1VP5 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF 2,5-DIKETO-D-GLUCONIC ACID REDUCTASE (T FROM THERMOTOGA MARITIMA AT 2.40 A RESOLUTION
• Keywords: TM1009, 2, 5-DIKETO-D-GLUCONIC ACID REDUCTASE (EC 1.1.1.274) STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1VP5	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	A	284	2288	0
2	Protein	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	B	283	2272	0
3	Ligand	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	A	1	0	48
4	Ligand	2,5-DIKETO-D-GLUCONIC ACID REDUCTASE	B	1	0	48
5	Water			233	0	233
total				802	4560	329

Proteins

Unit 1

GLN 2 VAL 3 PRO 4 LYS 5 VAL 6 THR 7 LEU 8 ASN 9 ASN 10 GLY 11 VAL 12 GLU 13 MET 14 PRO 15 ILE 16 LEU 17 GLY 18 TYR 19 GLY 20 VAL 21 PHE 22 GLN 23 ILE 24 PRO 25 PRO 26 GLU 27 LYS 28 THR 29 GLU 30 GLU 31 CYS 32 VAL 33 TYR 34 GLU 35 ALA 36 ILE 37 LYS 38 VAL 39 GLY 40 TYR 41 ARG 42 LEU 43 ILE 44 ASP 45 THR 46 ALA 47 ALA 48 SER 49 TYR 50 MET 51 ASN 52 GLU 53 GLU 54 GLY 55 VAL 56 GLY 57 ARG 58 ALA 59 ILE 60 LYS 61 ARG 62 ALA 63 ILE 64 ASP 65 GLU 66 GLY 67 ILE 68 VAL 69 ARG 70 ARG 71 GLU 72 GLU 73 LEU 74 PHE 75 VAL 76 THR 77 THR 78 LYS 79 LEU 80 TRP 81 VAL 82 SER 83 ASP 84 VAL 85 GLY 86 TYR 87 GLU 88 SER 89 THR 90 LYS 91 LYS 92 ALA 93 PHE 94 GLU 95 LYS 96 SER 97 LEU 98 LYS 99 LYS 100 LEU 101 GLN 102 LEU 103 GLU 104 TYR 105 ILE 106 ASP 107 LEU 108 TYR 109 LEU 110 ILE 111 HIS 112 GLN 113 PRO 114 PHE 115 GLY 116 ASP 117 VAL 118 HIS 119 CYS 120 ALA 121 TRP 122 LYS 123 ALA 124 MET 125 GLU 126 GLU 127 MET 128 TYR 129 LYS 130 ASP 131 GLY 132 LEU 133 VAL 134 ARG 135 ALA 136 ILE 137 GLY 138 VAL 139 SER 140 ASN 141 PHE 142 TYR 143 PRO 144 ASP 145 ARG 146 LEU 147 MET 148 ASP 149 LEU 150 MET 151 VAL 152 HIS 153 HIS 154 GLU 155 ILE 156 VAL 157 PRO 158 ALA 159 VAL 160 ASN 161 GLN 162 ILE 163 GLU 164 ILE 165 HIS 166 PRO 167 PHE 168 TYR 169 GLN 170 ARG 171 GLN 172 GLU 173 GLU 174 ILE 175 GLU 176 PHE 177 MET 178 ARG 179 ASN 180 TYR 181 ASN 182 ILE 183 GLN 184 PRO 185 GLU 186 ALA 187 TRP 188 GLY 189 PRO 190 PHE 191 ALA 192 GLU 193 GLY 194 ARG 195 LYS 196 ASN 197 ILE 198 PHE 199 GLN 200 ASN 201 GLY 202 VAL 203 LEU 204 ARG 205 SER 206 ILE 207 ALA 208 GLU 209 LYS 210 TYR 211 GLY 212 LYS 213 THR 214 VAL 215 ALA 216 GLN 217 VAL 218 ILE 219 LEU 220 ARG 221 TRP 222 LEU 223 THR 224 GLN 225 LYS 226 GLY 227 ILE 228 VAL 229 ALA 230 ILE 231 PRO 232 LYS 233 THR 234 VAL 235 ARG 236 ARG 237 GLU 238 ARG 239 MET 240 LYS 241 GLU 242 ASN 243 ILE 244 SER 245 ILE 246 PHE 247 ASP 248 PHE 249 GLU 250 LEU 251 THR 252 GLN 253 GLU 254 ASP 255 MET 256 GLU 257 LYS 258 ILE 259 ALA 260 THR 261 LEU 262 ASP 263 GLU 264 GLY 265 GLN 266 SER 267 ALA 268 PHE 269 PHE 270 SER 271 HIS 272 ARG 273 ASP 274 PRO 275 GLU 276 VAL 277 VAL 278 LYS 279 TRP 280 ILE 281 CYS 282 SER 283 LEU 284 LYS 285

Unit 2

GLN 2 VAL 3 PRO 4 LYS 5 VAL 6 THR 7 LEU 8 ASN 9 ASN 10 GLY 11 VAL 12 GLU 13 MET 14 PRO 15 ILE 16 LEU 17 GLY 18 TYR 19 GLY 20 VAL 21 PHE 22 GLN 23 ILE 24 PRO 25 PRO 26 GLU 27 LYS 28 THR 29 GLU 30 GLU 31 CYS 32 VAL 33 TYR 34 GLU 35 ALA 36 ILE 37 LYS 38 VAL 39 GLY 40 TYR 41 ARG 42 LEU 43 ILE 44 ASP 45 THR 46 ALA 47 ALA 48 SER 49 TYR 50 MET 51 ASN 52 GLU 53 GLU 54 GLY 55 VAL 56 GLY 57 ARG 58 ALA 59 ILE 60 LYS 61 ARG 62 ALA 63 ILE 64 ASP 65 GLU 66 GLY 67 ILE 68 VAL 69 ARG 70 ARG 71 GLU 72 GLU 73 LEU 74 PHE 75 VAL 76 THR 77 THR 78 LYS 79 LEU 80 TRP 81 VAL 82 SER 83 ASP 84 VAL 85 GLY 86 TYR 87 GLU 88 SER 89 THR 90 LYS 91 LYS 92 ALA 93 PHE 94 GLU 95 LYS 96 SER 97 LEU 98 LYS 99 LYS 100 LEU 101 GLN 102 LEU 103 GLU 104 TYR 105 ILE 106 ASP 107 LEU 108 TYR 109 LEU 110 ILE 111 HIS 112 GLN 113 PRO 114 PHE 115 GLY 116 ASP 117 VAL 118 HIS 119 CYS 120 ALA 121 TRP 122 LYS 123 ALA 124 MET 125 GLU 126 GLU 127 MET 128 TYR 129 LYS 130 ASP 131 GLY 132 LEU 133 VAL 134 ARG 135 ALA 136 ILE 137 GLY 138 VAL 139 SER 140 ASN 141 PHE 142 TYR 143 PRO 144 ASP 145 ARG 146 LEU 147 MET 148 ASP 149 LEU 150 MET 151 VAL 152 HIS 153 HIS 154 GLU 155 ILE 156 VAL 157 PRO 158 ALA 159 VAL 160 ASN 161 GLN 162 ILE 163 GLU 164 ILE 165 HIS 166 PRO 167 PHE 168 TYR 169 GLN 170 ARG 171 GLN 172 GLU 173 GLU 174 ILE 175 GLU 176 PHE 177 MET 178 ARG 179 ASN 180 TYR 181 ASN 182 ILE 183 GLN 184 PRO 185 GLU 186 ALA 187 TRP 188 GLY 189 PRO 190 PHE 191 ALA 192 GLU 193 GLY 194 ARG 195 LYS 196 ASN 197 ILE 198 PHE 199 GLN 200 ASN 201 GLY 202 VAL 203 LEU 204 ARG 205 SER 206 ILE 207 ALA 208 GLU 209 LYS 210 TYR 211 GLY 212 LYS 213 THR 214 VAL 215 ALA 216 GLN 217 VAL 218 ILE 219 LEU 220 ARG 221 TRP 222 LEU 223 THR 224 GLN 225 LYS 226 GLY 227 ILE 228 VAL 229 ALA 230 ILE 231 PRO 232 LYS 233 THR 234 VAL 235 ARG 236 ARG 237 GLU 238 ARG 239 MET 240 LYS 241 GLU 242 ASN 243 ILE 244 SER 245 ILE 246 PHE 247 ASP 248 PHE 249 GLU 250 LEU 251 THR 252 GLN 253 GLU 254 ASP 255 MET 256 GLU 257 LYS 258 ILE 259 ALA 260 THR 261 LEU 262 ASP 263 GLU 264 GLY 265 GLN 266 SER 267 ALA 268 PHE 269 PHE 270 SER 271 HIS 272 ARG 273 ASP 274 PRO 275 GLU 276 VAL 277 VAL 278 LYS 279 TRP 280 ILE 281 CYS 282 SER 283 LEU 284

Ligands

Unit 3	NAP 300
Unit 4	NAP 300