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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE REDUCTASE (TM1520) THERMOTOGA MARITIMA AT 2.27 A RESOLUTION
Keywords TM1520, DIHYDRODIPICOLINATE REDUCTASE, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, JOINT CENTER FOR STRUCTU GENOMICS, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1VM6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIHYDRODIPICOLINATE REDUCTASE  A 215 1667 0
2  Protein   DIHYDRODIPICOLINATE REDUCTASE  B 218 1705 0
3  Protein   DIHYDRODIPICOLINATE REDUCTASE  C 215 1663 0
4  Protein   DIHYDRODIPICOLINATE REDUCTASE  D 217 1695 0
5  Ligand   DIHYDRODIPICOLINATE REDUCTASE  A 3 0 52
6  Ligand   DIHYDRODIPICOLINATE REDUCTASE  B 10 0 102
7  Ligand   DIHYDRODIPICOLINATE REDUCTASE  C 5 0 69
8  Ligand   DIHYDRODIPICOLINATE REDUCTASE  D 3 0 52
9 Water     529 0 529
total       1415 6730 804

Proteins
Unit 1 HIS0 MET1 LYS2 TYR3 GLY4 ILE5 VAL6 GLY7 TYR8 SER9 GLY10 ARG11 MET12 GLY13 GLN14 GLU15 ILE16 GLN17 LYS18 VAL19 PHE20 SER21 GLU22 LYS23 GLY24 HIS25 GLU26 LEU27 VAL28 LEU29 LYS30 VAL31 ASP32 VAL33 ASN34 GLY35 VAL36 GLU37 GLU38 LEU39 ASP40 SER41 PRO42 ASP43 VAL44 VAL45 ILE46 ASP47 PHE48 SER49 SER50 PRO51 GLU52 ALA53 LEU54 PRO55 LYS56 THR57 VAL58 ASP59 LEU60 CYS61 LYS62 LYS63 TYR64 ARG65 ALA66 GLY67 LEU68 VAL69 LEU70 GLY71 THR72 THR73 ALA74 LEU75 LYS76 GLU77 GLU78 HIS79 LEU80 GLN81 MET82 LEU83 ARG84 GLU85 LEU86 SER87 LYS88 GLU89 VAL90 PRO91 VAL92 VAL93 GLN94 ALA95 TYR96 ASN97 PHE98 SER99 ILE100 GLY101 ILE102 ASN103 VAL104 LEU105 LYS106 ARG107 PHE108 LEU109 SER110 GLU111 LEU112 VAL113 LYS114 VAL115 LEU116 GLU117 ASP118 TRP119 ASP120 VAL121 GLU122 ILE123 VAL124 GLU125 THR126 HIS127 HIS128 ARG129 PHE130 LYS131 LYS132 ASP133 ALA134 PRO135 SER136 GLY137 THR138 ALA139 ILE140 LEU141 LEU142 GLU143 SER144 ALA145 LEU146 GLY147 LYS148 SER149 VAL150 PRO151 ILE152 HIS153 SER154 LEU155 ARG156 VAL157 GLY158 GLY159 VAL160 PRO161 GLY162 ASP163 HIS164 VAL165 VAL166 VAL167 PHE168 GLY169 ASN170 ILE171 GLY172 GLU173 THR174 ILE175 GLU176 ILE177 LYS178 HIS179 ARG180 ALA181 ILE182 SER183 ARG184 THR185 VAL186 PHE187 ALA188 ILE189 GLY190 ALA191 LEU192 LYS193 ALA194 ALA195 GLU196 PHE197 LEU198 VAL199 GLY200 LYS201 ASP202 PRO203 GLY204 MET205 TYR206 SER207 PHE208 GLU209 GLU210 VAL211 ILE212 PHE213 GLY214
Unit 2 HIS-4 HIS-3 HIS-2 HIS-1 HIS0 MET1 LYS2 TYR3 GLY4 ILE5 VAL6 GLY7 TYR8 SER9 GLY10 ARG11 MET12 GLY13 GLN14 GLU15 ILE16 GLN17 LYS18 VAL19 PHE20 SER21 GLU22 LYS23 GLY24 HIS25 GLU26 LEU27 VAL28 LEU29 LYS30 VAL31 ASP32 VAL33 ASN34 GLY35 VAL36 GLU37 GLU38 LEU39 ASP40 SER41 PRO42 ASP43 VAL44 VAL45 ILE46 ASP47 PHE48 SER49 SER50 PRO51 GLU52 ALA53 LEU54 PRO55 LYS56 THR57 VAL58 ASP59 LEU60 CYS61 LYS62 LYS63 TYR64 ARG65 ALA66 GLY67 LEU68 VAL69 LEU70 GLY71 THR72 THR73 ALA74 LEU75 LYS76 GLU77 GLU78 HIS79 LEU80 GLN81 MET82 LEU83 ARG84 GLU85 LEU86 SER87 LYS88 GLU89 VAL90 PRO91 VAL92 VAL93 GLN94 ALA95 TYR96 ASN97 PHE98 SER99 ILE100 GLY101 ILE102 ASN103 VAL104 LEU105 LYS106 ARG107 PHE108 LEU109 SER110 GLU111 LEU112 VAL113 LYS114 VAL115 LEU116 GLU117 ASP118 TRP119 ASP120 VAL121 GLU122 ILE123 VAL124 GLU125 THR126 HIS127 HIS128 ARG129 PHE130 LYS131 LYS132 ASP133 ALA134 PRO135 SER136 GLY137 THR138 ALA139 ILE140 LEU141 LEU142 GLU143 SER144 ALA145 LEU146 GLY147 LYS148 SER149 VAL150 PRO151 ILE152 HIS153 SER154 LEU155 ARG156 VAL157 GLY158 GLY159 VAL160 PRO161 GLY162 ASP163 HIS164 VAL165 VAL166 VAL167 PHE168 GLY169 ASN170 ILE171 GLY172 GLU173 THR174 ILE175 GLU176 ILE177 LYS178 HIS179 ARG180 ALA181 ILE182 SER183 ARG184 THR185 VAL186 PHE187 ALA188 ILE189 GLY190 ALA191 LEU192 LYS193 ALA194 ALA195 GLU196 PHE197 LEU198 VAL199 GLY200 LYS201 ASP202 PRO203 GLY204 MET205 TYR206 SER207 PHE208 GLU209 GLU210 VAL211 ILE212 PHE213
Unit 3 MET1 LYS2 TYR3 GLY4 ILE5 VAL6 GLY7 TYR8 SER9 GLY10 ARG11 MET12 GLY13 GLN14 GLU15 ILE16 GLN17 LYS18 VAL19 PHE20 SER21 GLU22 LYS23 GLY24 HIS25 GLU26 LEU27 VAL28 LEU29 LYS30 VAL31 ASP32 VAL33 ASN34 GLY35 VAL36 GLU37 GLU38 LEU39 ASP40 SER41 PRO42 ASP43 VAL44 VAL45 ILE46 ASP47 PHE48 SER49 SER50 PRO51 GLU52 ALA53 LEU54 PRO55 LYS56 THR57 VAL58 ASP59 LEU60 CYS61 LYS62 LYS63 TYR64 ARG65 ALA66 GLY67 LEU68 VAL69 LEU70 GLY71 THR72 THR73 ALA74 LEU75 LYS76 GLU77 GLU78 HIS79 LEU80 GLN81 MET82 LEU83 ARG84 GLU85 LEU86 SER87 LYS88 GLU89 VAL90 PRO91 VAL92 VAL93 GLN94 ALA95 TYR96 ASN97 PHE98 SER99 ILE100 GLY101 ILE102 ASN103 VAL104 LEU105 LYS106 ARG107 PHE108 LEU109 SER110 GLU111 LEU112 VAL113 LYS114 VAL115 LEU116 GLU117 ASP118 TRP119 ASP120 VAL121 GLU122 ILE123 VAL124 GLU125 THR126 HIS127 HIS128 ARG129 PHE130 LYS131 LYS132 ASP133 ALA134 PRO135 SER136 GLY137 THR138 ALA139 ILE140 LEU141 LEU142 GLU143 SER144 ALA145 LEU146 GLY147 LYS148 SER149 VAL150 PRO151 ILE152 HIS153 SER154 LEU155 ARG156 VAL157 GLY158 GLY159 VAL160 PRO161 GLY162 ASP163 HIS164 VAL165 VAL166 VAL167 PHE168 GLY169 ASN170 ILE171 GLY172 GLU173 THR174 ILE175 GLU176 ILE177 LYS178 HIS179 ARG180 ALA181 ILE182 SER183 ARG184 THR185 VAL186 PHE187 ALA188 ILE189 GLY190 ALA191 LEU192 LYS193 ALA194 ALA195 GLU196 PHE197 LEU198 VAL199 GLY200 LYS201 ASP202 PRO203 GLY204 MET205 TYR206 SER207 PHE208 GLU209 GLU210 VAL211 ILE212 PHE213 GLY214 GLY215
Unit 4 HIS-3 HIS-2 HIS-1 HIS0 MET1 LYS2 TYR3 GLY4 ILE5 VAL6 GLY7 TYR8 SER9 GLY10 ARG11 MET12 GLY13 GLN14 GLU15 ILE16 GLN17 LYS18 VAL19 PHE20 SER21 GLU22 LYS23 GLY24 HIS25 GLU26 LEU27 VAL28 LEU29 LYS30 VAL31 ASP32 VAL33 ASN34 GLY35 VAL36 GLU37 GLU38 LEU39 ASP40 SER41 PRO42 ASP43 VAL44 VAL45 ILE46 ASP47 PHE48 SER49 SER50 PRO51 GLU52 ALA53 LEU54 PRO55 LYS56 THR57 VAL58 ASP59 LEU60 CYS61 LYS62 LYS63 TYR64 ARG65 ALA66 GLY67 LEU68 VAL69 LEU70 GLY71 THR72 THR73 ALA74 LEU75 LYS76 GLU77 GLU78 HIS79 LEU80 GLN81 MET82 LEU83 ARG84 GLU85 LEU86 SER87 LYS88 GLU89 VAL90 PRO91 VAL92 VAL93 GLN94 ALA95 TYR96 ASN97 PHE98 SER99 ILE100 GLY101 ILE102 ASN103 VAL104 LEU105 LYS106 ARG107 PHE108 LEU109 SER110 GLU111 LEU112 VAL113 LYS114 VAL115 LEU116 GLU117 ASP118 TRP119 ASP120 VAL121 GLU122 ILE123 VAL124 GLU125 THR126 HIS127 HIS128 ARG129 PHE130 LYS131 LYS132 ASP133 ALA134 PRO135 SER136 GLY137 THR138 ALA139 ILE140 LEU141 LEU142 GLU143 SER144 ALA145 LEU146 GLY147 LYS148 SER149 VAL150 PRO151 ILE152 HIS153 SER154 LEU155 ARG156 VAL157 GLY158 GLY159 VAL160 PRO161 GLY162 ASP163 HIS164 VAL165 VAL166 VAL167 PHE168 GLY169 ASN170 ILE171 GLY172 GLU173 THR174 ILE175 GLU176 ILE177 LYS178 HIS179 ARG180 ALA181 ILE182 SER183 ARG184 THR185 VAL186 PHE187 ALA188 ILE189 GLY190 ALA191 LEU192 LYS193 ALA194 ALA195 GLU196 PHE197 LEU198 VAL199 GLY200 LYS201 ASP202 PRO203 GLY204 MET205 TYR206 SER207 PHE208 GLU209 GLU210 VAL211 ILE212 PHE213

Ligands
Unit 5 ACT217 ACT218 NAD300
Unit 6 ACT217 ACT218 ACT219 ACT220 ACT221 ACT222 NAD300 PG4301 PG4302 PG4303
Unit 7 ACT217 ACT218 NAD300 EDO301 PG4302
Unit 8 ACT217 ACT218 NAD300

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany