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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 3-DEOXY-D-ARABINO-HEPTULOSONATE-7- PHOSPHATE SYNTHASE (DAHP SYNTHASE) FROM AEROPYRUM PERNIX IN COMPLEX WITH MN2+ AND PEP
Keywords (BETA/ALPHA)8 BARREL, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1VS1     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  A 270 2052 0
2  Protein   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  B 267 2036 0
3  Protein   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  C 268 2040 0
4  Protein   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  D 271 2059 0
5  Ligand   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  A 2 0 11
6  Ligand   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  B 2 0 11
7  Ligand   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  C 2 0 11
8  Ligand   3-DEOXY-7-PHOSPHOHEPTULONATE SYNTHASE  D 2 0 11
9 Water     191 0 191
total       1275 8187 235

Proteins
Unit 1 VAL7 ALA8 GLY9 PHE10 LYS11 GLY12 VAL13 LYS14 LEU15 ALA16 LEU17 LYS18 SER19 GLU20 GLU21 ARG22 ARG23 GLU24 THR25 VAL26 VAL27 GLU28 VAL29 GLU30 GLY31 VAL32 ARG33 ILE34 GLY35 GLY36 GLY37 SER38 LYS39 ALA40 VAL41 ILE42 ALA43 GLY44 PRO45 CYS46 SER47 VAL48 GLU49 SER50 TRP51 GLU52 GLN53 VAL54 ARG55 GLU56 ALA57 ALA58 LEU59 ALA60 VAL61 LYS62 GLU63 ALA64 GLY65 ALA66 HIS67 MET68 LEU69 ARG70 GLY71 GLY72 ALA73 PHE74 LYS75 PRO76 ARG77 THR78 SER79 PRO80 TYR81 SER82 PHE83 GLN84 GLY85 LEU86 GLY87 LEU88 GLU89 GLY90 LEU91 LYS92 LEU93 LEU94 ARG95 ARG96 ALA97 GLY98 ASP99 GLU100 ALA101 GLY102 LEU103 PRO104 VAL105 VAL106 THR107 GLU108 VAL109 LEU110 ASP111 PRO112 ARG113 HIS114 VAL115 GLU116 THR117 VAL118 SER119 ARG120 TYR121 ALA122 ASP123 MET124 LEU125 GLN126 ILE127 GLY128 ALA129 ARG130 ASN131 MET132 GLN133 ASN134 PHE135 PRO136 LEU137 LEU138 ARG139 GLU140 VAL141 GLY142 ARG143 SER144 GLY145 LYS146 PRO147 VAL148 LEU149 LEU150 LYS151 ARG152 GLY153 PHE154 GLY155 ASN156 THR157 VAL158 GLU159 GLU160 LEU161 LEU162 ALA163 ALA164 ALA165 GLU166 TYR167 ILE168 LEU169 LEU170 GLU171 GLY172 ASN173 TRP174 GLN175 VAL176 VAL177 LEU178 VAL179 GLU180 ARG181 GLY182 ILE183 ARG184 THR185 PHE186 GLU187 PRO188 SER189 THR190 ARG191 PHE192 THR193 LEU194 ASP195 VAL196 ALA197 ALA198 VAL199 ALA200 VAL201 LEU202 LYS203 GLU204 ALA205 THR206 HIS207 LEU208 PRO209 VAL210 ILE211 VAL212 ASP213 PRO214 SER215 HIS216 PRO217 ALA218 GLY219 ARG220 ARG221 SER222 LEU223 VAL224 PRO225 ALA226 LEU227 ALA228 LYS229 ALA230 GLY231 LEU232 ALA233 ALA234 GLY235 ALA236 ASP237 GLY238 LEU239 ILE240 VAL241 GLU242 VAL243 HIS244 PRO245 ASN246 PRO247 GLU248 GLU249 ALA250 LEU251 SER252 ASP253 ALA254 LYS255 GLN256 GLN257 LEU258 THR259 PRO260 GLY261 GLU262 PHE263 ALA264 ARG265 LEU266 MET267 GLY268 GLU269 LEU270 ARG271 TRP272 HIS273 ARG274 LEU275 LEU276
Unit 2 PHE10 LYS11 GLY12 VAL13 LYS14 LEU15 ALA16 LEU17 LYS18 SER19 GLU20 GLU21 ARG22 ARG23 GLU24 THR25 VAL26 VAL27 GLU28 VAL29 GLU30 GLY31 VAL32 ARG33 ILE34 GLY35 GLY36 GLY37 SER38 LYS39 ALA40 VAL41 ILE42 ALA43 GLY44 PRO45 CYS46 SER47 VAL48 GLU49 SER50 TRP51 GLU52 GLN53 VAL54 ARG55 GLU56 ALA57 ALA58 LEU59 ALA60 VAL61 LYS62 GLU63 ALA64 GLY65 ALA66 HIS67 MET68 LEU69 ARG70 GLY71 GLY72 ALA73 PHE74 LYS75 PRO76 ARG77 THR78 SER79 PRO80 TYR81 SER82 PHE83 GLN84 GLY85 LEU86 GLY87 LEU88 GLU89 GLY90 LEU91 LYS92 LEU93 LEU94 ARG95 ARG96 ALA97 GLY98 ASP99 GLU100 ALA101 GLY102 LEU103 PRO104 VAL105 VAL106 THR107 GLU108 VAL109 LEU110 ASP111 PRO112 ARG113 HIS114 VAL115 GLU116 THR117 VAL118 SER119 ARG120 TYR121 ALA122 ASP123 MET124 LEU125 GLN126 ILE127 GLY128 ALA129 ARG130 ASN131 MET132 GLN133 ASN134 PHE135 PRO136 LEU137 LEU138 ARG139 GLU140 VAL141 GLY142 ARG143 SER144 GLY145 LYS146 PRO147 VAL148 LEU149 LEU150 LYS151 ARG152 GLY153 PHE154 GLY155 ASN156 THR157 VAL158 GLU159 GLU160 LEU161 LEU162 ALA163 ALA164 ALA165 GLU166 TYR167 ILE168 LEU169 LEU170 GLU171 GLY172 ASN173 TRP174 GLN175 VAL176 VAL177 LEU178 VAL179 GLU180 ARG181 GLY182 ILE183 ARG184 THR185 PHE186 GLU187 PRO188 SER189 THR190 ARG191 PHE192 THR193 LEU194 ASP195 VAL196 ALA197 ALA198 VAL199 ALA200 VAL201 LEU202 LYS203 GLU204 ALA205 THR206 HIS207 LEU208 PRO209 VAL210 ILE211 VAL212 ASP213 PRO214 SER215 HIS216 PRO217 ALA218 GLY219 ARG220 ARG221 SER222 LEU223 VAL224 PRO225 ALA226 LEU227 ALA228 LYS229 ALA230 GLY231 LEU232 ALA233 ALA234 GLY235 ALA236 ASP237 GLY238 LEU239 ILE240 VAL241 GLU242 VAL243 HIS244 PRO245 ASN246 PRO247 GLU248 GLU249 ALA250 LEU251 SER252 ASP253 ALA254 LYS255 GLN256 GLN257 LEU258 THR259 PRO260 GLY261 GLU262 PHE263 ALA264 ARG265 LEU266 MET267 GLY268 GLU269 LEU270 ARG271 TRP272 HIS273 ARG274 LEU275 LEU276
Unit 3 GLY9 PHE10 LYS11 GLY12 VAL13 LYS14 LEU15 ALA16 LEU17 LYS18 SER19 GLU20 GLU21 ARG22 ARG23 GLU24 THR25 VAL26 VAL27 GLU28 VAL29 GLU30 GLY31 VAL32 ARG33 ILE34 GLY35 GLY36 GLY37 SER38 LYS39 ALA40 VAL41 ILE42 ALA43 GLY44 PRO45 CYS46 SER47 VAL48 GLU49 SER50 TRP51 GLU52 GLN53 VAL54 ARG55 GLU56 ALA57 ALA58 LEU59 ALA60 VAL61 LYS62 GLU63 ALA64 GLY65 ALA66 HIS67 MET68 LEU69 ARG70 GLY71 GLY72 ALA73 PHE74 LYS75 PRO76 ARG77 THR78 SER79 PRO80 TYR81 SER82 PHE83 GLN84 GLY85 LEU86 GLY87 LEU88 GLU89 GLY90 LEU91 LYS92 LEU93 LEU94 ARG95 ARG96 ALA97 GLY98 ASP99 GLU100 ALA101 GLY102 LEU103 PRO104 VAL105 VAL106 THR107 GLU108 VAL109 LEU110 ASP111 PRO112 ARG113 HIS114 VAL115 GLU116 THR117 VAL118 SER119 ARG120 TYR121 ALA122 ASP123 MET124 LEU125 GLN126 ILE127 GLY128 ALA129 ARG130 ASN131 MET132 GLN133 ASN134 PHE135 PRO136 LEU137 LEU138 ARG139 GLU140 VAL141 GLY142 ARG143 SER144 GLY145 LYS146 PRO147 VAL148 LEU149 LEU150 LYS151 ARG152 GLY153 PHE154 GLY155 ASN156 THR157 VAL158 GLU159 GLU160 LEU161 LEU162 ALA163 ALA164 ALA165 GLU166 TYR167 ILE168 LEU169 LEU170 GLU171 GLY172 ASN173 TRP174 GLN175 VAL176 VAL177 LEU178 VAL179 GLU180 ARG181 GLY182 ILE183 ARG184 THR185 PHE186 GLU187 PRO188 SER189 THR190 ARG191 PHE192 THR193 LEU194 ASP195 VAL196 ALA197 ALA198 VAL199 ALA200 VAL201 LEU202 LYS203 GLU204 ALA205 THR206 HIS207 LEU208 PRO209 VAL210 ILE211 VAL212 ASP213 PRO214 SER215 HIS216 PRO217 ALA218 GLY219 ARG220 ARG221 SER222 LEU223 VAL224 PRO225 ALA226 LEU227 ALA228 LYS229 ALA230 GLY231 LEU232 ALA233 ALA234 GLY235 ALA236 ASP237 GLY238 LEU239 ILE240 VAL241 GLU242 VAL243 HIS244 PRO245 ASN246 PRO247 GLU248 GLU249 ALA250 LEU251 SER252 ASP253 ALA254 LYS255 GLN256 GLN257 LEU258 THR259 PRO260 GLY261 GLU262 PHE263 ALA264 ARG265 LEU266 MET267 GLY268 GLU269 LEU270 ARG271 TRP272 HIS273 ARG274 LEU275 LEU276
Unit 4 PRO6 VAL7 ALA8 GLY9 PHE10 LYS11 GLY12 VAL13 LYS14 LEU15 ALA16 LEU17 LYS18 SER19 GLU20 GLU21 ARG22 ARG23 GLU24 THR25 VAL26 VAL27 GLU28 VAL29 GLU30 GLY31 VAL32 ARG33 ILE34 GLY35 GLY36 GLY37 SER38 LYS39 ALA40 VAL41 ILE42 ALA43 GLY44 PRO45 CYS46 SER47 VAL48 GLU49 SER50 TRP51 GLU52 GLN53 VAL54 ARG55 GLU56 ALA57 ALA58 LEU59 ALA60 VAL61 LYS62 GLU63 ALA64 GLY65 ALA66 HIS67 MET68 LEU69 ARG70 GLY71 GLY72 ALA73 PHE74 LYS75 PRO76 ARG77 THR78 SER79 PRO80 TYR81 SER82 PHE83 GLN84 GLY85 LEU86 GLY87 LEU88 GLU89 GLY90 LEU91 LYS92 LEU93 LEU94 ARG95 ARG96 ALA97 GLY98 ASP99 GLU100 ALA101 GLY102 LEU103 PRO104 VAL105 VAL106 THR107 GLU108 VAL109 LEU110 ASP111 PRO112 ARG113 HIS114 VAL115 GLU116 THR117 VAL118 SER119 ARG120 TYR121 ALA122 ASP123 MET124 LEU125 GLN126 ILE127 GLY128 ALA129 ARG130 ASN131 MET132 GLN133 ASN134 PHE135 PRO136 LEU137 LEU138 ARG139 GLU140 VAL141 GLY142 ARG143 SER144 GLY145 LYS146 PRO147 VAL148 LEU149 LEU150 LYS151 ARG152 GLY153 PHE154 GLY155 ASN156 THR157 VAL158 GLU159 GLU160 LEU161 LEU162 ALA163 ALA164 ALA165 GLU166 TYR167 ILE168 LEU169 LEU170 GLU171 GLY172 ASN173 TRP174 GLN175 VAL176 VAL177 LEU178 VAL179 GLU180 ARG181 GLY182 ILE183 ARG184 THR185 PHE186 GLU187 PRO188 SER189 THR190 ARG191 PHE192 THR193 LEU194 ASP195 VAL196 ALA197 ALA198 VAL199 ALA200 VAL201 LEU202 LYS203 GLU204 ALA205 THR206 HIS207 LEU208 PRO209 VAL210 ILE211 VAL212 ASP213 PRO214 SER215 HIS216 PRO217 ALA218 GLY219 ARG220 ARG221 SER222 LEU223 VAL224 PRO225 ALA226 LEU227 ALA228 LYS229 ALA230 GLY231 LEU232 ALA233 ALA234 GLY235 ALA236 ASP237 GLY238 LEU239 ILE240 VAL241 GLU242 VAL243 HIS244 PRO245 ASN246 PRO247 GLU248 GLU249 ALA250 LEU251 SER252 ASP253 ALA254 LYS255 GLN256 GLN257 LEU258 THR259 PRO260 GLY261 GLU262 PHE263 ALA264 ARG265 LEU266 MET267 GLY268 GLU269 LEU270 ARG271 TRP272 HIS273 ARG274 LEU275 LEU276

Ligands
Unit 5 MN301 PEP302
Unit 6 MN301 PEP303
Unit 7 MN301 PEP304
Unit 8 MN301 PEP305

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany