1VJ7 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE BIFUNCTIONAL CATALYTIC FRAGMENT OF THE RELA/SPOT HOMOLOG FROM STREPTOCOCCUS EQUISIMILIS.
• Keywords: HD DOMAIN, ALPHA BETA 2-LAYER SANDWICH, HELIX BUNDLE, MANGAN PPG2':3'P, (P)PPGPP, PPGPP, RELA, SPOT, STRINGENT RESPONSE, STRINGENT FACTOR, STRINGENT EFFECTOR, MAGIC SPOT, RSH, HYDR TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1VJ7	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BIFUNCTIONAL RELA/SPOT	A	326	2653	0
2	Protein	BIFUNCTIONAL RELA/SPOT	B	310	2486	0
3	Ligand	BIFUNCTIONAL RELA/SPOT	A	2	0	29
4	Ligand	BIFUNCTIONAL RELA/SPOT	B	3	0	60
5	Water			196	0	196
total				837	5139	285

Proteins

Unit 1

ILE 5 ASN 6 LEU 7 THR 8 GLY 9 GLU 10 GLU 11 VAL 12 VAL 13 ALA 14 LEU 15 ALA 16 ALA 17 LYS 18 TYR 19 MET 20 ASN 21 GLU 22 THR 23 ASP 24 ALA 25 ALA 26 PHE 27 VAL 28 LYS 29 LYS 30 ALA 31 LEU 32 ASP 33 TYR 34 ALA 35 THR 36 ALA 37 ALA 38 HIS 39 PHE 40 TYR 41 GLN 42 VAL 43 ARG 44 LYS 45 SER 46 GLY 47 GLU 48 PRO 49 TYR 50 ILE 51 VAL 52 HIS 53 PRO 54 ILE 55 GLN 56 VAL 57 ALA 58 GLY 59 ILE 60 LEU 61 ALA 62 ASP 63 LEU 64 HIS 65 LEU 66 ASP 67 ALA 68 VAL 69 THR 70 VAL 71 ALA 72 CYS 73 GLY 74 PHE 75 LEU 76 HIS 77 ASP 78 VAL 79 VAL 80 GLU 81 ASP 82 THR 83 ASP 84 ILE 85 THR 86 LEU 87 ASP 88 ASN 89 ILE 90 GLU 91 PHE 92 ASP 93 PHE 94 GLY 95 LYS 96 ASP 97 VAL 98 ARG 99 ASP 100 ILE 101 VAL 102 ASP 103 GLY 104 VAL 105 THR 106 LYS 107 LEU 108 GLY 109 HIS 124 ARG 125 LYS 126 MET 127 LEU 128 MET 129 ALA 130 MET 131 SER 132 LYS 133 ASP 134 ILE 135 ARG 136 VAL 137 ILE 138 LEU 139 VAL 140 LYS 141 LEU 142 ALA 143 ASP 144 ARG 145 LEU 146 HIS 147 ASN 148 MET 149 ARG 150 THR 151 LEU 152 LYS 159 GLN 160 GLU 161 ARG 162 ILE 163 SER 164 ARG 165 GLU 166 THR 167 MET 168 GLU 169 ILE 170 TYR 171 ALA 172 PRO 173 LEU 174 ALA 175 HIS 176 ARG 177 LEU 178 GLY 179 ILE 180 SER 181 ARG 182 ILE 183 LYS 184 TRP 185 GLU 186 LEU 187 GLU 188 ASP 189 LEU 190 ALA 191 PHE 192 ARG 193 TYR 194 LEU 195 ASN 196 GLU 197 THR 198 GLU 199 PHE 200 TYR 201 LYS 202 ILE 203 SER 204 HIS 205 MET 206 MET 207 ASN 208 GLU 209 LYS 210 ARG 211 ARG 212 GLU 213 ARG 214 GLU 215 ALA 216 LEU 217 VAL 218 ASP 219 ASP 220 ILE 221 VAL 222 THR 223 LYS 224 ILE 225 LYS 226 SER 227 TYR 228 THR 229 THR 230 GLU 231 GLN 232 GLY 233 LEU 234 PHE 235 GLY 236 ASP 237 VAL 238 TYR 239 GLY 240 ARG 241 PRO 242 LYS 243 HIS 244 ILE 245 TYR 246 SER 247 ILE 248 TYR 249 ARG 250 LYS 251 MET 252 ARG 253 ASP 254 LYS 255 LYS 256 LYS 257 ARG 258 PHE 259 ASP 260 GLN 261 ILE 262 PHE 263 ASP 264 LEU 265 ILE 266 ALA 267 ILE 268 ARG 269 CYS 270 VAL 271 MET 272 GLU 273 THR 274 GLN 275 SER 276 ASP 277 VAL 278 TYR 279 ALA 280 MET 281 VAL 282 GLY 283 TYR 284 ILE 285 HIS 286 GLU 287 LEU 288 TRP 289 ARG 290 PRO 291 MET 292 PRO 293 GLY 294 ARG 295 PHE 296 LYS 297 ASP 298 TYR 299 ILE 300 ALA 301 ALA 302 PRO 303 LYS 304 ALA 305 ASN 306 GLY 307 TYR 308 GLN 309 SER 310 ILE 311 HIS 312 THR 313 THR 314 VAL 315 TYR 316 GLY 317 PRO 318 LYS 319 GLY 320 PRO 321 ILE 322 GLU 323 ILE 324 GLN 325 ILE 326 ARG 327 THR 328 LYS 329 GLU 330 MET 331 HIS 332 GLN 333 VAL 334 ALA 335 GLU 336 TYR 337 GLY 338 VAL 339 ALA 340 ALA 341 ASN 363 TRP 364 ILE 365 LYS 366 GLU 367 LEU 368 VAL 369 GLU 370 LEU 371

Unit 2

ILE 5 ASN 6 LEU 7 THR 8 GLY 9 GLU 10 GLU 11 VAL 12 VAL 13 ALA 14 LEU 15 ALA 16 ALA 17 LYS 18 TYR 19 MET 20 ASN 21 GLU 22 THR 23 ASP 24 ALA 25 ALA 26 PHE 27 VAL 28 LYS 29 LYS 30 ALA 31 LEU 32 ASP 33 TYR 34 ALA 35 THR 36 ALA 37 ALA 38 HIS 39 PHE 40 TYR 41 GLN 42 VAL 43 ARG 44 LYS 45 SER 46 GLY 47 GLU 48 PRO 49 TYR 50 ILE 51 VAL 52 HIS 53 PRO 54 ILE 55 GLN 56 VAL 57 ALA 58 GLY 59 ILE 60 LEU 61 ALA 62 ASP 63 LEU 64 HIS 65 LEU 66 ASP 67 ALA 68 VAL 69 THR 70 VAL 71 ALA 72 CYS 73 GLY 74 PHE 75 LEU 76 HIS 77 ASP 78 VAL 79 VAL 80 GLU 81 ASP 82 THR 83 ASP 84 ILE 85 THR 86 LEU 87 ASP 88 ASN 89 ILE 90 GLU 91 PHE 92 ASP 93 PHE 94 GLY 95 LYS 96 ASP 97 VAL 98 ARG 99 ASP 100 ILE 101 VAL 102 ASP 103 GLY 104 VAL 105 THR 106 LYS 107 LEU 108 GLY 109 LYS 110 VAL 111 GLU 112 SER 132 LYS 133 ASP 134 ILE 135 ARG 136 VAL 137 ILE 138 LEU 139 VAL 140 LYS 141 LEU 142 ALA 143 ASP 144 ARG 145 LEU 146 HIS 147 ASN 148 MET 149 ARG 150 THR 151 LEU 152 LYS 153 HIS 154 LEU 155 ARG 156 LYS 157 ASP 158 LYS 159 GLN 160 GLU 161 ARG 162 ILE 163 SER 164 ARG 165 GLU 166 THR 167 MET 168 GLU 169 ILE 170 TYR 171 ALA 172 PRO 173 LEU 174 ALA 175 HIS 176 ARG 177 LEU 178 GLY 179 ILE 180 SER 181 ARG 182 ILE 183 LYS 184 TRP 185 GLU 186 LEU 187 GLU 188 ASP 189 LEU 190 ALA 191 PHE 192 ARG 193 TYR 194 LEU 195 ASN 196 GLU 197 THR 198 GLU 199 PHE 200 TYR 201 LYS 202 ILE 203 SER 204 HIS 205 MET 206 MET 207 ASN 208 GLU 209 LYS 210 LEU 217 VAL 218 ASP 219 ASP 220 ILE 221 VAL 222 THR 223 LYS 224 ILE 225 LYS 226 SER 227 TYR 228 THR 229 THR 230 GLU 231 GLN 232 GLY 233 LEU 234 PHE 235 GLY 236 ASP 237 VAL 238 TYR 239 GLY 240 ARG 241 PRO 242 LYS 243 HIS 244 ILE 245 TYR 246 SER 247 ILE 248 TYR 249 ARG 250 LYS 251 MET 252 ARG 253 ILE 262 PHE 263 ASP 264 LEU 265 ILE 266 ALA 267 ILE 268 ARG 269 CYS 270 VAL 271 MET 272 GLU 273 THR 274 GLN 275 SER 276 ASP 277 VAL 278 TYR 279 ALA 280 MET 281 VAL 282 GLY 283 TYR 284 ILE 285 HIS 286 GLU 287 LEU 288 TRP 289 ARG 290 PRO 291 MET 292 PRO 293 GLY 294 ARG 295 PHE 296 LYS 297 ASP 298 TYR 299 ILE 300 ALA 301 ALA 302 PRO 303 LYS 304 ALA 305 ASN 306 GLY 307 TYR 308 GLN 309 SER 310 ILE 311 HIS 312 THR 313 THR 314 VAL 315 TYR 316 GLY 317 PRO 318 LYS 319 GLY 320 PRO 321 ILE 322 GLU 323 ILE 324 GLN 325 ILE 326 ARG 327 THR 328 LYS 329 GLU 330 MET 331 HIS 332 GLN 333 VAL 334 ALA 335 GLU 336 TYR 337 GLY 338 VAL 339 ALA 340 TRP 364 ILE 365 LYS 366 GLU 367 LEU 368 VAL 369 GLU 370

Ligands

Unit 3	MN 997 GDP 998
Unit 4	MN 1997 GDP 1998 GPX 1999