1WPQ - Sequence, Chains, Asymmetric and Biological Units

• Title: TERNARY COMPLEX OF GLYCEROL 3-PHOSPHATE DEHYDROGENASE 1 WITH NAD AND DIHYDROXYACTONE
• Keywords: NAD, GPD1, DEHYDROGENASE, DIHYDROXYACTONE COMPLEX, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1WPQ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD+], CYTOPLASMIC	A	348	2624	0
2	Protein	GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD+], CYTOPLASMIC	B	348	2624	0
3	Ligand	GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD+], CYTOPLASMIC	A	8	0	84
4	Ligand	GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD+], CYTOPLASMIC	B	3	0	59
5	Water			602	0	602
total				1309	5248	745

Proteins

Unit 1

ALA 2 SER 3 LYS 4 LYS 5 VAL 6 CYS 7 ILE 8 VAL 9 GLY 10 SER 11 GLY 12 ASN 13 TRP 14 GLY 15 SER 16 ALA 17 ILE 18 ALA 19 LYS 20 ILE 21 VAL 22 GLY 23 GLY 24 ASN 25 ALA 26 ALA 27 GLN 28 LEU 29 ALA 30 GLN 31 PHE 32 ASP 33 PRO 34 ARG 35 VAL 36 THR 37 MET 38 TRP 39 VAL 40 PHE 41 GLU 42 GLU 43 ASP 44 ILE 45 GLY 46 GLY 47 LYS 48 LYS 49 LEU 50 THR 51 GLU 52 ILE 53 ILE 54 ASN 55 THR 56 GLN 57 HIS 58 GLU 59 ASN 60 VAL 61 LYS 62 TYR 63 LEU 64 PRO 65 GLY 66 HIS 67 LYS 68 LEU 69 PRO 70 PRO 71 ASN 72 VAL 73 VAL 74 ALA 75 VAL 76 PRO 77 ASP 78 VAL 79 VAL 80 GLN 81 ALA 82 ALA 83 GLU 84 ASP 85 ALA 86 ASP 87 ILE 88 LEU 89 ILE 90 PHE 91 VAL 92 VAL 93 PRO 94 HIS 95 GLN 96 PHE 97 ILE 98 GLY 99 LYS 100 ILE 101 CYS 102 ASP 103 GLN 104 LEU 105 LYS 106 GLY 107 HIS 108 LEU 109 LYS 110 ALA 111 ASN 112 PRO 113 THR 114 GLY 115 ILE 116 SER 117 LEU 118 ILE 119 LYS 120 GLY 121 VAL 122 ASP 123 GLU 124 GLY 125 PRO 126 ASN 127 GLY 128 LEU 129 LYS 130 LEU 131 ILE 132 SER 133 GLU 134 VAL 135 ILE 136 GLY 137 GLU 138 ARG 139 LEU 140 GLY 141 ILE 142 PRO 143 MET 144 SER 145 VAL 146 LEU 147 MET 148 GLY 149 ALA 150 ASN 151 ILE 152 ALA 153 SER 154 GLU 155 VAL 156 ALA 157 ASP 158 GLU 159 LYS 160 PHE 161 CYS 162 GLU 163 THR 164 THR 165 ILE 166 GLY 167 CYS 168 LYS 169 ASP 170 PRO 171 ALA 172 GLN 173 GLY 174 GLN 175 LEU 176 LEU 177 LYS 178 GLU 179 LEU 180 MET 181 GLN 182 THR 183 PRO 184 ASN 185 PHE 186 ARG 187 ILE 188 THR 189 VAL 190 VAL 191 GLN 192 GLU 193 VAL 194 ASP 195 THR 196 VAL 197 GLU 198 ILE 199 CYS 200 GLY 201 ALA 202 LEU 203 LYS 204 ASN 205 VAL 206 VAL 207 ALA 208 VAL 209 GLY 210 ALA 211 GLY 212 PHE 213 CYS 214 ASP 215 GLY 216 LEU 217 GLY 218 PHE 219 GLY 220 ASP 221 ASN 222 THR 223 LYS 224 ALA 225 ALA 226 VAL 227 ILE 228 ARG 229 LEU 230 GLY 231 LEU 232 MET 233 GLU 234 MET 235 ILE 236 ALA 237 PHE 238 ALA 239 LYS 240 LEU 241 PHE 242 CYS 243 SER 244 GLY 245 PRO 246 VAL 247 SER 248 SER 249 ALA 250 THR 251 PHE 252 LEU 253 GLU 254 SER 255 CYS 256 GLY 257 VAL 258 ALA 259 ASP 260 LEU 261 ILE 262 THR 263 THR 264 CYS 265 TYR 266 GLY 267 GLY 268 ARG 269 ASN 270 ARG 271 LYS 272 VAL 273 ALA 274 GLU 275 ALA 276 PHE 277 ALA 278 ARG 279 THR 280 GLY 281 LYS 282 SER 283 ILE 284 GLU 285 GLN 286 LEU 287 GLU 288 LYS 289 GLU 290 LEU 291 LEU 292 ASN 293 GLY 294 GLN 295 LYS 296 LEU 297 GLN 298 GLY 299 PRO 300 GLU 301 THR 302 ALA 303 ARG 304 GLU 305 LEU 306 TYR 307 SER 308 ILE 309 LEU 310 GLN 311 HIS 312 LYS 313 GLY 314 LEU 315 VAL 316 ASP 317 LYS 318 PHE 319 PRO 320 LEU 321 PHE 322 MET 323 ALA 324 VAL 325 TYR 326 LYS 327 VAL 328 CYS 329 TYR 330 GLU 331 GLY 332 GLN 333 PRO 334 VAL 335 GLY 336 GLU 337 PHE 338 ILE 339 HIS 340 CYS 341 LEU 342 GLN 343 ASN 344 HIS 345 PRO 346 GLU 347 HIS 348 MET 349

Unit 2

ALA 2 SER 3 LYS 4 LYS 5 VAL 6 CYS 7 ILE 8 VAL 9 GLY 10 SER 11 GLY 12 ASN 13 TRP 14 GLY 15 SER 16 ALA 17 ILE 18 ALA 19 LYS 20 ILE 21 VAL 22 GLY 23 GLY 24 ASN 25 ALA 26 ALA 27 GLN 28 LEU 29 ALA 30 GLN 31 PHE 32 ASP 33 PRO 34 ARG 35 VAL 36 THR 37 MET 38 TRP 39 VAL 40 PHE 41 GLU 42 GLU 43 ASP 44 ILE 45 GLY 46 GLY 47 LYS 48 LYS 49 LEU 50 THR 51 GLU 52 ILE 53 ILE 54 ASN 55 THR 56 GLN 57 HIS 58 GLU 59 ASN 60 VAL 61 LYS 62 TYR 63 LEU 64 PRO 65 GLY 66 HIS 67 LYS 68 LEU 69 PRO 70 PRO 71 ASN 72 VAL 73 VAL 74 ALA 75 VAL 76 PRO 77 ASP 78 VAL 79 VAL 80 GLN 81 ALA 82 ALA 83 GLU 84 ASP 85 ALA 86 ASP 87 ILE 88 LEU 89 ILE 90 PHE 91 VAL 92 VAL 93 PRO 94 HIS 95 GLN 96 PHE 97 ILE 98 GLY 99 LYS 100 ILE 101 CYS 102 ASP 103 GLN 104 LEU 105 LYS 106 GLY 107 HIS 108 LEU 109 LYS 110 ALA 111 ASN 112 PRO 113 THR 114 GLY 115 ILE 116 SER 117 LEU 118 ILE 119 LYS 120 GLY 121 VAL 122 ASP 123 GLU 124 GLY 125 PRO 126 ASN 127 GLY 128 LEU 129 LYS 130 LEU 131 ILE 132 SER 133 GLU 134 VAL 135 ILE 136 GLY 137 GLU 138 ARG 139 LEU 140 GLY 141 ILE 142 PRO 143 MET 144 SER 145 VAL 146 LEU 147 MET 148 GLY 149 ALA 150 ASN 151 ILE 152 ALA 153 SER 154 GLU 155 VAL 156 ALA 157 ASP 158 GLU 159 LYS 160 PHE 161 CYS 162 GLU 163 THR 164 THR 165 ILE 166 GLY 167 CYS 168 LYS 169 ASP 170 PRO 171 ALA 172 GLN 173 GLY 174 GLN 175 LEU 176 LEU 177 LYS 178 GLU 179 LEU 180 MET 181 GLN 182 THR 183 PRO 184 ASN 185 PHE 186 ARG 187 ILE 188 THR 189 VAL 190 VAL 191 GLN 192 GLU 193 VAL 194 ASP 195 THR 196 VAL 197 GLU 198 ILE 199 CYS 200 GLY 201 ALA 202 LEU 203 LYS 204 ASN 205 VAL 206 VAL 207 ALA 208 VAL 209 GLY 210 ALA 211 GLY 212 PHE 213 CYS 214 ASP 215 GLY 216 LEU 217 GLY 218 PHE 219 GLY 220 ASP 221 ASN 222 THR 223 LYS 224 ALA 225 ALA 226 VAL 227 ILE 228 ARG 229 LEU 230 GLY 231 LEU 232 MET 233 GLU 234 MET 235 ILE 236 ALA 237 PHE 238 ALA 239 LYS 240 LEU 241 PHE 242 CYS 243 SER 244 GLY 245 PRO 246 VAL 247 SER 248 SER 249 ALA 250 THR 251 PHE 252 LEU 253 GLU 254 SER 255 CYS 256 GLY 257 VAL 258 ALA 259 ASP 260 LEU 261 ILE 262 THR 263 THR 264 CYS 265 TYR 266 GLY 267 GLY 268 ARG 269 ASN 270 ARG 271 LYS 272 VAL 273 ALA 274 GLU 275 ALA 276 PHE 277 ALA 278 ARG 279 THR 280 GLY 281 LYS 282 SER 283 ILE 284 GLU 285 GLN 286 LEU 287 GLU 288 LYS 289 GLU 290 LEU 291 LEU 292 ASN 293 GLY 294 GLN 295 LYS 296 LEU 297 GLN 298 GLY 299 PRO 300 GLU 301 THR 302 ALA 303 ARG 304 GLU 305 LEU 306 TYR 307 SER 308 ILE 309 LEU 310 GLN 311 HIS 312 LYS 313 GLY 314 LEU 315 VAL 316 ASP 317 LYS 318 PHE 319 PRO 320 LEU 321 PHE 322 MET 323 ALA 324 VAL 325 TYR 326 LYS 327 VAL 328 CYS 329 TYR 330 GLU 331 GLY 332 GLN 333 PRO 334 VAL 335 GLY 336 GLU 337 PHE 338 ILE 339 HIS 340 CYS 341 LEU 342 GLN 343 ASN 344 HIS 345 PRO 346 GLU 347 HIS 348 MET 349

Ligands

Unit 3	SO4 1001 SO4 1002 SO4 1003 SO4 1004 SO4 1006 SO4 1007 13P 2002 NAD 3001
Unit 4	SO4 1005 13P 2001 NAD 3002