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Sequence, Chains, Asymmetric and Biological Units

Title MODEL FOR BINDING OF E2F8 DBDS TO E2F CONSENSUS SEQUENCE BASED UPON STRUCTURAL HOMOLOGY TO E2F4/DP2
Keywords WINGED HELIX-TURN-HELIX, DNA BINDING DOMAINS
Experiment theoretical model
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1WZH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RIKEN CDNA 4432406C08  A 79 639 0
2  DNA    D 15 305 0
3  DNA    E 15 310 0
4  Protein   RIKEN CDNA 4432406C08  F 70 586 0
total       179 1840 0
Proteins
Unit 1 ASP263 LYS264 SER265 LEU266 ARG267 VAL268 MET269 SER270 GLN271 LYS272 PHE273 VAL274 MET275 LEU276 PHE277 LEU278 VAL279 SER280 THR281 PRO282 GLN283 ILE284 VAL285 SER286 LEU287 GLU288 ILE289 ALA290 ALA291 LYS292 ILE293 LEU294 ILE295 GLY296 GLU297 ASP298 HIS299 VAL300 GLU301 ASP302 LEU303 ASP304 LYS305 SER306 LYS307 TYR308 LYS309 THR310 LYS311 ILE312 ARG313 ARG314 LEU315 TYR316 ASP317 ILE318 ALA319 ASN320 VAL321 LEU322 SER323 SER324 LEU325 ASP326 LEU327 ILE328 LYS329 LYS330 VAL331 HIS332 VAL333 THR334 GLU335 GLU336 ARG337 GLY338 ARG339 LYS340 PRO341
Unit 4 SER112 ARG113 LYS114 GLU115 LYS116 SER117 LEU118 GLY119 LEU120 LEU121 CYS122 HIS123 LYS124 PHE125 LEU126 ALA127 ARG128 TYR129 PRO130 LYS131 TYR132 PRO133 ASN134 PRO135 ALA136 VAL137 ASN138 ASN139 ASP140 ILE141 CYS142 LEU143 ASP144 GLU145 VAL146 ALA147 GLU148 GLU149 LEU150 ASN151 VAL152 GLU153 ARG154 ARG155 ARG156 ILE157 TYR158 ASP159 ILE160 VAL161 ASN162 VAL163 LEU164 GLU165 SER166 LEU167 HIS168 MET169 VAL170 SER171 ARG172 LEU173 ALA174 LYS175 ASN176 ARG177 TYR178 THR179 TRP180 HIS181
Nucleic acids
Unit 2 T501 T502 T503 T504 C505 G506 C507 G508 C509 G510 G511 T512 T513 T514 T515
Unit 3 A601 A602 A603 A604 C605 C606 G607 C608 G609 C610 G611 A612 A613 A614 A615
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany