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Sequence, Chains, Asymmetric and Biological Units

Title PYRUVATE PHOSPHATE DIKINASE WITH BOUND MG-PEP FROM MAIZE
Keywords TRANSFERASE, MAIZE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INI RSGI, STRUCTURAL GENOMICS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1VBH     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PYRUVATE,ORTHOPHOSPHATE DIKINASE  A 862 6385 0
2  Ligand   PYRUVATE,ORTHOPHOSPHATE DIKINASE  A 3 0 16
3 Water     194 0 194
total       1059 6385 210

Proteins
Unit 1 LYS3 LYS4 ARG5 VAL6 PHE7 HIS8 PHE9 GLY10 LYS11 GLY12 LYS13 SER14 GLU15 GLY16 ASN17 LYS18 THR19 MET20 LYS21 GLU22 LEU23 LEU24 GLY25 GLY26 LYS27 GLY28 ALA29 ASN30 LEU31 ALA32 GLU33 MET34 ALA35 SER36 ILE37 GLY38 LEU39 SER40 VAL41 PRO42 PRO43 GLY44 PHE45 THR46 VAL47 SER48 THR49 GLU50 ALA51 CYS52 GLN53 GLN54 TYR55 GLN56 ASP57 ALA58 GLY59 CYS60 ALA61 LEU62 PRO63 ALA64 GLY65 LEU66 TRP67 ALA68 GLU69 ILE70 VAL71 ASP72 GLY73 LEU74 GLN75 TRP76 VAL77 GLU78 GLU79 TYR80 MET81 GLY82 ALA83 THR84 LEU85 GLY86 ASP87 PRO88 GLN89 ARG90 PRO91 LEU92 LEU93 LEU94 SER95 VAL96 ARG97 SER98 GLY99 ALA100 ALA101 VAL102 SER103 MET104 PRO105 GLY106 MET107 MET108 ASP109 THR110 VAL111 LEU112 ASN113 LEU114 GLY115 LEU116 ASN117 ASP118 GLU119 VAL120 ALA121 ALA122 GLY123 LEU124 ALA125 ALA126 LYS127 SER128 GLY129 GLU130 ARG131 PHE132 ALA133 TYR134 ASP135 SER136 PHE137 ARG138 ARG139 PHE140 LEU141 ASP142 MET143 PHE144 GLY145 ASN146 VAL147 VAL148 MET149 ASP150 ILE151 PRO152 ARG153 SER154 LEU155 PHE156 GLU157 GLU158 LYS159 LEU160 GLU161 HIS162 MET163 LYS164 GLU165 SER166 LYS167 GLY168 LEU169 LYS170 ASN171 ASP172 THR173 ASP174 LEU175 THR176 ALA177 SER178 ASP179 LEU180 LYS181 GLU182 LEU183 VAL184 GLY185 GLN186 TYR187 LYS188 GLU189 VAL190 TYR191 LEU192 SER193 ALA194 LYS195 GLY196 GLU197 PRO198 PHE199 PRO200 SER201 ASP202 PRO203 LYS204 LYS205 GLN206 LEU207 GLU208 LEU209 ALA210 VAL211 LEU212 ALA213 VAL214 PHE215 ASN216 SER217 TRP218 GLU219 SER220 PRO221 ARG222 ALA223 LYS224 LYS225 TYR226 ARG227 SER228 ILE229 ASN230 GLN231 ILE232 THR233 GLY234 LEU235 ARG236 GLY237 THR238 ALA239 VAL240 ASN241 VAL242 GLN243 CYS244 MET245 VAL246 PHE247 GLY248 ASN249 MET250 GLY251 ASN252 THR253 SER254 GLY255 THR256 GLY257 VAL258 LEU259 PHE260 THR261 ARG262 ASN263 PRO264 ASN265 THR266 GLY267 GLU268 LYS269 LYS270 LEU271 TYR272 GLY273 GLU274 PHE275 LEU276 VAL277 ASN278 ALA279 ARG289 THR290 PRO291 GLU292 ASP293 LEU294 ASP295 ALA296 MET297 LYS298 ASN299 LEU300 MET301 PRO302 GLN303 ALA304 TYR305 ASP306 GLU307 LEU308 VAL309 GLU310 ASN311 CYS312 ASN313 ILE314 LEU315 GLU316 SER317 HIS318 TYR319 LYS320 GLU321 MET322 GLN323 ASP324 ILE325 GLU326 PHE327 THR328 VAL329 GLN330 GLU331 ASN332 ARG333 LEU334 TRP335 MET336 LEU337 GLN338 CYS339 ARG340 THR341 GLY342 LYS343 ARG344 THR345 GLY346 LYS347 SER348 ALA349 VAL350 LYS351 ILE352 ALA353 VAL354 ASP355 MET356 VAL357 ASN358 GLU359 GLY360 LEU361 VAL362 GLU363 PRO364 ARG365 SER366 ALA367 ILE368 LYS369 MET370 VAL371 GLU372 PRO373 GLY374 HIS375 LEU376 ASP377 GLN378 LEU379 LEU380 HIS381 PRO382 GLN383 PHE384 GLU385 ASN386 PRO387 SER388 ALA389 TYR390 LYS391 ASP392 GLN393 VAL394 ILE395 ALA396 THR397 GLY398 LEU399 PRO400 ALA401 SER402 PRO403 GLY404 ALA405 ALA406 VAL407 GLY408 GLN409 VAL410 VAL411 PHE412 THR413 ALA414 GLU415 ASP416 ALA417 GLU418 ALA419 TRP420 HIS421 SER422 GLN423 GLY424 LYS425 ALA426 ALA427 ILE428 LEU429 VAL430 ARG431 ALA432 GLU433 THR434 SER435 PRO436 GLU437 ASP438 VAL439 GLY440 GLY441 MET442 HIS443 ALA444 ALA445 VAL446 GLY447 ILE448 LEU449 THR450 GLU451 MET455 THR456 SER457 HIS458 ALA459 ALA460 VAL461 VAL462 ALA463 ARG464 GLY465 TRP466 GLY467 LYS468 CYS469 CYS470 VAL471 SER472 GLY473 CYS474 SER475 GLY476 ILE477 ARG478 VAL479 ASN480 ASP481 ALA482 GLU483 LYS484 LEU485 VAL486 THR487 ILE488 GLY489 GLY490 HIS491 VAL492 LEU493 ARG494 GLU495 GLY496 GLU497 TRP498 LEU499 SER500 LEU501 ASN502 GLY503 SER504 THR505 GLY506 GLU507 VAL508 ILE509 LEU510 GLY511 LYS512 GLN513 PRO514 LEU515 SER516 PRO517 PRO518 ALA519 LEU520 SER521 GLY522 ASP523 LEU524 GLY525 THR526 PHE527 MET528 ALA529 TRP530 VAL531 ASP532 ASP533 VAL534 ARG535 LYS536 LEU537 LYS538 VAL539 LEU540 ALA541 ASN542 ALA543 ASP544 THR545 PRO546 ASP547 ASP548 ALA549 LEU550 THR551 ALA552 ARG553 ASN554 ASN555 GLY556 ALA557 GLN558 GLY559 ILE560 GLY561 LEU562 CYS563 ARG564 THR565 GLU566 HIS567 MET568 PHE569 PHE570 ALA571 SER572 ASP573 GLU574 ARG575 ILE576 LYS577 ALA578 VAL579 ARG580 GLN581 MET582 ILE583 MET584 ALA585 PRO586 THR587 LEU588 GLU589 LEU590 ARG591 GLN592 GLN593 ALA594 LEU595 ASP596 ARG597 LEU598 LEU599 PRO600 TYR601 GLN602 ARG603 SER604 ASP605 PHE606 GLU607 GLY608 ILE609 PHE610 ARG611 ALA612 MET613 ASP614 GLY615 LEU616 PRO617 VAL618 THR619 ILE620 ARG621 LEU622 LEU623 ASP624 PRO625 PRO626 LEU627 HIS628 GLU629 PHE630 LEU631 PRO632 GLU633 GLY634 ASN635 ILE636 GLU637 ASP638 ILE639 VAL640 SER641 GLU642 LEU643 CYS644 ALA645 GLU646 THR647 GLY648 ALA649 ASN650 GLN651 GLU652 ASP653 ALA654 LEU655 ALA656 ARG657 ILE658 GLU659 LYS660 LEU661 SER662 GLU663 VAL664 ASN665 PRO666 MET667 LEU668 GLY669 PHE670 ARG671 GLY672 CYS673 ARG674 LEU675 GLY676 ILE677 SER678 TYR679 PRO680 GLU681 LEU682 THR683 GLU684 MET685 GLN686 ALA687 ARG688 ALA689 ILE690 PHE691 GLU692 ALA693 ALA694 ILE695 ALA696 MET697 THR698 ASN699 GLN700 GLY701 VAL702 GLN703 VAL704 PHE705 PRO706 GLU707 ILE708 MET709 VAL710 PRO711 LEU712 VAL713 GLY714 THR715 PRO716 GLN717 GLU718 LEU719 GLY720 HIS721 GLN722 VAL723 THR724 LEU725 ILE726 ARG727 GLN728 VAL729 ALA730 GLU731 LYS732 VAL733 PHE734 ALA735 ASN736 VAL737 GLY738 LYS739 THR740 ILE741 GLY742 TYR743 LYS744 VAL745 GLY746 THR747 MET748 ILE749 GLU750 ILE751 PRO752 ARG753 ALA754 ALA755 LEU756 VAL757 ALA758 ASP759 GLU760 ILE761 ALA762 GLU763 GLN764 ALA765 GLU766 PHE767 PHE768 SER769 PHE770 GLY771 THR772 ASN773 ASP774 LEU775 THR776 GLN777 MET778 THR779 PHE780 GLY781 TYR782 SER783 ARG784 ASP785 ASP786 VAL787 GLY788 LYS789 PHE790 ILE791 PRO792 VAL793 TYR794 LEU795 ALA796 GLN797 GLY798 ILE799 LEU800 GLN801 HIS802 ASP803 PRO804 PHE805 GLU806 VAL807 LEU808 ASP809 GLN810 ARG811 GLY812 VAL813 GLY814 GLU815 LEU816 VAL817 LYS818 PHE819 ALA820 THR821 GLU822 ARG823 GLY824 ARG825 LYS826 ALA827 ARG828 PRO829 ASN830 LEU831 LYS832 VAL833 GLY834 ILE835 CYS836 GLY837 GLU838 HIS839 GLY840 GLY841 GLU842 PRO843 SER844 SER845 VAL846 ALA847 PHE848 PHE849 ALA850 LYS851 ALA852 GLY853 LEU854 ASP855 TYR856 VAL857 SER858 CYS859 SER860 PRO861 PHE862 ARG863 VAL864 PRO865 ILE866 ALA867 ARG868 LEU869 ALA870 ALA871 ALA872 GLN873 VAL874 LEU875 VAL876

Ligands
Unit 2 MG2000 PEP3000 SO43001

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany