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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF BLUEFIN TUNA HEMOGLOBIN DEOXY FORM AT PH7.5
Keywords OXYGEN TRANSPORT, HEME, RESPIRATORY PROTEIN, ERYTHROCYTE, ROOT EFFECT, SWIM BLADDER, OXYGEN STORAGE/TRANSPORT COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1V4W     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HEMOGLOBIN ALPHA CHAIN  A 144 1085 3
2  Protein   HEMOGLOBIN BETA CHAIN  B 146 1143 0
3  Protein   HEMOGLOBIN ALPHA CHAIN  C 144 1085 3
4  Protein   HEMOGLOBIN BETA CHAIN  D 146 1143 0
5  Ligand   HEMOGLOBIN ALPHA CHAIN  A 1 0 43
6  Ligand   HEMOGLOBIN BETA CHAIN  B 1 0 43
7  Ligand   HEMOGLOBIN ALPHA CHAIN  C 1 0 43
8  Ligand   HEMOGLOBIN BETA CHAIN  D 1 0 43
9 Water     209 0 209
total       793 4456 387

Proteins
Unit 1 ACE0 THR1 THR2 LEU3 SER4 ASP5 LYS6 ASP7 LYS8 SER9 THR10 VAL11 LYS12 ALA13 LEU14 TRP15 GLY16 LYS17 ILE18 SER19 LYS20 SER21 ALA22 ASP23 ALA24 ILE25 GLY26 ALA27 ASP28 ALA29 LEU30 GLY31 ARG32 MET33 LEU34 ALA35 VAL36 TYR37 PRO38 GLN39 THR40 LYS41 THR42 TYR43 PHE44 SER45 HIS46 TRP47 PRO48 ASP49 MET50 SER51 PRO52 GLY53 SER54 GLY55 PRO56 VAL57 LYS58 ALA59 HIS60 GLY61 LYS62 LYS63 VAL64 MET65 GLY66 GLY67 VAL68 ALA69 LEU70 ALA71 VAL72 SER73 LYS74 ILE75 ASP76 ASP77 LEU78 THR79 THR80 GLY81 LEU82 GLY83 ASP84 LEU85 SER86 GLU87 LEU88 HIS89 ALA90 PHE91 LYS92 MET93 ARG94 VAL95 ASP96 PRO97 SER98 ASN99 PHE100 LYS101 ILE102 LEU103 SER104 HIS105 CYS106 ILE107 LEU108 VAL109 VAL110 VAL111 ALA112 LYS113 MET114 PHE115 PRO116 LYS117 GLU118 PHE119 THR120 PRO121 ASP122 ALA123 HIS124 VAL125 SER126 LEU127 ASP128 LYS129 PHE130 LEU131 ALA132 SER133 VAL134 ALA135 LEU136 ALA137 LEU138 ALA139 GLU140 ARG141 TYR142 ARG143
Unit 2 VAL1 GLU2 TRP3 THR4 GLN5 GLN6 GLU7 ARG8 SER9 ILE10 ILE11 ALA12 GLY13 ILE14 PHE15 ALA16 ASN17 LEU18 ASN19 TYR20 GLU21 ASP22 ILE23 GLY24 PRO25 LYS26 ALA27 LEU28 ALA29 ARG30 CYS31 LEU32 ILE33 VAL34 TYR35 PRO36 TRP37 THR38 GLN39 ARG40 TYR41 PHE42 GLY43 ALA44 TYR45 GLY46 ASP47 LEU48 SER49 THR50 PRO51 ASP52 ALA53 ILE54 LYS55 GLY56 ASN57 ALA58 LYS59 ILE60 ALA61 ALA62 HIS63 GLY64 VAL65 LYS66 VAL67 LEU68 HIS69 GLY70 LEU71 ASP72 ARG73 ALA74 VAL75 LYS76 ASN77 MET78 ASP79 ASN80 ILE81 ASN82 GLU83 ALA84 TYR85 SER86 GLU87 LEU88 SER89 VAL90 LEU91 HIS92 SER93 ASP94 LYS95 LEU96 HIS97 VAL98 ASP99 PRO100 ASP101 ASN102 PHE103 ARG104 ILE105 LEU106 GLY107 ASP108 CYS109 LEU110 THR111 VAL112 VAL113 ILE114 ALA115 ALA116 ASN117 LEU118 GLY119 ASP120 ALA121 PHE122 THR123 VAL124 GLU125 THR126 GLN127 CYS128 ALA129 PHE130 GLN131 LYS132 PHE133 LEU134 ALA135 VAL136 VAL137 VAL138 PHE139 ALA140 LEU141 GLY142 ARG143 LYS144 TYR145 HIS146
Unit 3 ACE0 THR1 THR2 LEU3 SER4 ASP5 LYS6 ASP7 LYS8 SER9 THR10 VAL11 LYS12 ALA13 LEU14 TRP15 GLY16 LYS17 ILE18 SER19 LYS20 SER21 ALA22 ASP23 ALA24 ILE25 GLY26 ALA27 ASP28 ALA29 LEU30 GLY31 ARG32 MET33 LEU34 ALA35 VAL36 TYR37 PRO38 GLN39 THR40 LYS41 THR42 TYR43 PHE44 SER45 HIS46 TRP47 PRO48 ASP49 MET50 SER51 PRO52 GLY53 SER54 GLY55 PRO56 VAL57 LYS58 ALA59 HIS60 GLY61 LYS62 LYS63 VAL64 MET65 GLY66 GLY67 VAL68 ALA69 LEU70 ALA71 VAL72 SER73 LYS74 ILE75 ASP76 ASP77 LEU78 THR79 THR80 GLY81 LEU82 GLY83 ASP84 LEU85 SER86 GLU87 LEU88 HIS89 ALA90 PHE91 LYS92 MET93 ARG94 VAL95 ASP96 PRO97 SER98 ASN99 PHE100 LYS101 ILE102 LEU103 SER104 HIS105 CYS106 ILE107 LEU108 VAL109 VAL110 VAL111 ALA112 LYS113 MET114 PHE115 PRO116 LYS117 GLU118 PHE119 THR120 PRO121 ASP122 ALA123 HIS124 VAL125 SER126 LEU127 ASP128 LYS129 PHE130 LEU131 ALA132 SER133 VAL134 ALA135 LEU136 ALA137 LEU138 ALA139 GLU140 ARG141 TYR142 ARG143
Unit 4 VAL1 GLU2 TRP3 THR4 GLN5 GLN6 GLU7 ARG8 SER9 ILE10 ILE11 ALA12 GLY13 ILE14 PHE15 ALA16 ASN17 LEU18 ASN19 TYR20 GLU21 ASP22 ILE23 GLY24 PRO25 LYS26 ALA27 LEU28 ALA29 ARG30 CYS31 LEU32 ILE33 VAL34 TYR35 PRO36 TRP37 THR38 GLN39 ARG40 TYR41 PHE42 GLY43 ALA44 TYR45 GLY46 ASP47 LEU48 SER49 THR50 PRO51 ASP52 ALA53 ILE54 LYS55 GLY56 ASN57 ALA58 LYS59 ILE60 ALA61 ALA62 HIS63 GLY64 VAL65 LYS66 VAL67 LEU68 HIS69 GLY70 LEU71 ASP72 ARG73 ALA74 VAL75 LYS76 ASN77 MET78 ASP79 ASN80 ILE81 ASN82 GLU83 ALA84 TYR85 SER86 GLU87 LEU88 SER89 VAL90 LEU91 HIS92 SER93 ASP94 LYS95 LEU96 HIS97 VAL98 ASP99 PRO100 ASP101 ASN102 PHE103 ARG104 ILE105 LEU106 GLY107 ASP108 CYS109 LEU110 THR111 VAL112 VAL113 ILE114 ALA115 ALA116 ASN117 LEU118 GLY119 ASP120 ALA121 PHE122 THR123 VAL124 GLU125 THR126 GLN127 CYS128 ALA129 PHE130 GLN131 LYS132 PHE133 LEU134 ALA135 VAL136 VAL137 VAL138 PHE139 ALA140 LEU141 GLY142 ARG143 LYS144 TYR145 HIS146

Ligands
Unit 5 HEM144
Unit 6 HEM147
Unit 7 HEM144
Unit 8 HEM147

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany