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Title | CRYSTAL STRUCTURE OF A T.THERMOPHILUS HB8 AP6A HYDROLASE NDX | |
Keywords | NUDIX PROTEIN, DIADENOSINE POLYPHOSPHATE, AP6A, THERMUS THER HB8, HYDROLASE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIA RSGI, STRUCTURAL GENOMICS | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1VCD | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | NDX1 | A | 126 | 1001 | 0 |
2 | Protein | NDX1 | B | 126 | 1001 | 0 |
3 | Ligand | NDX1 | A | 2 | 0 | 11 |
4 | Ligand | NDX1 | B | 2 | 0 | 11 |
5 | Water | 183 | 0 | 183 | ||
total | 439 | 2002 | 205 |
Unit 1 | MET1 GLU2 LEU3 GLY4 ALA5 GLY6 GLY7 VAL8 VAL9 PHE10 ASN11 ALA12 LYS13 ARG14 GLU15 VAL16 LEU17 LEU18 LEU19 ARG20 ASP21 ARG22 MET23 GLY24 PHE25 TRP26 VAL27 PHE28 PRO29 LYS30 GLY31 HIS32 PRO33 GLU34 PRO35 GLY36 GLU37 SER38 LEU39 GLU40 GLU41 ALA42 ALA43 VAL44 ARG45 GLU46 VAL47 TRP48 GLU49 GLU50 THR51 GLY52 VAL53 ARG54 ALA55 GLU56 VAL57 LEU58 LEU59 PRO60 LEU61 TYR62 PRO63 THR64 ARG65 TYR66 VAL67 ASN68 PRO69 LYS70 GLY71 VAL72 GLU73 ARG74 GLU75 VAL76 HIS77 TRP78 PHE79 LEU80 MET81 ARG82 GLY83 GLU84 GLY85 ALA86 PRO87 ARG88 LEU89 GLU90 GLU91 GLY92 MET93 THR94 GLY95 ALA96 GLY97 TRP98 PHE99 SER100 PRO101 GLU102 GLU103 ALA104 ARG105 ALA106 LEU107 LEU108 ALA109 PHE110 PRO111 GLU112 ASP113 LEU114 GLY115 LEU116 LEU117 GLU118 VAL119 ALA120 LEU121 GLU122 ARG123 LEU124 PRO125 LEU126 |
Unit 2 | MET1 GLU2 LEU3 GLY4 ALA5 GLY6 GLY7 VAL8 VAL9 PHE10 ASN11 ALA12 LYS13 ARG14 GLU15 VAL16 LEU17 LEU18 LEU19 ARG20 ASP21 ARG22 MET23 GLY24 PHE25 TRP26 VAL27 PHE28 PRO29 LYS30 GLY31 HIS32 PRO33 GLU34 PRO35 GLY36 GLU37 SER38 LEU39 GLU40 GLU41 ALA42 ALA43 VAL44 ARG45 GLU46 VAL47 TRP48 GLU49 GLU50 THR51 GLY52 VAL53 ARG54 ALA55 GLU56 VAL57 LEU58 LEU59 PRO60 LEU61 TYR62 PRO63 THR64 ARG65 TYR66 VAL67 ASN68 PRO69 LYS70 GLY71 VAL72 GLU73 ARG74 GLU75 VAL76 HIS77 TRP78 PHE79 LEU80 MET81 ARG82 GLY83 GLU84 GLY85 ALA86 PRO87 ARG88 LEU89 GLU90 GLU91 GLY92 MET93 THR94 GLY95 ALA96 GLY97 TRP98 PHE99 SER100 PRO101 GLU102 GLU103 ALA104 ARG105 ALA106 LEU107 LEU108 ALA109 PHE110 PRO111 GLU112 ASP113 LEU114 GLY115 LEU116 LEU117 GLU118 VAL119 ALA120 LEU121 GLU122 ARG123 LEU124 PRO125 LEU126 |
Unit 3 | SO41002 GOL2001 |
Unit 4 | SO41001 GOL2002 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |