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Title | STRUCTURE OF A THROMBOSPONDIN C-TERMINAL FRAGMENT REVEALS A CALCIUM CORE IN THE TYPE 3 REPEATS | |
Keywords | EXTRACELLULAR MATRIX, CALCIUM BINDING, L-TYPE LECTIN, GLYCOP CELL ADHESION, CALCIUM-BINDING, HEPARIN-BINDING, EGF-LIKE D | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1UX6 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | THROMBOSPONDIN-1 | A | 335 | 2667 | 0 |
2 | Ligand | THROMBOSPONDIN-1 | A | 16 | 0 | 16 |
3 | Water | 262 | 0 | 262 | ||
total | 613 | 2667 | 278 |
Unit 1 | ALA813 LEU814 ALA815 ASP816 ASN817 CYS818 PRO819 LEU820 GLU821 HIS822 ASN823 PRO824 ASP825 GLN826 LEU827 ASP828 SER829 ASP830 SER831 ASP832 ARG833 ILE834 GLY835 ASP836 THR837 CYS838 ASP839 ASN840 ASN841 GLN842 ASP843 ILE844 ASP845 GLU846 ASP847 GLY848 HIS849 GLN850 ASN851 ASN852 LEU853 ASP854 ASN855 CYS856 PRO857 TYR858 VAL859 PRO860 ASN861 ALA862 ASN863 GLN864 ALA865 ASP866 HIS867 ASP868 LYS869 ASP870 GLY871 LYS872 GLY873 ASP874 ALA875 CYS876 ASP877 HIS878 ASP879 ASP880 ASP881 ASN882 ASP883 GLY884 ILE885 PRO886 ASP887 ASP888 LYS889 ASP890 ASN891 CYS892 ARG893 LEU894 VAL895 PRO896 ASN897 PRO898 ASP899 GLN900 LYS901 ASP902 SER903 ASP904 GLY905 ASP906 GLY907 ARG908 GLY909 ASP910 ALA911 CYS912 LYS913 ASP914 ASP915 PHE916 ASP917 HIS918 ASP919 SER920 VAL921 PRO922 ASP923 ILE924 ASP925 ASP926 ILE927 CYS928 PRO929 GLU930 ASN931 VAL932 ASP933 ILE934 SER935 GLU936 THR937 ASP938 PHE939 ARG940 ARG941 PHE942 GLN943 MET944 ILE945 PRO946 LEU947 ASP948 PRO949 LYS950 GLY951 THR952 SER953 GLN954 ASN955 ASP956 PRO957 ASN958 TRP959 VAL960 VAL961 GLU967 LEU968 VAL969 GLN970 THR971 VAL972 ASN973 SER974 ASP975 PRO976 GLY977 LEU978 ALA979 VAL980 GLY981 TYR982 ASP983 GLU984 PHE985 ASN986 ALA987 VAL988 ASP989 PHE990 SER991 GLY992 THR993 PHE994 PHE995 ILE996 ASN997 THR998 GLU999 ARG1000 ASP1001 ASP1002 ASP1003 TYR1004 ALA1005 GLY1006 PHE1007 VAL1008 PHE1009 GLY1010 TYR1011 GLN1012 SER1013 SER1014 SER1015 ARG1016 PHE1017 TYR1018 VAL1019 VAL1020 MET1021 TRP1022 LYS1023 GLN1024 VAL1025 THR1026 GLN1027 SER1028 TYR1029 TRP1030 ASP1031 THR1032 ASN1033 PRO1034 THR1035 ARG1036 ALA1037 GLN1038 GLY1039 TYR1040 SER1041 GLY1042 LEU1043 SER1044 VAL1045 LYS1046 VAL1047 VAL1048 LYS1049 SER1050 THR1051 THR1052 GLY1053 PRO1054 GLY1055 GLU1056 HIS1057 LEU1058 ARG1059 ASN1060 ALA1061 LEU1062 TRP1063 HIS1064 THR1065 GLY1066 ASN1067 THR1068 PRO1069 GLY1070 GLN1071 VAL1072 ARG1073 THR1074 LEU1075 TRP1076 HIS1077 ASP1078 PRO1079 ARG1080 HIS1081 ILE1082 GLY1083 TRP1084 LYS1085 ASP1086 PHE1087 THR1088 ALA1089 TYR1090 ARG1091 TRP1092 ARG1093 LEU1094 SER1095 HIS1096 ARG1097 PRO1098 LYS1099 THR1100 GLY1101 PHE1102 ILE1103 ARG1104 VAL1105 VAL1106 MET1107 TYR1108 GLU1109 GLY1110 LYS1111 LYS1112 ILE1113 MET1114 ALA1115 ASP1116 SER1117 GLY1118 PRO1119 ILE1120 TYR1121 ASP1122 LYS1123 THR1124 TYR1125 ALA1126 GLY1127 GLY1128 ARG1129 LEU1130 GLY1131 LEU1132 PHE1133 VAL1134 PHE1135 SER1136 GLN1137 GLU1138 MET1139 VAL1140 PHE1141 PHE1142 SER1143 ASP1144 LEU1145 LYS1146 TYR1147 GLU1148 CYS1149 ARG1150 ASP1151 PRO1152 |
Unit 2 | CA2001 CA2002 CA2003 CA2004 CA2005 CA2006 CA2007 CA2008 CA2009 CA2010 CA2011 CA2012 CA2013 CA2014 CA2015 CA2016 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |