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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 2-KETO-3-DEOXYGLUCONATE KINASE (FORM 1) SULFOLOBUS TOKODAII
Keywords ARCHEA, SULFOLOBUS TOKOKAI, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1WYE     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   2-KETO-3-DEOXYGLUCONATE KINASE  A 309 2410 0
2  Protein   2-KETO-3-DEOXYGLUCONATE KINASE  B 309 2410 0
3  Protein   2-KETO-3-DEOXYGLUCONATE KINASE  C 309 2410 0
4  Protein   2-KETO-3-DEOXYGLUCONATE KINASE  D 309 2410 0
5  Protein   2-KETO-3-DEOXYGLUCONATE KINASE  E 309 2410 0
6  Protein   2-KETO-3-DEOXYGLUCONATE KINASE  F 309 2406 0
7 Water     380 0 380
total       2234 14456 380
Proteins
Unit 1 ALA2 LYS3 LEU4 ILE5 THR6 LEU7 GLY8 GLU9 ILE10 LEU11 ILE12 GLU13 PHE14 ASN15 ALA16 LEU17 SER18 PRO19 GLY20 PRO21 LEU22 ARG23 HIS24 VAL25 SER26 TYR27 PHE28 GLU29 LYS30 HIS31 VAL32 ALA33 GLY34 SER35 GLU36 ALA37 ASN38 TYR39 CYS40 VAL41 ALA42 PHE43 ILE44 LYS45 GLN46 GLY47 ASN48 GLU49 CYS50 GLY51 ILE52 ILE53 ALA54 LYS55 VAL56 GLY57 ASP58 ASP59 GLU60 PHE61 GLY62 TYR63 ASN64 ALA65 ILE66 GLU67 TRP68 LEU69 ARG70 GLY71 GLN72 GLY73 VAL74 ASP75 VAL76 SER77 HIS78 MET79 LYS80 ILE81 ASP82 PRO83 SER84 ALA85 PRO86 THR87 GLY88 ILE89 PHE90 PHE91 ILE92 GLN93 ARG94 HIS95 TYR96 PRO97 VAL98 PRO99 LEU100 LYS101 SER102 GLU103 SER104 ILE105 TYR106 TYR107 ARG108 LYS109 GLY110 SER111 ALA112 GLY113 SER114 LYS115 LEU116 SER117 PRO118 GLU119 ASP120 VAL121 ASP122 GLU123 GLU124 TYR125 VAL126 LYS127 SER128 ALA129 ASP130 LEU131 VAL132 HIS133 SER134 SER135 GLY136 ILE137 THR138 LEU139 ALA140 ILE141 SER142 SER143 THR144 ALA145 LYS146 GLU147 ALA148 VAL149 TYR150 LYS151 ALA152 PHE153 GLU154 ILE155 ALA156 SER157 ASN158 ARG159 SER160 PHE161 ASP162 THR163 ASN164 ILE165 ARG166 LEU167 LYS168 LEU169 TRP170 SER171 ALA172 GLU173 GLU174 ALA175 LYS176 ARG177 GLU178 ILE179 LEU180 LYS181 LEU182 LEU183 SER184 LYS185 PHE186 HIS187 LEU188 LYS189 PHE190 LEU191 ILE192 THR193 ASP194 THR195 ASP196 ASP197 SER198 LYS199 ILE200 ILE201 LEU202 GLY203 GLU204 SER205 ASP206 PRO207 ASP208 LYS209 ALA210 ALA211 LYS212 ALA213 PHE214 SER215 ASP216 TYR217 ALA218 GLU219 ILE220 ILE221 VAL222 MET223 LYS224 LEU225 GLY226 PRO227 LYS228 GLY229 ALA230 ILE231 VAL232 TYR233 TYR234 ASP235 GLY236 LYS237 LYS238 TYR239 TYR240 SER241 SER242 GLY243 TYR244 GLN245 VAL246 PRO247 VAL248 GLU249 ASP250 VAL251 THR252 GLY253 ALA254 GLY255 ASP256 ALA257 LEU258 GLY259 GLY260 THR261 PHE262 LEU263 SER264 LEU265 TYR266 TYR267 LYS268 GLY269 PHE270 GLU271 MET272 GLU273 LYS274 ALA275 LEU276 ASP277 TYR278 ALA279 ILE280 VAL281 ALA282 SER283 THR284 LEU285 ASN286 VAL287 MET288 ILE289 ARG290 GLY291 ASP292 GLN293 GLU294 ASN295 LEU296 PRO297 THR298 THR299 LYS300 ASP301 ILE302 GLU303 THR304 PHE305 LEU306 ARG307 GLU308 MET309 LYS310
Unit 2 ALA2 LYS3 LEU4 ILE5 THR6 LEU7 GLY8 GLU9 ILE10 LEU11 ILE12 GLU13 PHE14 ASN15 ALA16 LEU17 SER18 PRO19 GLY20 PRO21 LEU22 ARG23 HIS24 VAL25 SER26 TYR27 PHE28 GLU29 LYS30 HIS31 VAL32 ALA33 GLY34 SER35 GLU36 ALA37 ASN38 TYR39 CYS40 VAL41 ALA42 PHE43 ILE44 LYS45 GLN46 GLY47 ASN48 GLU49 CYS50 GLY51 ILE52 ILE53 ALA54 LYS55 VAL56 GLY57 ASP58 ASP59 GLU60 PHE61 GLY62 TYR63 ASN64 ALA65 ILE66 GLU67 TRP68 LEU69 ARG70 GLY71 GLN72 GLY73 VAL74 ASP75 VAL76 SER77 HIS78 MET79 LYS80 ILE81 ASP82 PRO83 SER84 ALA85 PRO86 THR87 GLY88 ILE89 PHE90 PHE91 ILE92 GLN93 ARG94 HIS95 TYR96 PRO97 VAL98 PRO99 LEU100 LYS101 SER102 GLU103 SER104 ILE105 TYR106 TYR107 ARG108 LYS109 GLY110 SER111 ALA112 GLY113 SER114 LYS115 LEU116 SER117 PRO118 GLU119 ASP120 VAL121 ASP122 GLU123 GLU124 TYR125 VAL126 LYS127 SER128 ALA129 ASP130 LEU131 VAL132 HIS133 SER134 SER135 GLY136 ILE137 THR138 LEU139 ALA140 ILE141 SER142 SER143 THR144 ALA145 LYS146 GLU147 ALA148 VAL149 TYR150 LYS151 ALA152 PHE153 GLU154 ILE155 ALA156 SER157 ASN158 ARG159 SER160 PHE161 ASP162 THR163 ASN164 ILE165 ARG166 LEU167 LYS168 LEU169 TRP170 SER171 ALA172 GLU173 GLU174 ALA175 LYS176 ARG177 GLU178 ILE179 LEU180 LYS181 LEU182 LEU183 SER184 LYS185 PHE186 HIS187 LEU188 LYS189 PHE190 LEU191 ILE192 THR193 ASP194 THR195 ASP196 ASP197 SER198 LYS199 ILE200 ILE201 LEU202 GLY203 GLU204 SER205 ASP206 PRO207 ASP208 LYS209 ALA210 ALA211 LYS212 ALA213 PHE214 SER215 ASP216 TYR217 ALA218 GLU219 ILE220 ILE221 VAL222 MET223 LYS224 LEU225 GLY226 PRO227 LYS228 GLY229 ALA230 ILE231 VAL232 TYR233 TYR234 ASP235 GLY236 LYS237 LYS238 TYR239 TYR240 SER241 SER242 GLY243 TYR244 GLN245 VAL246 PRO247 VAL248 GLU249 ASP250 VAL251 THR252 GLY253 ALA254 GLY255 ASP256 ALA257 LEU258 GLY259 GLY260 THR261 PHE262 LEU263 SER264 LEU265 TYR266 TYR267 LYS268 GLY269 PHE270 GLU271 MET272 GLU273 LYS274 ALA275 LEU276 ASP277 TYR278 ALA279 ILE280 VAL281 ALA282 SER283 THR284 LEU285 ASN286 VAL287 MET288 ILE289 ARG290 GLY291 ASP292 GLN293 GLU294 ASN295 LEU296 PRO297 THR298 THR299 LYS300 ASP301 ILE302 GLU303 THR304 PHE305 LEU306 ARG307 GLU308 MET309 LYS310
Unit 3 ALA2 LYS3 LEU4 ILE5 THR6 LEU7 GLY8 GLU9 ILE10 LEU11 ILE12 GLU13 PHE14 ASN15 ALA16 LEU17 SER18 PRO19 GLY20 PRO21 LEU22 ARG23 HIS24 VAL25 SER26 TYR27 PHE28 GLU29 LYS30 HIS31 VAL32 ALA33 GLY34 SER35 GLU36 ALA37 ASN38 TYR39 CYS40 VAL41 ALA42 PHE43 ILE44 LYS45 GLN46 GLY47 ASN48 GLU49 CYS50 GLY51 ILE52 ILE53 ALA54 LYS55 VAL56 GLY57 ASP58 ASP59 GLU60 PHE61 GLY62 TYR63 ASN64 ALA65 ILE66 GLU67 TRP68 LEU69 ARG70 GLY71 GLN72 GLY73 VAL74 ASP75 VAL76 SER77 HIS78 MET79 LYS80 ILE81 ASP82 PRO83 SER84 ALA85 PRO86 THR87 GLY88 ILE89 PHE90 PHE91 ILE92 GLN93 ARG94 HIS95 TYR96 PRO97 VAL98 PRO99 LEU100 LYS101 SER102 GLU103 SER104 ILE105 TYR106 TYR107 ARG108 LYS109 GLY110 SER111 ALA112 GLY113 SER114 LYS115 LEU116 SER117 PRO118 GLU119 ASP120 VAL121 ASP122 GLU123 GLU124 TYR125 VAL126 LYS127 SER128 ALA129 ASP130 LEU131 VAL132 HIS133 SER134 SER135 GLY136 ILE137 THR138 LEU139 ALA140 ILE141 SER142 SER143 THR144 ALA145 LYS146 GLU147 ALA148 VAL149 TYR150 LYS151 ALA152 PHE153 GLU154 ILE155 ALA156 SER157 ASN158 ARG159 SER160 PHE161 ASP162 THR163 ASN164 ILE165 ARG166 LEU167 LYS168 LEU169 TRP170 SER171 ALA172 GLU173 GLU174 ALA175 LYS176 ARG177 GLU178 ILE179 LEU180 LYS181 LEU182 LEU183 SER184 LYS185 PHE186 HIS187 LEU188 LYS189 PHE190 LEU191 ILE192 THR193 ASP194 THR195 ASP196 ASP197 SER198 LYS199 ILE200 ILE201 LEU202 GLY203 GLU204 SER205 ASP206 PRO207 ASP208 LYS209 ALA210 ALA211 LYS212 ALA213 PHE214 SER215 ASP216 TYR217 ALA218 GLU219 ILE220 ILE221 VAL222 MET223 LYS224 LEU225 GLY226 PRO227 LYS228 GLY229 ALA230 ILE231 VAL232 TYR233 TYR234 ASP235 GLY236 LYS237 LYS238 TYR239 TYR240 SER241 SER242 GLY243 TYR244 GLN245 VAL246 PRO247 VAL248 GLU249 ASP250 VAL251 THR252 GLY253 ALA254 GLY255 ASP256 ALA257 LEU258 GLY259 GLY260 THR261 PHE262 LEU263 SER264 LEU265 TYR266 TYR267 LYS268 GLY269 PHE270 GLU271 MET272 GLU273 LYS274 ALA275 LEU276 ASP277 TYR278 ALA279 ILE280 VAL281 ALA282 SER283 THR284 LEU285 ASN286 VAL287 MET288 ILE289 ARG290 GLY291 ASP292 GLN293 GLU294 ASN295 LEU296 PRO297 THR298 THR299 LYS300 ASP301 ILE302 GLU303 THR304 PHE305 LEU306 ARG307 GLU308 MET309 LYS310
Unit 4 ALA2 LYS3 LEU4 ILE5 THR6 LEU7 GLY8 GLU9 ILE10 LEU11 ILE12 GLU13 PHE14 ASN15 ALA16 LEU17 SER18 PRO19 GLY20 PRO21 LEU22 ARG23 HIS24 VAL25 SER26 TYR27 PHE28 GLU29 LYS30 HIS31 VAL32 ALA33 GLY34 SER35 GLU36 ALA37 ASN38 TYR39 CYS40 VAL41 ALA42 PHE43 ILE44 LYS45 GLN46 GLY47 ASN48 GLU49 CYS50 GLY51 ILE52 ILE53 ALA54 LYS55 VAL56 GLY57 ASP58 ASP59 GLU60 PHE61 GLY62 TYR63 ASN64 ALA65 ILE66 GLU67 TRP68 LEU69 ARG70 GLY71 GLN72 GLY73 VAL74 ASP75 VAL76 SER77 HIS78 MET79 LYS80 ILE81 ASP82 PRO83 SER84 ALA85 PRO86 THR87 GLY88 ILE89 PHE90 PHE91 ILE92 GLN93 ARG94 HIS95 TYR96 PRO97 VAL98 PRO99 LEU100 LYS101 SER102 GLU103 SER104 ILE105 TYR106 TYR107 ARG108 LYS109 GLY110 SER111 ALA112 GLY113 SER114 LYS115 LEU116 SER117 PRO118 GLU119 ASP120 VAL121 ASP122 GLU123 GLU124 TYR125 VAL126 LYS127 SER128 ALA129 ASP130 LEU131 VAL132 HIS133 SER134 SER135 GLY136 ILE137 THR138 LEU139 ALA140 ILE141 SER142 SER143 THR144 ALA145 LYS146 GLU147 ALA148 VAL149 TYR150 LYS151 ALA152 PHE153 GLU154 ILE155 ALA156 SER157 ASN158 ARG159 SER160 PHE161 ASP162 THR163 ASN164 ILE165 ARG166 LEU167 LYS168 LEU169 TRP170 SER171 ALA172 GLU173 GLU174 ALA175 LYS176 ARG177 GLU178 ILE179 LEU180 LYS181 LEU182 LEU183 SER184 LYS185 PHE186 HIS187 LEU188 LYS189 PHE190 LEU191 ILE192 THR193 ASP194 THR195 ASP196 ASP197 SER198 LYS199 ILE200 ILE201 LEU202 GLY203 GLU204 SER205 ASP206 PRO207 ASP208 LYS209 ALA210 ALA211 LYS212 ALA213 PHE214 SER215 ASP216 TYR217 ALA218 GLU219 ILE220 ILE221 VAL222 MET223 LYS224 LEU225 GLY226 PRO227 LYS228 GLY229 ALA230 ILE231 VAL232 TYR233 TYR234 ASP235 GLY236 LYS237 LYS238 TYR239 TYR240 SER241 SER242 GLY243 TYR244 GLN245 VAL246 PRO247 VAL248 GLU249 ASP250 VAL251 THR252 GLY253 ALA254 GLY255 ASP256 ALA257 LEU258 GLY259 GLY260 THR261 PHE262 LEU263 SER264 LEU265 TYR266 TYR267 LYS268 GLY269 PHE270 GLU271 MET272 GLU273 LYS274 ALA275 LEU276 ASP277 TYR278 ALA279 ILE280 VAL281 ALA282 SER283 THR284 LEU285 ASN286 VAL287 MET288 ILE289 ARG290 GLY291 ASP292 GLN293 GLU294 ASN295 LEU296 PRO297 THR298 THR299 LYS300 ASP301 ILE302 GLU303 THR304 PHE305 LEU306 ARG307 GLU308 MET309 LYS310
Unit 5 ALA2 LYS3 LEU4 ILE5 THR6 LEU7 GLY8 GLU9 ILE10 LEU11 ILE12 GLU13 PHE14 ASN15 ALA16 LEU17 SER18 PRO19 GLY20 PRO21 LEU22 ARG23 HIS24 VAL25 SER26 TYR27 PHE28 GLU29 LYS30 HIS31 VAL32 ALA33 GLY34 SER35 GLU36 ALA37 ASN38 TYR39 CYS40 VAL41 ALA42 PHE43 ILE44 LYS45 GLN46 GLY47 ASN48 GLU49 CYS50 GLY51 ILE52 ILE53 ALA54 LYS55 VAL56 GLY57 ASP58 ASP59 GLU60 PHE61 GLY62 TYR63 ASN64 ALA65 ILE66 GLU67 TRP68 LEU69 ARG70 GLY71 GLN72 GLY73 VAL74 ASP75 VAL76 SER77 HIS78 MET79 LYS80 ILE81 ASP82 PRO83 SER84 ALA85 PRO86 THR87 GLY88 ILE89 PHE90 PHE91 ILE92 GLN93 ARG94 HIS95 TYR96 PRO97 VAL98 PRO99 LEU100 LYS101 SER102 GLU103 SER104 ILE105 TYR106 TYR107 ARG108 LYS109 GLY110 SER111 ALA112 GLY113 SER114 LYS115 LEU116 SER117 PRO118 GLU119 ASP120 VAL121 ASP122 GLU123 GLU124 TYR125 VAL126 LYS127 SER128 ALA129 ASP130 LEU131 VAL132 HIS133 SER134 SER135 GLY136 ILE137 THR138 LEU139 ALA140 ILE141 SER142 SER143 THR144 ALA145 LYS146 GLU147 ALA148 VAL149 TYR150 LYS151 ALA152 PHE153 GLU154 ILE155 ALA156 SER157 ASN158 ARG159 SER160 PHE161 ASP162 THR163 ASN164 ILE165 ARG166 LEU167 LYS168 LEU169 TRP170 SER171 ALA172 GLU173 GLU174 ALA175 LYS176 ARG177 GLU178 ILE179 LEU180 LYS181 LEU182 LEU183 SER184 LYS185 PHE186 HIS187 LEU188 LYS189 PHE190 LEU191 ILE192 THR193 ASP194 THR195 ASP196 ASP197 SER198 LYS199 ILE200 ILE201 LEU202 GLY203 GLU204 SER205 ASP206 PRO207 ASP208 LYS209 ALA210 ALA211 LYS212 ALA213 PHE214 SER215 ASP216 TYR217 ALA218 GLU219 ILE220 ILE221 VAL222 MET223 LYS224 LEU225 GLY226 PRO227 LYS228 GLY229 ALA230 ILE231 VAL232 TYR233 TYR234 ASP235 GLY236 LYS237 LYS238 TYR239 TYR240 SER241 SER242 GLY243 TYR244 GLN245 VAL246 PRO247 VAL248 GLU249 ASP250 VAL251 THR252 GLY253 ALA254 GLY255 ASP256 ALA257 LEU258 GLY259 GLY260 THR261 PHE262 LEU263 SER264 LEU265 TYR266 TYR267 LYS268 GLY269 PHE270 GLU271 MET272 GLU273 LYS274 ALA275 LEU276 ASP277 TYR278 ALA279 ILE280 VAL281 ALA282 SER283 THR284 LEU285 ASN286 VAL287 MET288 ILE289 ARG290 GLY291 ASP292 GLN293 GLU294 ASN295 LEU296 PRO297 THR298 THR299 LYS300 ASP301 ILE302 GLU303 THR304 PHE305 LEU306 ARG307 GLU308 MET309 LYS310
Unit 6 ALA2 LYS3 LEU4 ILE5 THR6 LEU7 GLY8 GLU9 ILE10 LEU11 ILE12 GLU13 PHE14 ASN15 ALA16 LEU17 SER18 PRO19 GLY20 PRO21 LEU22 ARG23 HIS24 VAL25 SER26 TYR27 PHE28 GLU29 LYS30 HIS31 VAL32 ALA33 GLY34 SER35 GLU36 ALA37 ASN38 TYR39 CYS40 VAL41 ALA42 PHE43 ILE44 LYS45 GLN46 GLY47 ASN48 GLU49 CYS50 GLY51 ILE52 ILE53 ALA54 LYS55 VAL56 GLY57 ASP58 ASP59 GLU60 PHE61 GLY62 TYR63 ASN64 ALA65 ILE66 GLU67 TRP68 LEU69 ARG70 GLY71 GLN72 GLY73 VAL74 ASP75 VAL76 SER77 HIS78 MET79 LYS80 ILE81 ASP82 PRO83 SER84 ALA85 PRO86 THR87 GLY88 ILE89 PHE90 PHE91 ILE92 GLN93 ARG94 HIS95 TYR96 PRO97 VAL98 PRO99 LEU100 LYS101 SER102 GLU103 SER104 ILE105 TYR106 TYR107 ARG108 LYS109 GLY110 SER111 ALA112 GLY113 SER114 LYS115 LEU116 SER117 PRO118 GLU119 ASP120 VAL121 ASP122 GLU123 GLU124 TYR125 VAL126 LYS127 SER128 ALA129 ASP130 LEU131 VAL132 HIS133 SER134 SER135 GLY136 ILE137 THR138 LEU139 ALA140 ILE141 SER142 SER143 THR144 ALA145 LYS146 GLU147 ALA148 VAL149 TYR150 LYS151 ALA152 PHE153 GLU154 ILE155 ALA156 SER157 ASN158 ARG159 SER160 PHE161 ASP162 THR163 ASN164 ILE165 ARG166 LEU167 LYS168 LEU169 TRP170 SER171 ALA172 GLU173 GLU174 ALA175 LYS176 ARG177 GLU178 ILE179 LEU180 LYS181 LEU182 LEU183 SER184 LYS185 PHE186 HIS187 LEU188 LYS189 PHE190 LEU191 ILE192 THR193 ASP194 THR195 ASP196 ASP197 SER198 LYS199 ILE200 ILE201 LEU202 GLY203 GLU204 SER205 ASP206 PRO207 ASP208 LYS209 ALA210 ALA211 LYS212 ALA213 PHE214 SER215 ASP216 TYR217 ALA218 GLU219 ILE220 ILE221 VAL222 MET223 LYS224 LEU225 GLY226 PRO227 LYS228 GLY229 ALA230 ILE231 VAL232 TYR233 TYR234 ASP235 GLY236 LYS237 LYS238 TYR239 TYR240 SER241 SER242 GLY243 TYR244 GLN245 VAL246 PRO247 VAL248 GLU249 ASP250 VAL251 THR252 GLY253 ALA254 GLY255 ASP256 ALA257 LEU258 GLY259 GLY260 THR261 PHE262 LEU263 SER264 LEU265 TYR266 TYR267 LYS268 GLY269 PHE270 GLU271 MET272 GLU273 LYS274 ALA275 LEU276 ASP277 TYR278 ALA279 ILE280 VAL281 ALA282 SER283 THR284 LEU285 ASN286 VAL287 MET288 ILE289 ARG290 GLY291 ASP292 GLN293 GLU294 ASN295 LEU296 PRO297 THR298 THR299 LYS300 ASP301 ILE302 GLU303 THR304 PHE305 LEU306 ARG307 GLU308 MET309 LYS310
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany