1VDF - Sequence, Chains, Asymmetric and Biological Units

• Title: ASSEMBLY DOMAIN OF CARTILAGE OLIGOMERIC MATRIX PROTEIN
• Keywords: EXTRACELLULAR MATRIX PROTEIN, ASSEMBLY DOMAIN, CARTILAGE, OLIGOMERIC MATRIX PROTEIN, GLYCOPROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1VDF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CARTILAGE OLIGOMERIC MATRIX PROTEIN	A	46	366	0
2	Protein	CARTILAGE OLIGOMERIC MATRIX PROTEIN	B	46	366	0
3	Protein	CARTILAGE OLIGOMERIC MATRIX PROTEIN	C	46	366	0
4	Protein	CARTILAGE OLIGOMERIC MATRIX PROTEIN	D	46	366	0
5	Protein	CARTILAGE OLIGOMERIC MATRIX PROTEIN	E	46	366	0
6	Ligand	CARTILAGE OLIGOMERIC MATRIX PROTEIN	A	1	0	1
7	Water			169	0	169
total				400	1830	170

Proteins

Unit 1	MET 27 ASP 28 LEU 29 ALA 30 PRO 31 GLN 32 MET 33 LEU 34 ARG 35 GLU 36 LEU 37 GLN 38 GLU 39 THR 40 ASN 41 ALA 42 ALA 43 LEU 44 GLN 45 ASP 46 VAL 47 ARG 48 GLU 49 LEU 50 LEU 51 ARG 52 GLN 53 GLN 54 VAL 55 LYS 56 GLU 57 ILE 58 THR 59 PHE 60 LEU 61 LYS 62 ASN 63 THR 64 VAL 65 MET 66 GLU 67 CYS 68 ASP 69 ALA 70 CYS 71 GLY 72
Unit 2	MET 27 ASP 28 LEU 29 ALA 30 PRO 31 GLN 32 MET 33 LEU 34 ARG 35 GLU 36 LEU 37 GLN 38 GLU 39 THR 40 ASN 41 ALA 42 ALA 43 LEU 44 GLN 45 ASP 46 VAL 47 ARG 48 GLU 49 LEU 50 LEU 51 ARG 52 GLN 53 GLN 54 VAL 55 LYS 56 GLU 57 ILE 58 THR 59 PHE 60 LEU 61 LYS 62 ASN 63 THR 64 VAL 65 MET 66 GLU 67 CYS 68 ASP 69 ALA 70 CYS 71 GLY 72
Unit 3	MET 27 ASP 28 LEU 29 ALA 30 PRO 31 GLN 32 MET 33 LEU 34 ARG 35 GLU 36 LEU 37 GLN 38 GLU 39 THR 40 ASN 41 ALA 42 ALA 43 LEU 44 GLN 45 ASP 46 VAL 47 ARG 48 GLU 49 LEU 50 LEU 51 ARG 52 GLN 53 GLN 54 VAL 55 LYS 56 GLU 57 ILE 58 THR 59 PHE 60 LEU 61 LYS 62 ASN 63 THR 64 VAL 65 MET 66 GLU 67 CYS 68 ASP 69 ALA 70 CYS 71 GLY 72
Unit 4	MET 27 ASP 28 LEU 29 ALA 30 PRO 31 GLN 32 MET 33 LEU 34 ARG 35 GLU 36 LEU 37 GLN 38 GLU 39 THR 40 ASN 41 ALA 42 ALA 43 LEU 44 GLN 45 ASP 46 VAL 47 ARG 48 GLU 49 LEU 50 LEU 51 ARG 52 GLN 53 GLN 54 VAL 55 LYS 56 GLU 57 ILE 58 THR 59 PHE 60 LEU 61 LYS 62 ASN 63 THR 64 VAL 65 MET 66 GLU 67 CYS 68 ASP 69 ALA 70 CYS 71 GLY 72
Unit 5	MET 27 ASP 28 LEU 29 ALA 30 PRO 31 GLN 32 MET 33 LEU 34 ARG 35 GLU 36 LEU 37 GLN 38 GLU 39 THR 40 ASN 41 ALA 42 ALA 43 LEU 44 GLN 45 ASP 46 VAL 47 ARG 48 GLU 49 LEU 50 LEU 51 ARG 52 GLN 53 GLN 54 VAL 55 LYS 56 GLU 57 ILE 58 THR 59 PHE 60 LEU 61 LYS 62 ASN 63 THR 64 VAL 65 MET 66 GLU 67 CYS 68 ASP 69 ALA 70 CYS 71 GLY 72

Ligands

Unit 6

CL 500