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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF STAPHLYOCOCCUS AUREUS 3-DEHYDROQUINATE SYNTHASE (DHQS) IN COMPLEX WITH ZN2+, NAD+ AND CARBAPHOSPHONATE (SOAK)
Keywords SHIKIMATE PATHWAY, AROMATIC AMINO ACID BIOSYNTHESIS, DHQS, SADHQS, CLOSED FORM, FORM B, DOMAIN MOVEMENT, CYCLASE, LYAS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1XAL     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   3-DEHYDROQUINATE SYNTHASE  A 336 2689 0
2  Protein   3-DEHYDROQUINATE SYNTHASE  B 336 2689 0
3  Ligand   3-DEHYDROQUINATE SYNTHASE  A 3 0 62
4  Ligand   3-DEHYDROQUINATE SYNTHASE  B 3 0 62
5 Water     138 0 138
total       816 5378 262

Proteins
Unit 1 MET1 LYS2 LEU3 GLN4 THR5 THR6 TYR7 PRO8 SER9 ASN10 ASN11 TYR12 PRO13 ILE14 TYR15 VAL16 GLU17 HIS18 GLY19 ALA20 ILE21 LYS22 TYR23 ILE24 GLY25 THR26 TYR27 LEU28 ASN29 GLN30 PHE31 ASP32 GLN33 SER34 PHE35 LEU36 LEU37 ILE38 ASP39 GLU40 TYR41 VAL42 ASN43 GLN44 TYR45 PHE46 ALA47 ASN48 LYS49 PHE50 ASP51 ASP52 ILE53 ASN58 VAL59 HIS60 LYS61 VAL62 ILE63 ILE64 PRO65 ALA66 GLY67 GLU68 LYS69 THR70 LYS71 THR72 PHE73 GLU74 GLN75 TYR76 GLN77 GLU78 THR79 LEU80 GLU81 TYR82 ILE83 LEU84 SER85 HIS86 HIS87 VAL88 THR89 ARG90 ASN91 THR92 ALA93 ILE94 ILE95 ALA96 VAL97 GLY98 GLY99 GLY100 ALA101 THR102 GLY103 ASP104 PHE105 ALA106 GLY107 PHE108 VAL109 ALA110 ALA111 THR112 LEU113 LEU114 ARG115 GLY116 VAL117 HIS118 PHE119 ILE120 GLN121 VAL122 PRO123 THR124 THR125 ILE126 LEU127 ALA128 HIS129 ASP130 SER131 SER132 VAL133 GLY134 GLY135 LYS136 VAL137 GLY138 ILE139 ASN140 SER141 LYS142 GLN143 GLY144 LYS145 ASN146 LEU147 ILE148 GLY149 ALA150 PHE151 TYR152 ARG153 PRO154 THR155 ALA156 VAL157 ILE158 TYR159 ASP160 LEU161 ASP162 PHE163 LEU164 LYS165 THR166 LEU167 PRO168 PHE169 LYS170 GLN171 ILE172 LEU173 SER174 GLY175 TYR176 ALA177 GLU178 VAL179 TYR180 LYS181 HIS182 ALA183 LEU184 LEU185 ASN186 GLY187 GLU188 SER189 ALA190 THR191 GLN192 ASP193 ILE194 GLU195 GLN196 HIS197 PHE198 LYS199 ASP200 ARG201 GLU202 ILE203 LEU204 GLN205 SER206 LEU207 ASN208 GLY209 MET210 ASP211 LYS212 TYR213 ILE214 ALA215 LYS216 GLY217 ILE218 GLU219 THR220 LYS221 LEU222 ASP223 ILE224 VAL225 VAL226 ALA227 ASP228 GLU229 LYS230 GLU231 GLN232 GLY233 VAL234 ARG235 LYS236 PHE237 LEU238 ASN239 LEU240 GLY241 HIS242 THR243 PHE244 GLY245 HIS246 ALA247 VAL248 GLU249 TYR250 TYR251 HIS252 LYS253 ILE254 PRO255 HIS256 GLY257 HIS258 ALA259 VAL260 MET261 VAL262 GLY263 ILE264 ILE265 TYR266 GLN267 PHE268 ILE269 VAL270 ALA271 ASN272 ALA273 LEU274 PHE275 ASP276 SER277 LYS278 HIS279 ASP280 ILE281 SER282 HIS283 TYR284 ILE285 GLN286 TYR287 LEU288 ILE289 GLN290 LEU291 GLY292 TYR293 PRO294 LEU295 ASP296 MET297 MET310 LEU311 SER312 ASP313 LYS314 LYS315 ASN316 ASP317 LYS318 GLN319 GLY320 VAL321 GLN322 MET323 VAL324 LEU325 MET326 ARG327 GLN328 PHE329 GLY330 ASP331 ILE332 VAL333 VAL334 GLN335 HIS336 VAL337 ASP338 GLN339 LEU340 THR341 LEU342 GLN343 HIS344 ALA345 CYS346 GLU347 GLN348 LEU349 LYS350 THR351 TYR352
Unit 2 MET1 LYS2 LEU3 GLN4 THR5 THR6 TYR7 PRO8 SER9 ASN10 ASN11 TYR12 PRO13 ILE14 TYR15 VAL16 GLU17 HIS18 GLY19 ALA20 ILE21 LYS22 TYR23 ILE24 GLY25 THR26 TYR27 LEU28 ASN29 GLN30 PHE31 ASP32 GLN33 SER34 PHE35 LEU36 LEU37 ILE38 ASP39 GLU40 TYR41 VAL42 ASN43 GLN44 TYR45 PHE46 ALA47 ASN48 LYS49 PHE50 ASP51 ASP52 ILE53 ASN58 VAL59 HIS60 LYS61 VAL62 ILE63 ILE64 PRO65 ALA66 GLY67 GLU68 LYS69 THR70 LYS71 THR72 PHE73 GLU74 GLN75 TYR76 GLN77 GLU78 THR79 LEU80 GLU81 TYR82 ILE83 LEU84 SER85 HIS86 HIS87 VAL88 THR89 ARG90 ASN91 THR92 ALA93 ILE94 ILE95 ALA96 VAL97 GLY98 GLY99 GLY100 ALA101 THR102 GLY103 ASP104 PHE105 ALA106 GLY107 PHE108 VAL109 ALA110 ALA111 THR112 LEU113 LEU114 ARG115 GLY116 VAL117 HIS118 PHE119 ILE120 GLN121 VAL122 PRO123 THR124 THR125 ILE126 LEU127 ALA128 HIS129 ASP130 SER131 SER132 VAL133 GLY134 GLY135 LYS136 VAL137 GLY138 ILE139 ASN140 SER141 LYS142 GLN143 GLY144 LYS145 ASN146 LEU147 ILE148 GLY149 ALA150 PHE151 TYR152 ARG153 PRO154 THR155 ALA156 VAL157 ILE158 TYR159 ASP160 LEU161 ASP162 PHE163 LEU164 LYS165 THR166 LEU167 PRO168 PHE169 LYS170 GLN171 ILE172 LEU173 SER174 GLY175 TYR176 ALA177 GLU178 VAL179 TYR180 LYS181 HIS182 ALA183 LEU184 LEU185 ASN186 GLY187 GLU188 SER189 ALA190 THR191 GLN192 ASP193 ILE194 GLU195 GLN196 HIS197 PHE198 LYS199 ASP200 ARG201 GLU202 ILE203 LEU204 GLN205 SER206 LEU207 ASN208 GLY209 MET210 ASP211 LYS212 TYR213 ILE214 ALA215 LYS216 GLY217 ILE218 GLU219 THR220 LYS221 LEU222 ASP223 ILE224 VAL225 VAL226 ALA227 ASP228 GLU229 LYS230 GLU231 GLN232 GLY233 VAL234 ARG235 LYS236 PHE237 LEU238 ASN239 LEU240 GLY241 HIS242 THR243 PHE244 GLY245 HIS246 ALA247 VAL248 GLU249 TYR250 TYR251 HIS252 LYS253 ILE254 PRO255 HIS256 GLY257 HIS258 ALA259 VAL260 MET261 VAL262 GLY263 ILE264 ILE265 TYR266 GLN267 PHE268 ILE269 VAL270 ALA271 ASN272 ALA273 LEU274 PHE275 ASP276 SER277 LYS278 HIS279 ASP280 ILE281 SER282 HIS283 TYR284 ILE285 GLN286 TYR287 LEU288 ILE289 GLN290 LEU291 GLY292 TYR293 PRO294 LEU295 ASP296 MET297 MET310 LEU311 SER312 ASP313 LYS314 LYS315 ASN316 ASP317 LYS318 GLN319 GLY320 VAL321 GLN322 MET323 VAL324 LEU325 MET326 ARG327 GLN328 PHE329 GLY330 ASP331 ILE332 VAL333 VAL334 GLN335 HIS336 VAL337 ASP338 GLN339 LEU340 THR341 LEU342 GLN343 HIS344 ALA345 CYS346 GLU347 GLN348 LEU349 LYS350 THR351 TYR352

Ligands
Unit 3 NAD400 CRB500 ZN600
Unit 4 NAD401 CRB501 ZN601

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany