 GLN230 GLY231 ILE232 ALA233 GLN234 ALA235 LEU236 TRP237 HIS238 LYS239 LYS240 LEU241 PHE242 HIS243 ILE244 ASP245 LEU246 ASN247 GLY248 GLN249 HIS250 GLY251 PRO252 LYS253 PHE254 ASP255 GLN256 ASP257 LEU258 VAL259 PHE260 GLY261 HIS262 GLY263 ASP264 LEU265 LEU266 ASN267 ALA268 PHE269 SER270 LEU271 VAL272 ASP273 LEU274 LEU275 GLU276 ASN277 GLY278 PRO279 ASP280 GLY281 ALA282 PRO283 ALA284 TYR285 ASP286 GLY287 PRO288 ARG289 HIS290 PHE291 ASP292 TYR293 LYS294 PRO295 SER296 ARG297 THR298 GLU299 ASP300 TYR301 ASP302 GLY303 VAL304 TRP305 GLU306 SER307 ALA308 LYS309 ALA310 ASN311 ILE312 ARG313 MET314 TYR315 LEU316 LEU317 LEU318 LYS319 GLU320 ARG321 ALA322 LYS323 ALA324 PHE325 ARG326 ALA327 ASP328 PRO329 GLU330 VAL331 GLN332 GLU333 ALA334 LEU335 ALA336 ALA337 SER338 LYS339 VAL340 ALA341 GLU342 LEU343 LYS344 THR345 PRO346 THR347 LEU348 ASN349 PRO350 GLY351 GLU352 GLY353 TYR354 ALA355 GLU356 LEU357 LEU358 ALA359 ASP360 ARG361 SER362 ALA363 PHE364 GLU365 ASP366 TYR367 ASP368 ALA369 ASP370 ALA371 VAL372 GLY373 ALA374 LYS375 GLY376 PHE377 GLY378 PHE379 VAL380 LYS381 LEU382 ASN383 GLN384 LEU385 ALA386 ILE387 GLU388 HIS389 LEU390 LEU391 GLY392 ALA393 ARG394
Unit 2 VAL3 GLN4 ALA5 THR6 ARG7 GLU8 ASP9 LYS10 PHE11 SER12 PHE13 GLY14 LEU15 TRP16 THR17 VAL18 GLY19 TRP20 GLN21 ALA22 ARG23 ASP24 ALA25 PHE26 GLY27 ASP28 ALA29 THR30 ARG31 THR32 ALA33 LEU34 ASP35 PRO36 VAL37 GLU38 ALA39 VAL40 HIS41 LYS42 LEU43 ALA44 GLU45 ILE46 GLY47 ALA48 TYR49 GLY50 ILE51 THR52 PHE53 HIS54 ASP55 ASP56 ASP57 LEU58 VAL59 PRO60 PHE61 GLY62 SER63 ASP64 ALA65 GLN66 THR67 ARG68 ASP69 GLY70 ILE71 ILE72 ALA73 GLY74 PHE75 LYS76 LYS77 ALA78 LEU79 ASP80 GLU81 THR82 GLY83 LEU84 ILE85 VAL86 PRO87 MET88 VAL89 THR90 THR91 ASN92 LEU93 PHE94 THR95 HIS96 PRO97 VAL98 PHE99 LYS100 ASP101 GLY102 GLY103 PHE104 THR105 SER106 ASN107 ASP108 ARG109 SER110 VAL111 ARG112 ARG113 TYR114 ALA115 ILE116 ARG117 LYS118 VAL119 LEU120 ARG121 GLN122 MET123 ASP124 LEU125 GLY126 ALA127 GLU128 LEU129 GLY130 ALA131 LYS132 THR133 LEU134 VAL135 LEU136 TRP137 GLY138 GLY139 ARG140 GLU141 GLY142 ALA143 GLU144 TYR145 ASP146 SER147 ALA148 LYS149 ASP150 VAL151 SER152 ALA153 ALA154 LEU155 ASP156 ARG157 TYR158 ARG159 GLU160 ALA161 LEU162 ASN163 LEU164 LEU165 ALA166 GLN167 TYR168 SER169 GLU170 ASP171 ARG172 GLY173 TYR174 GLY175 LEU176 ARG177 PHE178 ALA179 ILE180 GLU181 PRO182 LYS183 PRO184 ASN185 GLU186 PRO187 ARG188 GLY189 ASP190 ILE191 LEU192 LEU193 PRO194 THR195 ALA196 GLY197 HIS198 ALA199 ILE200 ALA201 PHE202 VAL203 GLN204 GLU205 LEU206 GLU207 ARG208 PRO209 GLU210 LEU211 PHE212 GLY213 ILE214 ASN215 PRO216 GLU217 THR218 GLY219 ASN220 GLU221 GLN222 MET223 SER224 ASN225 LEU226 ASN227 PHE228 THR229 GLN230 GLY231 ILE232 ALA233 GLN234 ALA235 LEU236 TRP237 HIS238 LYS239 LYS240 LEU241 PHE242 HIS243 ILE244 ASP245 LEU246 ASN247 GLY248 GLN249 HIS250 GLY251 PRO252 LYS253 PHE254 ASP255 GLN256 ASP257 LEU258 VAL259 PHE260 GLY261 HIS262 GLY263 ASP264 LEU265 LEU266 ASN267 ALA268 PHE269 SER270 LEU271 VAL272 ASP273 LEU274 LEU275 GLU276 ASN277 GLY278 PRO279 ASP280 GLY281 ALA282 PRO283 ALA284 TYR285 ASP286 GLY287 PRO288 ARG289 HIS290 PHE291 ASP292 TYR293 LYS294 PRO295 SER296 ARG297 THR298 GLU299 ASP300 TYR301 ASP302 GLY303 VAL304 TRP305 GLU306 SER307 ALA308 LYS309 ALA310 ASN311 ILE312 ARG313 MET314 TYR315 LEU316 LEU317 LEU318 LYS319 GLU320 ARG321 ALA322 LYS323 ALA324 PHE325 ARG326 ALA327 ASP328 PRO329 GLU330 VAL331 GLN332 GLU333 ALA334 LEU335 ALA336 ALA337 SER338 LYS339 VAL340 ALA341 GLU342 LEU343 LYS344 THR345 PRO346 THR347 LEU348 ASN349 PRO350 GLY351 GLU352 GLY353 TYR354 ALA355 GLU356 LEU357 LEU358 ALA359 ASP360 ARG361 SER362 ALA363 PHE364 GLU365 ASP366 TYR367 ASP368 ALA369 ASP370 ALA371 VAL372 GLY373 ALA374 LYS375 GLY376 PHE377 GLY378 PHE379 VAL380 LYS381 LEU382 ASN383 GLN384 LEU385 ALA386 ILE387 GLU388 HIS389 LEU390 LEU391 GLY392 ALA393 ARG394
Unit 3 VAL3 GLN4 ALA5 THR6 ARG7 GLU8 ASP9 LYS10 PHE11 SER12 PHE13 GLY14 LEU15 TRP16 THR17 VAL18 GLY19 TRP20 GLN21 ALA22 ARG23 ASP24 ALA25 PHE26 GLY27 ASP28 ALA29 THR30 ARG31 THR32 ALA33 LEU34 ASP35 PRO36 VAL37 GLU38 ALA39 VAL40 HIS41 LYS42 LEU43 ALA44 GLU45 ILE46 GLY47 ALA48 TYR49 GLY50 ILE51 THR52 PHE53 HIS54 ASP55 ASP56 ASP57 LEU58 VAL59 PRO60 PHE61 GLY62 SER63 ASP64 ALA65 GLN66 THR67 ARG68 ASP69 GLY70 ILE71 ILE72 ALA73 GLY74 PHE75 LYS76 LYS77 ALA78 LEU79 ASP80 GLU81 THR82 GLY83 LEU84 ILE85 VAL86 PRO87 MET88 VAL89 THR90 THR91 ASN92 LEU93 PHE94 THR95 HIS96 PRO97 VAL98 PHE99 LYS100 ASP101 GLY102 GLY103 PHE104 THR105 SER106 ASN107 ASP108 ARG109 SER110 VAL111 ARG112 ARG113 TYR114 ALA115 ILE116 ARG117 LYS118 VAL119 LEU120 ARG121 GLN122 MET123 ASP124 LEU125 GLY126 ALA127 GLU128 LEU129 GLY130 ALA131 LYS132 THR133 LEU134 VAL135 LEU136 TRP137 GLY138 GLY139 ARG140 GLU141 GLY142 ALA143 GLU144 TYR145 ASP146 SER147 ALA148 LYS149 ASP150 VAL151 SER152 ALA153 ALA154 LEU155 ASP156 ARG157 TYR158 ARG159 GLU160 ALA161 LEU162 ASN163 LEU164 LEU165 ALA166 GLN167 TYR168 SER169 GLU170 ASP171 ARG172 GLY173 TYR174 GLY175 LEU176 ARG177 PHE178 ALA179 ILE180 GLU181 PRO182 LYS183 PRO184 ASN185 GLU186 PRO187 ARG188 GLY189 ASP190 ILE191 LEU192 LEU193 PRO194 THR195 ALA196 GLY197 HIS198 ALA199 ILE200 ALA201 PHE202 VAL203 GLN204 GLU205 LEU206 GLU207 ARG208 PRO209 GLU210 LEU211 PHE212 GLY213 ILE214 ASN215 PRO216 GLU217 THR218 GLY219 ASN220 GLU221 GLN222 MET223 SER224 ASN225 LEU226 ASN227 PHE228 THR229 GLN230 GLY231 ILE232 ALA233 GLN234 ALA235 LEU236 TRP237 HIS238 LYS239 LYS240 LEU241 PHE242 HIS243 ILE244 ASP245 LEU246 ASN247 GLY248 GLN249 HIS250 GLY251 PRO252 LYS253 PHE254 ASP255 GLN256 ASP257 LEU258 VAL259 PHE260 GLY261 HIS262 GLY263 ASP264 LEU265 LEU266 ASN267 ALA268 PHE269 SER270 LEU271 VAL272 ASP273 LEU274 LEU275 GLU276 ASN277 GLY278 PRO279 ASP280 GLY281 ALA282 PRO283 ALA284 TYR285 ASP286 GLY287 PRO288 ARG289 HIS290 PHE291 ASP292 TYR293 LYS294 PRO295 SER296 ARG297 THR298 GLU299 ASP300 TYR301 ASP302 GLY303 VAL304 TRP305 GLU306 SER307 ALA308 LYS309 ALA310 ASN311 ILE312 ARG313 MET314 TYR315 LEU316 LEU317 LEU318 LYS319 GLU320 ARG321 ALA322 LYS323 ALA324 PHE325 ARG326 ALA327 ASP328 PRO329 GLU330 VAL331 GLN332 GLU333 ALA334 LEU335 ALA336 ALA337 SER338 LYS339 VAL340 ALA341 GLU342 LEU343 LYS344 THR345 PRO346 THR347 LEU348 ASN349 PRO350 GLY351 GLU352 GLY353 TYR354 ALA355 GLU356 LEU357 LEU358 ALA359 ASP360 ARG361 SER362 ALA363 PHE364 GLU365 ASP366 TYR367 ASP368 ALA369 ASP370 ALA371 VAL372 GLY373 ALA374 LYS375 GLY376 PHE377 GLY378 PHE379 VAL380 LYS381 LEU382 ASN383 GLN384 LEU385 ALA386 ILE387 GLU388 HIS389 LEU390 LEU391 GLY392 ALA393 ARG394
Unit 4 VAL3 GLN4 ALA5 THR6 ARG7 GLU8 ASP9 LYS10 PHE11 SER12 PHE13 GLY14 LEU15 TRP16 THR17 VAL18 GLY19 TRP20 GLN21 ALA22 ARG23 ASP24 ALA25 PHE26 GLY27 ASP28 ALA29 THR30 ARG31 THR32 ALA33 LEU34 ASP35 PRO36 VAL37 GLU38 ALA39 VAL40 HIS41 LYS42 LEU43 ALA44 GLU45 ILE46 GLY47 ALA48 TYR49 GLY50 ILE51 THR52 PHE53 HIS54 ASP55 ASP56 ASP57 LEU58 VAL59 PRO60 PHE61 GLY62 SER63 ASP64 ALA65 GLN66 THR67 ARG68 ASP69 GLY70 ILE71 ILE72 ALA73 GLY74 PHE75 LYS76 LYS77 ALA78 LEU79 ASP80 GLU81 THR82 GLY83 LEU84 ILE85 VAL86 PRO87 MET88 VAL89 THR90 THR91 ASN92 LEU93 PHE94 THR95 HIS96 PRO97 VAL98 PHE99 LYS100 ASP101 GLY102 GLY103 PHE104 THR105 SER106 ASN107 ASP108 ARG109 SER110 VAL111 ARG112 ARG113 TYR114 ALA115 ILE116 ARG117 LYS118 VAL119 LEU120 ARG121 GLN122 MET123 ASP124 LEU125 GLY126 ALA127 GLU128 LEU129 GLY130 ALA131 LYS132 THR133 LEU134 VAL135 LEU136 TRP137 GLY138 GLY139 ARG140 GLU141 GLY142 ALA143 GLU144 TYR145 ASP146 SER147 ALA148 LYS149 ASP150 VAL151 SER152 ALA153 ALA154 LEU155 ASP156 ARG157 TYR158 ARG159 GLU160 ALA161 LEU162 ASN163 LEU164 LEU165 ALA166 GLN167 TYR168 SER169 GLU170 ASP171 ARG172 GLY173 TYR174 GLY175 LEU176 ARG177 PHE178 ALA179 ILE180 GLU181 PRO182 LYS183 PRO184 ASN185 GLU186 PRO187 ARG188 GLY189 ASP190 ILE191 LEU192 LEU193 PRO194 THR195 ALA196 GLY197 HIS198 ALA199 ILE200 ALA201 PHE202 VAL203 GLN204 GLU205 LEU206 GLU207 ARG208 PRO209 GLU210 LEU211 PHE212 GLY213 ILE214 ASN215 PRO216 GLU217 THR218 GLY219 ASN220 GLU221 GLN222 MET223 SER224 ASN225 LEU226 ASN227 PHE228 THR229 GLN230 GLY231 ILE232 ALA233 GLN234 ALA235 LEU236 TRP237 HIS238 LYS239 LYS240 LEU241 PHE242 HIS243 ILE244 ASP245 LEU246 ASN247 GLY248 GLN249 HIS250 GLY251 PRO252 LYS253 PHE254 ASP255 GLN256 ASP257 LEU258 VAL259 PHE260 GLY261 HIS262 GLY263 ASP264 LEU265 LEU266 ASN267 ALA268 PHE269 SER270 LEU271 VAL272 ASP273 LEU274 LEU275 GLU276 ASN277 GLY278 PRO279 ASP280 GLY281 ALA282 PRO283 ALA284 TYR285 ASP286 GLY287 PRO288 ARG289 HIS290 PHE291 ASP292 TYR293 LYS294 PRO295 SER296 ARG297 THR298 GLU299 ASP300 TYR301 ASP302 GLY303 VAL304 TRP305 GLU306 SER307 ALA308 LYS309 ALA310 ASN311 ILE312 ARG313 MET314 TYR315 LEU316 LEU317 LEU318 LYS319 GLU320 ARG321 ALA322 LYS323 ALA324 PHE325 ARG326 ALA327 ASP328 PRO329 GLU330 VAL331 GLN332 GLU333 ALA334 LEU335 ALA336 ALA337 SER338 LYS339 VAL340 ALA341 GLU342 LEU343 LYS344 THR345 PRO346 THR347 LEU348 ASN349 PRO350 GLY351 GLU352 GLY353 TYR354 ALA355 GLU356 LEU357 LEU358 ALA359 ASP360 ARG361 SER362 ALA363 PHE364 GLU365 ASP366 TYR367 ASP368 ALA369 ASP370 ALA371 VAL372 GLY373 ALA374 LYS375 GLY376 PHE377 GLY378 PHE379 VAL380 LYS381 LEU382 ASN383 GLN384 LEU385 ALA386 ILE387 GLU388 HIS389 LEU390 LEU391 GLY392 ALA393 ARG394

Ligands
Unit 5 MG395 XYL397
Unit 6 MG395 XYL397
Unit 7 MG395 XYL397
Unit 8 MG395 XYL397

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany