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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE AND MUTATIONAL ANALYSIS OF A PLANT MITOCHONDRIAL N DIPHOSPHATE KINASE: IDENTIFICATION OF RESIDUES INVOLVED IN PHOSPHORYLATION AND OLIGOMERIZATION.
Keywords MITOCHONDRIAL NUCLEOSIDE DIPHOSPHATE KINASE, NDPK3, PISUM SA TRANSFERASE, KINASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1W7W     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  A 151 1191 0
2  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  B 150 1187 0
3  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  C 151 1191 0
4  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  D 150 1187 0
5  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  E 151 1191 0
6  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  F 150 1187 0
7 Water     54 0 54
total       957 7134 54

Proteins
Unit 1 ALA1 GLU2 LEU3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 ILE10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 GLY18 LEU19 ILE20 SER21 GLU22 ILE23 ILE24 SER25 ARG26 PHE27 GLU28 ARG29 LYS30 GLY31 PHE32 LYS33 LEU34 VAL35 GLY36 ILE37 LYS38 VAL39 LEU40 ILE41 PRO42 THR43 LYS44 GLN45 PHE46 ALA47 GLN48 GLN49 HIS50 TYR51 HIS52 ASP53 LEU54 LYS55 GLU56 ARG57 PRO58 PHE59 PHE60 ASN61 GLY62 LEU63 CYS64 ASP65 PHE66 LEU67 SER68 SER69 GLY70 PRO71 VAL72 ILE73 ALA74 MET75 VAL76 TRP77 GLU78 GLY79 GLU80 GLY81 VAL82 ILE83 THR84 TYR85 GLY86 ARG87 LYS88 LEU89 ILE90 GLY91 ALA92 THR93 ASP94 PRO95 GLN96 LYS97 SER98 ALA99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 LEU107 ALA108 VAL109 VAL110 VAL111 GLY112 ARG113 ASN114 ILE115 ILE116 HIS117 GLY118 SER119 ASP120 GLY121 PRO122 GLU123 THR124 ALA125 LYS126 ASP127 GLU128 ILE129 LYS130 LEU131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 SER140 PHE141 THR142 SER143 ASN144 SER145 GLU146 LYS147 TRP148 ILE149 TYR150 GLY151
Unit 2 ALA1 GLU2 LEU3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 ILE10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 GLY18 LEU19 ILE20 SER21 GLU22 ILE23 ILE24 SER25 ARG26 PHE27 GLU28 ARG29 LYS30 GLY31 PHE32 LYS33 LEU34 VAL35 GLY36 ILE37 LYS38 VAL39 LEU40 ILE41 PRO42 THR43 LYS44 GLN45 PHE46 ALA47 GLN48 GLN49 HIS50 TYR51 HIS52 ASP53 LEU54 LYS55 GLU56 ARG57 PRO58 PHE59 PHE60 ASN61 GLY62 LEU63 CYS64 ASP65 PHE66 LEU67 SER68 SER69 GLY70 PRO71 VAL72 ILE73 ALA74 MET75 VAL76 TRP77 GLU78 GLY79 GLU80 GLY81 VAL82 ILE83 THR84 TYR85 GLY86 ARG87 LYS88 LEU89 ILE90 GLY91 ALA92 THR93 ASP94 PRO95 GLN96 LYS97 SER98 ALA99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 LEU107 ALA108 VAL109 VAL110 VAL111 GLY112 ARG113 ASN114 ILE115 ILE116 HIS117 GLY118 SER119 ASP120 GLY121 PRO122 GLU123 THR124 ALA125 LYS126 ASP127 GLU128 ILE129 LYS130 LEU131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 SER140 PHE141 THR142 SER143 ASN144 SER145 GLU146 LYS147 TRP148 ILE149 TYR150
Unit 3 ALA1 GLU2 LEU3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 ILE10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 GLY18 LEU19 ILE20 SER21 GLU22 ILE23 ILE24 SER25 ARG26 PHE27 GLU28 ARG29 LYS30 GLY31 PHE32 LYS33 LEU34 VAL35 GLY36 ILE37 LYS38 VAL39 LEU40 ILE41 PRO42 THR43 LYS44 GLN45 PHE46 ALA47 GLN48 GLN49 HIS50 TYR51 HIS52 ASP53 LEU54 LYS55 GLU56 ARG57 PRO58 PHE59 PHE60 ASN61 GLY62 LEU63 CYS64 ASP65 PHE66 LEU67 SER68 SER69 GLY70 PRO71 VAL72 ILE73 ALA74 MET75 VAL76 TRP77 GLU78 GLY79 GLU80 GLY81 VAL82 ILE83 THR84 TYR85 GLY86 ARG87 LYS88 LEU89 ILE90 GLY91 ALA92 THR93 ASP94 PRO95 GLN96 LYS97 SER98 ALA99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 LEU107 ALA108 VAL109 VAL110 VAL111 GLY112 ARG113 ASN114 ILE115 ILE116 HIS117 GLY118 SER119 ASP120 GLY121 PRO122 GLU123 THR124 ALA125 LYS126 ASP127 GLU128 ILE129 LYS130 LEU131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 SER140 PHE141 THR142 SER143 ASN144 SER145 GLU146 LYS147 TRP148 ILE149 TYR150 GLY151
Unit 4 ALA1 GLU2 LEU3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 ILE10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 GLY18 LEU19 ILE20 SER21 GLU22 ILE23 ILE24 SER25 ARG26 PHE27 GLU28 ARG29 LYS30 GLY31 PHE32 LYS33 LEU34 VAL35 GLY36 ILE37 LYS38 VAL39 LEU40 ILE41 PRO42 THR43 LYS44 GLN45 PHE46 ALA47 GLN48 GLN49 HIS50 TYR51 HIS52 ASP53 LEU54 LYS55 GLU56 ARG57 PRO58 PHE59 PHE60 ASN61 GLY62 LEU63 CYS64 ASP65 PHE66 LEU67 SER68 SER69 GLY70 PRO71 VAL72 ILE73 ALA74 MET75 VAL76 TRP77 GLU78 GLY79 GLU80 GLY81 VAL82 ILE83 THR84 TYR85 GLY86 ARG87 LYS88 LEU89 ILE90 GLY91 ALA92 THR93 ASP94 PRO95 GLN96 LYS97 SER98 ALA99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 LEU107 ALA108 VAL109 VAL110 VAL111 GLY112 ARG113 ASN114 ILE115 ILE116 HIS117 GLY118 SER119 ASP120 GLY121 PRO122 GLU123 THR124 ALA125 LYS126 ASP127 GLU128 ILE129 LYS130 LEU131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 SER140 PHE141 THR142 SER143 ASN144 SER145 GLU146 LYS147 TRP148 ILE149 TYR150
Unit 5 ALA1 GLU2 LEU3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 ILE10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 GLY18 LEU19 ILE20 SER21 GLU22 ILE23 ILE24 SER25 ARG26 PHE27 GLU28 ARG29 LYS30 GLY31 PHE32 LYS33 LEU34 VAL35 GLY36 ILE37 LYS38 VAL39 LEU40 ILE41 PRO42 THR43 LYS44 GLN45 PHE46 ALA47 GLN48 GLN49 HIS50 TYR51 HIS52 ASP53 LEU54 LYS55 GLU56 ARG57 PRO58 PHE59 PHE60 ASN61 GLY62 LEU63 CYS64 ASP65 PHE66 LEU67 SER68 SER69 GLY70 PRO71 VAL72 ILE73 ALA74 MET75 VAL76 TRP77 GLU78 GLY79 GLU80 GLY81 VAL82 ILE83 THR84 TYR85 GLY86 ARG87 LYS88 LEU89 ILE90 GLY91 ALA92 THR93 ASP94 PRO95 GLN96 LYS97 SER98 ALA99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 LEU107 ALA108 VAL109 VAL110 VAL111 GLY112 ARG113 ASN114 ILE115 ILE116 HIS117 GLY118 SER119 ASP120 GLY121 PRO122 GLU123 THR124 ALA125 LYS126 ASP127 GLU128 ILE129 LYS130 LEU131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 SER140 PHE141 THR142 SER143 ASN144 SER145 GLU146 LYS147 TRP148 ILE149 TYR150 GLY151
Unit 6 ALA1 GLU2 LEU3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 ILE10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 GLY18 LEU19 ILE20 SER21 GLU22 ILE23 ILE24 SER25 ARG26 PHE27 GLU28 ARG29 LYS30 GLY31 PHE32 LYS33 LEU34 VAL35 GLY36 ILE37 LYS38 VAL39 LEU40 ILE41 PRO42 THR43 LYS44 GLN45 PHE46 ALA47 GLN48 GLN49 HIS50 TYR51 HIS52 ASP53 LEU54 LYS55 GLU56 ARG57 PRO58 PHE59 PHE60 ASN61 GLY62 LEU63 CYS64 ASP65 PHE66 LEU67 SER68 SER69 GLY70 PRO71 VAL72 ILE73 ALA74 MET75 VAL76 TRP77 GLU78 GLY79 GLU80 GLY81 VAL82 ILE83 THR84 TYR85 GLY86 ARG87 LYS88 LEU89 ILE90 GLY91 ALA92 THR93 ASP94 PRO95 GLN96 LYS97 SER98 ALA99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 LEU107 ALA108 VAL109 VAL110 VAL111 GLY112 ARG113 ASN114 ILE115 ILE116 HIS117 GLY118 SER119 ASP120 GLY121 PRO122 GLU123 THR124 ALA125 LYS126 ASP127 GLU128 ILE129 LYS130 LEU131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 SER140 PHE141 THR142 SER143 ASN144 SER145 GLU146 LYS147 TRP148 ILE149 TYR150

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany