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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ARTOCARPIN-MANNOTRIOSE COMPLEX
Keywords BETA-PRISM, MANNOSE-SPECIFIC, LECTIN, JACALIN-LIKE, PLANT PR
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1VBO     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ARTOCARPIN  A 149 1133 8
2  Protein   ARTOCARPIN  B 149 1133 8
3  Protein   ARTOCARPIN  C 149 1133 8
4  Protein   ARTOCARPIN  D 149 1133 8
5  Protein   ARTOCARPIN  E 149 1133 8
6  Protein   ARTOCARPIN  F 149 1133 8
7  Protein   ARTOCARPIN  G 149 1133 8
8  Protein   ARTOCARPIN  H 149 1133 8
9  Ligand    I 3 0 34
10  Ligand    J 3 0 34
11  Ligand    K 3 0 34
12  Ligand    L 3 0 34
13  Ligand    M 3 0 34
14  Ligand    N 3 0 34
15  Ligand   ARTOCARPIN  D 1 0 12
16  Ligand   ARTOCARPIN  F 1 0 12
17 Water     490 0 490
total       1702 9064 782
Proteins
Unit 1 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 2 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 3 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 4 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 5 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 6 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 7 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Unit 8 AYA1 SER2 GLN3 THR4 ILE5 THR6 VAL7 GLY8 PRO9 TRP10 GLY11 GLY12 PRO13 GLY14 GLY15 ASN16 GLY17 TRP18 ASP19 ASP20 GLY21 SER22 TYR23 THR24 GLY25 ILE26 ARG27 GLN28 ILE29 GLU30 LEU31 SER32 TYR33 LYS34 GLU35 ALA36 ILE37 GLY38 SER39 PHE40 SER41 VAL42 ILE43 TYR44 ASP45 LEU46 ASN47 GLY48 ASP49 PRO50 PHE51 SER52 GLY53 PRO54 LYS55 HIS56 THR57 SER58 LYS59 LEU60 PRO61 TYR62 LYS63 ASN64 VAL65 LYS66 ILE67 GLU68 LEU69 LYS70 PHE71 PRO72 ASP73 GLU74 PHE75 LEU76 GLU77 SER78 VAL79 SER80 GLY81 TYR82 THR83 GLY84 PRO85 PHE86 SER87 ALA88 LEU89 ALA90 THR91 PRO92 THR93 PRO94 VAL95 VAL96 ARG97 SER98 LEU99 THR100 PHE101 LYS102 THR103 ASN104 LYS105 GLY106 ARG107 THR108 PHE109 GLY110 PRO111 TYR112 GLY113 ASP114 GLU115 GLU116 GLY117 THR118 TYR119 PHE120 ASN121 LEU122 PRO123 ILE124 GLU125 ASN126 GLY127 LEU128 ILE129 VAL130 GLY131 PHE132 LYS133 GLY134 ARG135 THR136 GLY137 ASP138 LEU139 LEU140 ASP141 ALA142 ILE143 GLY144 ILE145 HIS146 MET147 SER148 LEU149
Ligands
Unit 9 MAN1 MAN2 MAN3
Unit 10 MAN1 MAN2 MAN3
Unit 11 MAN1 MAN2 MAN3
Unit 12 MAN1 MAN2 MAN3
Unit 13 MAN1 MAN2 MAN3
Unit 14 MAN1 MAN2 MAN3
Unit 15 MAN1405
Unit 16 MAN2405
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany