1VD6 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTE COMPLEXED WITH GLYCEROL
• Keywords: GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE, GLYCEROPHOSPHOD PHOSPHODIESTERASE, THERMUS THERMOPHILUS, HB8, GLYCEROL COMP RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRU GENOMICS, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1VD6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	A	218	1669	0
2	Ligand	GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE	A	1	0	6
3	Water			317	0	317
total				536	1669	323

Proteins

Unit 1

ARG 7 PRO 8 LEU 9 ARG 10 LEU 11 GLY 12 HIS 13 ARG 14 GLY 15 ALA 16 PRO 17 LEU 18 LYS 19 ALA 20 LYS 21 GLU 22 ASN 23 THR 24 LEU 25 GLU 26 SER 27 PHE 28 ARG 29 LEU 30 ALA 31 LEU 32 GLU 33 ALA 34 GLY 35 LEU 36 ASP 37 GLY 38 VAL 39 GLU 40 LEU 41 ASP 42 VAL 43 TRP 44 PRO 45 THR 46 ARG 47 ASP 48 GLY 49 VAL 50 PHE 51 ALA 52 VAL 53 ARG 54 HIS 55 ASP 56 PRO 57 ASP 58 THR 59 PRO 60 LEU 61 GLY 62 PRO 63 VAL 64 PHE 65 GLN 66 VAL 67 ASP 68 TYR 69 ALA 70 ASP 71 LEU 72 LYS 73 ALA 74 GLN 75 GLU 76 PRO 77 ASP 78 LEU 79 PRO 80 ARG 81 LEU 82 GLU 83 GLU 84 VAL 85 LEU 86 ALA 87 LEU 88 LYS 89 GLU 90 ALA 91 PHE 92 PRO 93 GLN 94 ALA 95 VAL 96 PHE 97 ASN 98 VAL 99 GLU 100 LEU 101 LYS 102 SER 103 PHE 104 PRO 105 GLY 106 LEU 107 GLY 108 GLU 109 GLU 110 ALA 111 ALA 112 ARG 113 ARG 114 LEU 115 ALA 116 ALA 117 LEU 118 LEU 119 ARG 120 GLY 121 ARG 122 GLU 123 GLY 124 VAL 125 TRP 126 VAL 127 SER 128 SER 129 PHE 130 ASP 131 PRO 132 LEU 133 ALA 134 LEU 135 LEU 136 ALA 137 LEU 138 ARG 139 LYS 140 ALA 141 ALA 142 PRO 143 GLY 144 LEU 145 PRO 146 LEU 147 GLY 148 PHE 149 LEU 150 MET 151 ALA 152 GLU 153 ASP 154 HIS 155 SER 156 ALA 157 LEU 158 LEU 159 PRO 160 CYS 161 LEU 162 GLY 163 VAL 164 GLU 165 ALA 166 VAL 167 HIS 168 PRO 169 HIS 170 HIS 171 ALA 172 LEU 173 VAL 174 THR 175 GLU 176 GLU 177 ALA 178 VAL 179 ALA 180 GLY 181 TRP 182 ARG 183 LYS 184 ARG 185 GLY 186 LEU 187 PHE 188 VAL 189 VAL 190 ALA 191 TRP 192 THR 193 VAL 194 ASN 195 GLU 196 GLU 197 GLY 198 GLU 199 ALA 200 ARG 201 ARG 202 LEU 203 LEU 204 ALA 205 LEU 206 GLY 207 LEU 208 ASP 209 GLY 210 LEU 211 ILE 212 GLY 213 ASP 214 ARG 215 PRO 216 GLU 217 VAL 218 LEU 219 LEU 220 PRO 221 LEU 222 GLY 223 GLY 224

Ligands

Unit 2

GOL 300