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Sequence, Chains, Asymmetric and Biological Units

Title X-RAY STRUCTURE OF A REX-FAMILY REPRESSOR/NADH COMPLEX FROM AQUATICUS
Keywords REDOX-SENSING, WINGED HELIX, ROSSMANN FOLD, NICOTINAMIDE ADE DINUCLEOTIDE, NAD, REX, THERMUS AQUATICUS, NEW YORK SGX RES CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, STRUCTURAL GENOMIC PROTEIN STRUCTURE INITIATIVE, DNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XCB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  A 205 1583 8
2  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  B 197 1522 8
3  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  C 203 1558 8
4  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  D 197 1523 8
5  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  E 203 1549 16
6  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  F 200 1550 8
7  Protein   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  G 192 1478 8
8  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  A 2 0 45
9  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  B 2 0 45
10  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  C 2 0 45
11  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  D 3 0 46
12  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  E 1 0 44
13  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  F 1 0 44
14  Ligand   REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX  G 1 0 44
total       1409 10763 377

Proteins
Unit 1 LYS2 VAL3 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY53 SER54 TYR55 GLY56 THR57 ARG58 GLY59 VAL60 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203 LYS204 TRP205 ARG206
Unit 2 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY53 SER54 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203 LYS204 TRP205 ARG206
Unit 3 LYS2 VAL3 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY53 SER54 TYR55 GLY56 THR57 ARG58 GLY59 VAL60 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203 LYS204
Unit 4 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY53 SER54 TYR55 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203 LYS204 TRP205
Unit 5 MSE1 LYS2 VAL3 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY53 SER54 TYR55 GLY56 THR57 ARG58 GLY59 VAL60 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203
Unit 6 VAL3 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY53 SER54 TYR55 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203 LYS204 TRP205 ARG206 GLU207
Unit 7 PRO4 GLU5 ALA6 ALA7 ILE8 SER9 ARG10 LEU11 ILE12 THR13 TYR14 LEU15 ARG16 ILE17 LEU18 GLU19 GLU20 LEU21 GLU22 ALA23 GLN24 GLY25 VAL26 HIS27 ARG28 THR29 SER30 SER31 GLU32 GLN33 LEU34 GLY35 GLU36 LEU37 ALA38 GLN39 VAL40 THR41 ALA42 PHE43 GLN44 VAL45 ARG46 LYS47 ASP48 LEU49 SER50 TYR51 PHE52 GLY61 TYR62 THR63 VAL64 PRO65 VAL66 LEU67 LYS68 ARG69 GLU70 LEU71 ARG72 HIS73 ILE74 LEU75 GLY76 LEU77 ASN78 ARG79 LYS80 TRP81 GLY82 LEU83 CYS84 ILE85 VAL86 GLY87 MSE88 GLY89 ARG90 LEU91 GLY92 SER93 ALA94 LEU95 ALA96 ASP97 TYR98 PRO99 GLY100 PHE101 GLY102 GLU103 SER104 PHE105 GLU106 LEU107 ARG108 GLY109 PHE110 PHE111 ASP112 VAL113 ASP114 PRO115 GLU116 LYS117 VAL118 GLY119 ARG120 PRO121 VAL122 ARG123 GLY124 GLY125 VAL126 ILE127 GLU128 HIS129 VAL130 ASP131 LEU132 LEU133 PRO134 GLN135 ARG136 VAL137 PRO138 GLY139 ARG140 ILE141 GLU142 ILE143 ALA144 LEU145 LEU146 THR147 VAL148 PRO149 ARG150 GLU151 ALA152 ALA153 GLN154 LYS155 ALA156 ALA157 ASP158 LEU159 LEU160 VAL161 ALA162 ALA163 GLY164 ILE165 LYS166 GLY167 ILE168 LEU169 ASN170 PHE171 ALA172 PRO173 VAL174 VAL175 LEU176 GLU177 VAL178 PRO179 LYS180 GLU181 VAL182 ALA183 VAL184 GLU185 ASN186 VAL187 ASP188 PHE189 LEU190 ALA191 GLY192 LEU193 THR194 ARG195 LEU196 SER197 PHE198 ALA199 ILE200 LEU201 ASN202 PRO203

Ligands
Unit 8 CA212 NAD213
Unit 9 CA212 NAD213
Unit 10 CA212 NAD213
Unit 11 CA212 CA213 NAD214
Unit 12 NAD212
Unit 13 NAD212
Unit 14 NAD212

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany