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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LEUCYL-TRNA SYNTHETASE FROM THE ARCHAEON PYROCOCCUS HORIKOSHII REVEALS A NOVEL EDITING DOMAIN ORIENTATION
Keywords LEUCYL-TRNA SYNTHETASE, LEUCINE, AMINOACYL-TRNA, EDITING, AMINO ACID, AMINOACYLATION, PYROCOCCUS HORIKOSHII, TRNALEU, STRUCTURAL GENOMICS, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, LIGASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1WKB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LEUCYL-TRNA SYNTHETASE  A 791 6610 0
2  Ligand   LEUCYL-TRNA SYNTHETASE  A 8 0 40
3 Water     825 0 825
total       1624 6610 865

Proteins
Unit 1 LEU4 ASN5 PHE6 LYS7 ALA8 ILE9 GLU10 GLU11 LYS12 TRP13 GLN14 LYS15 ARG16 TRP17 LEU18 GLU19 ALA20 LYS21 ILE22 PHE23 GLU24 PRO25 ASN26 ILE27 ARG28 ASP29 LYS30 PRO31 LYS32 GLU33 LYS34 LYS35 PHE36 TYR37 ILE38 THR39 VAL40 ALA41 PHE42 PRO43 TYR44 LEU45 SER46 GLY47 HIS48 LEU49 HIS50 VAL51 GLY52 HIS53 ALA54 ARG55 THR56 TYR57 THR58 ILE59 PRO60 ASP61 VAL62 ILE63 ALA64 ARG65 PHE66 LYS67 ARG68 MET69 GLN70 GLY71 TYR72 ASN73 VAL74 LEU75 PHE76 PRO77 MET78 ALA79 TRP80 HIS81 ILE82 THR83 GLY84 SER85 PRO86 ILE87 VAL88 GLY89 ILE90 ALA91 GLU92 ARG93 ILE94 LYS95 ASN96 ARG97 ASP98 PRO99 LYS100 THR101 ILE102 TRP103 ILE104 TYR105 ARG106 ASP107 VAL108 TYR109 LYS110 VAL111 PRO112 GLU113 GLU114 ILE115 LEU116 TRP117 THR118 PHE119 GLU120 ASP121 PRO122 ILE123 ASN124 ILE125 VAL126 LYS127 TYR128 PHE129 MET130 LYS131 ALA132 ALA133 LYS134 GLU135 THR136 PHE137 ILE138 ARG139 ALA140 GLY141 PHE142 SER143 VAL144 ASP145 TRP146 SER147 ARG148 GLU149 PHE150 TYR151 THR152 THR153 SER154 LEU155 PHE156 PRO157 PRO158 PHE159 SER160 LYS161 PHE162 ILE163 GLU164 TRP165 GLN166 PHE167 TRP168 LYS169 LEU170 LYS171 GLU172 LYS173 GLY174 TYR175 ILE176 VAL177 LYS178 GLY179 ALA180 HIS181 ARG182 VAL183 ARG184 TRP185 ASP186 PRO187 VAL188 VAL189 GLY190 THR191 PRO192 LEU193 GLY194 ASP195 HIS196 ASP197 LEU198 MET199 GLU200 GLY201 GLU202 ASP203 VAL204 PRO205 ILE206 LEU207 ASP208 TYR209 ILE210 ILE211 ILE212 LYS213 PHE214 GLU215 LEU216 ARG217 GLU218 ASN219 GLY220 GLU221 VAL222 ILE223 TYR224 LEU225 PRO226 ALA227 ALA228 THR229 LEU230 ARG231 PRO232 GLU233 THR234 VAL235 TYR236 GLY237 VAL238 THR239 ASN240 MET241 TRP242 VAL243 ASN244 PRO245 ASN246 ALA247 THR248 TYR249 VAL250 LYS251 ALA252 LYS253 VAL254 ARG255 ARG256 LYS257 ASP258 LYS259 GLU260 GLU261 THR262 TRP263 ILE264 VAL265 SER266 LYS267 GLU268 ALA269 ALA270 TYR271 LYS272 LEU273 SER274 PHE275 GLN276 ASP277 ARG278 GLU279 ILE280 GLU281 VAL282 ILE283 GLU284 GLU285 PHE286 LYS287 GLY288 GLU289 LYS290 LEU291 ILE292 GLY293 LYS294 TYR295 VAL296 ARG297 ASN298 PRO299 VAL300 SER301 GLY302 ASP303 GLU304 VAL305 ILE306 ILE307 LEU308 PRO309 ALA310 GLU311 PHE312 VAL313 ASP314 PRO315 ASP316 ASN317 ALA318 THR319 GLY320 VAL321 VAL322 MET323 SER324 VAL325 PRO326 ALA327 HIS328 ALA329 PRO330 PHE331 ASP332 HIS333 VAL334 ALA335 LEU336 GLU337 ASP338 LEU339 LYS340 ARG341 GLU342 THR343 GLU344 ILE345 LEU346 GLU347 LYS348 TYR349 ASP350 ILE351 ASP352 PRO353 ARG354 ILE355 VAL356 PHE373 PRO374 ALA375 VAL376 GLU377 GLU378 VAL379 ASN380 LYS381 LEU382 GLY383 ILE384 LYS385 SER386 GLN387 LYS388 ASP389 LYS390 GLU391 LYS392 LEU393 GLU394 GLN395 ALA396 THR397 LYS398 THR399 ILE400 TYR401 LYS402 ALA403 GLU404 TYR405 HIS406 LYS407 GLY408 ILE409 PHE410 LYS411 VAL412 PRO413 PRO414 TYR415 GLU416 GLY417 LYS418 PRO419 VAL420 GLN421 GLU422 VAL423 LYS424 GLU425 ALA426 ILE427 ALA428 LYS429 GLU430 MET431 LEU432 GLU433 LYS434 GLY435 ILE436 ALA437 GLU438 ILE439 MET440 TYR441 GLU442 PHE443 ALA444 GLU445 LYS446 ASN447 VAL448 ILE449 SER450 ARG451 PHE452 GLY453 ASN454 ARG455 ALA456 VAL457 ILE458 LYS459 ILE460 ILE461 HIS462 ASP463 GLN464 TRP465 PHE466 ILE467 ASP468 TYR469 GLY470 ASN471 PRO472 GLU473 TRP474 LYS475 GLU476 LYS477 ALA478 ARG479 LYS480 ALA481 LEU482 GLU483 ARG484 MET485 LYS486 ILE487 LEU488 PRO489 GLU490 THR491 ARG492 ARG493 ALA494 GLN495 PHE496 GLU497 ALA498 ILE499 ILE500 ASP501 TRP502 LEU503 ASP504 LYS505 LYS506 ALA507 CYS508 ALA509 ARG510 LYS511 ILE512 GLY513 LEU514 GLY515 THR516 PRO517 LEU518 PRO519 TRP520 ASP521 PRO522 GLU523 TRP524 VAL525 ILE526 GLU527 SER528 LEU529 SER530 ASP531 SER532 THR533 ILE534 TYR535 MET536 ALA537 TYR538 TYR539 THR540 ILE541 SER542 ARG543 HIS544 ILE545 ASN546 LYS547 LEU548 ARG549 GLN550 GLU551 GLY552 LYS553 LEU554 ASP555 PRO556 GLU557 LYS558 LEU559 THR560 PRO561 GLU562 PHE563 PHE564 ASP565 TYR566 ILE567 PHE568 LEU569 GLU570 GLU571 PHE572 SER573 GLU574 ASP575 LYS576 GLU577 LYS578 GLU579 LEU580 GLU581 LYS582 LYS583 THR584 GLY585 ILE586 PRO587 ALA588 GLU589 ILE590 ILE591 HIS592 GLU593 MET594 LYS595 GLU596 GLU597 PHE598 GLU599 TYR600 TRP601 TYR602 PRO603 LEU604 ASP605 TRP606 ARG607 CYS608 SER609 GLY610 LYS611 ASP612 LEU613 ILE614 PRO615 ASN616 HIS617 LEU618 THR619 PHE620 PHE621 ILE622 PHE623 ASN624 HIS625 VAL626 ALA627 ILE628 PHE629 ARG630 GLU631 GLU632 HIS633 TRP634 PRO635 LYS636 GLY637 ILE638 ALA639 VAL640 ASN641 GLY642 PHE643 GLY644 THR645 LEU646 GLU647 GLY648 GLN649 LYS650 MET651 SER652 LYS653 SER654 LYS655 GLY656 ASN657 VAL658 LEU659 ASN660 PHE661 ILE662 ASP663 ALA664 ILE665 GLU666 GLU667 ASN668 GLY669 ALA670 ASP671 VAL672 VAL673 ARG674 LEU675 TYR676 ILE677 MET678 SER679 LEU680 ALA681 GLU682 HIS683 ASP684 SER685 ASP686 PHE687 ASP688 TRP689 ARG690 ARG691 LYS692 GLU693 VAL694 GLY695 LYS696 LEU697 ARG698 LYS699 GLN700 ILE701 GLU702 ARG703 PHE704 TYR705 GLU706 LEU707 ILE708 SER709 GLN710 PHE711 ALA712 GLU713 TYR714 GLU715 VAL716 LYS717 GLY718 ASN719 VAL720 GLU721 LEU722 LYS723 ASP724 ILE725 ASP726 ARG727 TRP728 MET729 LEU730 HIS731 ARG732 LEU733 ASN734 LYS735 ALA736 ILE737 LYS738 GLU739 THR740 THR741 ASN742 ALA743 LEU744 GLU745 GLU746 PHE747 ARG748 THR749 ARG750 THR751 ALA752 VAL753 GLN754 TRP755 ALA756 PHE757 TYR758 SER759 ILE760 MET761 ASN762 ASP763 LEU764 ARG765 TRP766 TYR767 LEU768 ARG769 ARG770 THR771 GLU772 GLY773 ARG774 ASP775 ASP776 GLU777 ALA778 LYS779 ARG780 TYR781 VAL782 LEU783 ARG784 THR785 LEU786 ALA787 ASP788 VAL789 TRP790 VAL791 ARG792 LEU793 MET794 ALA795 PRO796 PHE797 THR798 PRO799 HIS800 ILE801 CYS802 GLU803 GLU804 LEU805 TRP806 GLU807 LYS808 LEU809 GLY810

Ligands
Unit 2 SO4901 SO4902 SO4903 SO4904 SO4905 SO4906 SO4907 SO4908

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany